Fumaric acid_HEC-1-A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in HEC-1-A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_HEC-1-A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.184797
EEF2 eukaryotic translation elongation factor 2 0.146581
FLNA filamin A, alpha 0.124131
IGFBP3 insulin-like growth factor binding protein 3 0.116307
PLEC plectin 0.114892
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.101029
NDRG1 N-myc downstream regulated 1 0.0999608
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0943767
TMSB10 thymosin beta 10 0.0791335
LAMB3 laminin, beta 3 0.0702822
PAX8 paired box 8 0.0693043
PGK1 phosphoglycerate kinase 1 0.0678698
APP amyloid beta (A4) precursor protein 0.0671047
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0647159
FTH1 ferritin, heavy polypeptide 1 0.0631808
SRRM2 serine/arginine repetitive matrix 2 0.0611579
TMSB4X thymosin beta 4, X-linked 0.06091
MT2A metallothionein 2A 0.0584384
FLNB filamin B, beta 0.0559107
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0557859
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0526874
SMAD3 SMAD family member 3 0.0519943
KRT7 keratin 7, type II 0.0518428
TNIP1 TNFAIP3 interacting protein 1 0.049791
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0484428
CALR calreticulin 0.0477862
LOC112694756 uncharaterized LOC112694756 0.0463828
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0463108
ANXA2 annexin A2 0.045698
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0450115
VEGFA vascular endothelial growth factor A 0.0446672
PTPRF protein tyrosine phosphatase, receptor type, F 0.0436388
RPL3 ribosomal protein L3 0.0417952
RPL23 ribosomal protein L23 0.0407883
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0405696
DDIT4 DNA-damage-inducible transcript 4 0.039955
MIDEAS mitotic deacetylase associated SANT domain protein 0.0395637
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0378394
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0377573
AHNAK2 AHNAK nucleoprotein 2 0.0372522
SHB Src homology 2 domain containing adaptor protein B 0.0372429
TRIO trio Rho guanine nucleotide exchange factor 0.036754
AHNAK AHNAK nucleoprotein 0.0365807
BHLHE40 basic helix-loop-helix family, member e40 0.0365797
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0365174
HELZ helicase with zinc finger 0.0364804
PTMA prothymosin, alpha 0.0358759
EIF4H eukaryotic translation initiation factor 4H 0.0354966
ACTN4 actinin, alpha 4 0.0353465
INSIG2 insulin induced gene 2 0.0347176
EEF1G eukaryotic translation elongation factor 1 gamma 0.0332903
YEATS2 YEATS domain containing 2 0.0331251
MINK1 misshapen-like kinase 1 0.0327041
CTBP2 C-terminal binding protein 2 0.0326603
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0324014
EPHA2 EPH receptor A2 0.0322647
NUMA1 nuclear mitotic apparatus protein 1 0.0318534
ENO1 enolase 1, (alpha) 0.0317962
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0314248
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0307278
KRT18 keratin 18, type I 0.0306126
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0304692
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0297328
RASA3 RAS p21 protein activator 3 0.0293758
MED15 mediator complex subunit 15 0.0293391
PLAU plasminogen activator, urokinase 0.0292641
AMOTL2 angiomotin like 2 0.0290962
AKAP12 A kinase (PRKA) anchor protein 12 0.0288895
RPL35A ribosomal protein L35a 0.0288834
OGA O-GlcNAcase 0.028424
NIBAN2 niban apoptosis regulator 2 0.0283733
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0282363
YBX1 Y box binding protein 1 0.0280867
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0277814
ANKRD11 ankyrin repeat domain 11 0.027603
CEP250 centrosomal protein 250kDa 0.0266233
MACF1 microtubule-actin crosslinking factor 1 0.026067
TPM3 tropomyosin 3 0.0256352
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0256219
HSPG2 heparan sulfate proteoglycan 2 0.0256046
ANXA11 annexin A11 0.0255677
WDR45B WD repeat domain 45B 0.0255546
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0254899
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0254283
NEK6 NIMA-related kinase 6 0.0250112
SEPTIN2 septin 2 0.024975
ACTG1 actin gamma 1 0.0249276
EIF4B eukaryotic translation initiation factor 4B 0.0244708
RAD23B RAD23 homolog B (S. cerevisiae) 0.0244235
HILPDA hypoxia inducible lipid droplet-associated 0.0243994
PRELID2 PRELI domain containing 2 0.0243731
KIRREL1 kirre like nephrin family adhesion molecule 1 0.0243547
IRS2 insulin receptor substrate 2 0.0242816
NCOR2 nuclear receptor corepressor 2 0.0242413
ERRFI1 ERBB receptor feedback inhibitor 1 0.0242049
ACTN1 actinin, alpha 1 0.0241792
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0240641
PFKL phosphofructokinase, liver 0.0236917
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0235392
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0233965

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.177665
ZBTB20 zinc finger and BTB domain containing 20 -0.0986982
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0778268
ALCAM activated leukocyte cell adhesion molecule -0.0760076
CCND1 cyclin D1 -0.0726747
TXNRD1 thioredoxin reductase 1 -0.0606401
MAP4 microtubule-associated protein 4 -0.0603867
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0582572
PATJ PATJ crumbs cell polarity complex component -0.0556596
RPS2 ribosomal protein S2 -0.0541212
SVIL supervillin -0.0538627
GOLGA4 golgin A4 -0.0506688
RFC3 replication factor C (activator 1) 3, 38kDa -0.0498453
MBD5 methyl-CpG binding domain protein 5 -0.0492388
NRIP1 nuclear receptor interacting protein 1 -0.0462802
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0462148
CDK13 cyclin-dependent kinase 13 -0.045196
DLG1 discs, large homolog 1 (Drosophila) -0.0450981
SSH2 slingshot protein phosphatase 2 -0.0437598
FAF1 Fas (TNFRSF6) associated factor 1 -0.0435948
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0435625
JMJD1C jumonji domain containing 1C -0.0420627
USP34 ubiquitin specific peptidase 34 -0.0419309
BPTF bromodomain PHD finger transcription factor -0.041757
ASPH aspartate beta-hydroxylase -0.0417435
BICD1 bicaudal D homolog 1 (Drosophila) -0.0412397
VMP1 vacuole membrane protein 1 -0.0398564
FNIP1 folliculin interacting protein 1 -0.0391615
GOLGB1 golgin B1 -0.03896
TAS2R14 taste receptor, type 2, member 14 -0.0381131
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0376274
TCF12 transcription factor 12 -0.0369438
DIAPH3 diaphanous-related formin 3 -0.0368647
TUSC3 tumor suppressor candidate 3 -0.0367079
SCLT1 sodium channel and clathrin linker 1 -0.036446
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0359026
CLTC clathrin, heavy chain (Hc) -0.0358022
NIPBL Nipped-B homolog (Drosophila) -0.0356016
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0352071
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0346377
TOP2A topoisomerase (DNA) II alpha 170kDa -0.034637
NF1 neurofibromin 1 -0.0335713
TAOK1 TAO kinase 1 -0.0335444
MACROD2 MACRO domain containing 2 -0.0335292
ZFAND3 zinc finger, AN1-type domain 3 -0.033397
PAPOLA poly(A) polymerase alpha -0.0325668
R3HDM1 R3H domain containing 1 -0.0323906
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0323379
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0322034
STAU2 staufen double-stranded RNA binding protein 2 -0.0318717
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0316452
FER fer (fps/fes related) tyrosine kinase -0.0315721
FTL ferritin, light polypeptide -0.0314411
HMGA2 high mobility group AT-hook 2 -0.0314255
GPATCH8 G patch domain containing 8 -0.0313745
RTN3 reticulon 3 -0.0310545
CCDC138 coiled-coil domain containing 138 -0.0309397
SETD2 SET domain containing 2 -0.0308811
PTPRK protein tyrosine phosphatase, receptor type, K -0.0304566
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0299073
MKI67 marker of proliferation Ki-67 -0.0298782
DSG2 desmoglein 2 -0.0296754
ERBIN erbb2 interacting protein -0.0296552
MACC1 metastasis associated in colon cancer 1 -0.0296489
EPB41L5 erythrocyte membrane protein band 4.1 like 5 -0.029596
PKP4 plakophilin 4 -0.0295201
GPHN gephyrin -0.0294676
RANBP17 RAN binding protein 17 -0.0293479
ANKRD17 ankyrin repeat domain 17 -0.0293157
NCKAP1 NCK-associated protein 1 -0.0291066
PTK2 protein tyrosine kinase 2 -0.0290652
SLMAP sarcolemma associated protein -0.0289049
PUM2 pumilio RNA-binding family member 2 -0.0288886
BBX bobby sox homolog (Drosophila) -0.0287544
SBF2 SET binding factor 2 -0.0284481
POTEF POTE ankyrin domain family, member F -0.0281653
RPL32 ribosomal protein L32 -0.0277672
PLCB4 phospholipase C, beta 4 -0.0277185
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0275448
SAMD12 sterile alpha motif domain containing 12 -0.0274469
MMS22L MMS22-like, DNA repair protein -0.0265094
BIRC6 baculoviral IAP repeat containing 6 -0.0260949
TBC1D5 TBC1 domain family, member 5 -0.0260108
CD2AP CD2-associated protein -0.0259819
MBNL1 muscleblind-like splicing regulator 1 -0.0259652
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0257564
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.0257142
DSTN destrin (actin depolymerizing factor) -0.025597
DLC1 DLC1 Rho GTPase activating protein -0.0255005
ECT2 epithelial cell transforming 2 -0.0254724
RABGAP1L RAB GTPase activating protein 1-like -0.0252893
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0252331
MED13 mediator complex subunit 13 -0.0250534
ACACA acetyl-CoA carboxylase alpha -0.0249047
MON2 MON2 homolog (S. cerevisiae) -0.024714
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0247104
U2SURP U2 snRNP-associated SURP domain containing -0.0246662
RHEX regulator of hemoglobinization and erythroid cell expansion -0.0245534
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0245446
GMDS GDP-mannose 4,6-dehydratase -0.02424