Fumaric acid_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.211327
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.095624
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0774858
TMSB10 thymosin beta 10 0.0680308
MSN moesin 0.0619382
ELL2 elongation factor, RNA polymerase II, 2 0.0605681
PTMA prothymosin, alpha 0.0567414
RRM2 ribonucleotide reductase M2 0.0480102
TOP2A topoisomerase (DNA) II alpha 170kDa 0.047384
CLIC4 chloride intracellular channel 4 0.0472692
VCL vinculin 0.039111
MYH9 myosin, heavy chain 9, non-muscle 0.0375174
PLAUR plasminogen activator, urokinase receptor 0.0368791
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.036649
CENPF centromere protein F, 350/400kDa 0.033745
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0327391
JARID2 jumonji, AT rich interactive domain 2 0.031765
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0312566
VASP vasodilator-stimulated phosphoprotein 0.028901
TNIP1 TNFAIP3 interacting protein 1 0.0287413
SEPTIN9 septin 9 0.028568
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0285061
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0279226
TPI1 triosephosphate isomerase 1 0.0273897
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0264768
EGR1 early growth response 1 0.0262634
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0248135
PCBP2 poly(rC) binding protein 2 0.024209
UBA6 ubiquitin-like modifier activating enzyme 6 0.0236471
NGLY1 N-glycanase 1 0.0230223
MEF2A myocyte enhancer factor 2A 0.0229085
ADAM17 ADAM metallopeptidase domain 17 0.0225071
RTN4 reticulon 4 0.022384
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.022151
NAMPT nicotinamide phosphoribosyltransferase 0.0216501
VMP1 vacuole membrane protein 1 0.0214072
SP3 Sp3 transcription factor 0.0209611
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0208024
CAPRIN2 caprin family member 2 0.0204503
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0203416
CLEC1B C-type lectin domain family 1, member B 0.0202633
STC1 stanniocalcin 1 0.0199732
TPX2 TPX2, microtubule-associated 0.0190728
PRELID2 PRELI domain containing 2 0.0187914
ERRFI1 ERBB receptor feedback inhibitor 1 0.0186197
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0184563
AXL AXL receptor tyrosine kinase 0.0178091
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0177988
IQGAP3 IQ motif containing GTPase activating protein 3 0.0177479
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0176008
S100A6 S100 calcium binding protein A6 0.0175894
SPRED1 sprouty-related, EVH1 domain containing 1 0.0175587
ATP13A3 ATPase type 13A3 0.0175308
TUBB6 tubulin, beta 6 class V 0.0168487
FOSL1 FOS-like antigen 1 0.0164222
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0163897
NUP58 nucleoporin 58 0.0163006
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0161081
EIF5 eukaryotic translation initiation factor 5 0.0159281
NR1D2 nuclear receptor subfamily 1, group D, member 2 0.0159112
HPCAL1 hippocalcin-like 1 0.0158635
SET SET nuclear proto-oncogene 0.0157754
USP3 ubiquitin specific peptidase 3 0.0157637
ITGAV integrin, alpha V 0.0156987
RAI1 retinoic acid induced 1 0.0154147
ANLN anillin, actin binding protein 0.0151269
ACTN1 actinin, alpha 1 0.0150832
IRS2 insulin receptor substrate 2 0.0148768
MCL1 myeloid cell leukemia 1 0.0148341
RPL3 ribosomal protein L3 0.0146727
PPARD peroxisome proliferator-activated receptor delta 0.0145446
NONO non-POU domain containing, octamer-binding 0.0144126
CHD1L chromodomain helicase DNA binding protein 1-like 0.0142957
CKAP2L cytoskeleton associated protein 2-like 0.0142862
AMPD3 adenosine monophosphate deaminase 3 0.0141506
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0141011
CDCP1 CUB domain containing protein 1 0.0139582
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0139532
FLNB filamin B, beta 0.0139475
TPM3 tropomyosin 3 0.0138946
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0138294
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0136387
TOP1 topoisomerase (DNA) I 0.0133918
CD82 CD82 molecule 0.0131455
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0130743
CEMIP cell migration inducing protein, hyaluronan binding 0.0130709
DOT1L DOT1-like histone H3K79 methyltransferase 0.0126989
KIF18B kinesin family member 18B 0.0126831
PTBP3 polypyrimidine tract binding protein 3 0.0123295
SPAG5 sperm associated antigen 5 0.0122315
MLEC malectin 0.0121581
RNF220 ring finger protein 220 0.0120768
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0120458
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.011927
PFN1 profilin 1 0.0116885
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0116822
LUZP1 leucine zipper protein 1 0.0115926
PLS3 plastin 3 0.0115771
RCOR1 REST corepressor 1 0.0115329
SH2B3 SH2B adaptor protein 3 0.011479

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.560564
FN1 fibronectin 1 -0.28413
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.185934
IGF2 insulin-like growth factor 2 -0.132008
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.121015
HMGA2 high mobility group AT-hook 2 -0.120162
TPT1 tumor protein, translationally-controlled 1 -0.109971
COL5A1 collagen, type V, alpha 1 -0.106885
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0930142
NDRG1 N-myc downstream regulated 1 -0.0879192
CD44 CD44 molecule (Indian blood group) -0.0733396
COL6A1 collagen, type VI, alpha 1 -0.0724086
ANXA2 annexin A2 -0.0702757
RPLP1 ribosomal protein, large, P1 -0.068037
EXT1 exostosin glycosyltransferase 1 -0.0656912
CANX calnexin -0.0636921
LOX lysyl oxidase -0.0633592
CDH13 cadherin 13 -0.063154
LAMB3 laminin, beta 3 -0.0604226
TRIO trio Rho guanine nucleotide exchange factor -0.0584999
CCND1 cyclin D1 -0.0531558
RAI14 retinoic acid induced 14 -0.0530609
AHNAK AHNAK nucleoprotein -0.0529647
RPS6 ribosomal protein S6 -0.0526149
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0503836
TM4SF1 transmembrane 4 L six family member 1 -0.0493261
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0484929
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0469496
FTL ferritin, light polypeptide -0.0457111
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0450373
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0444114
RPS8 ribosomal protein S8 -0.0439918
ACTG1 actin gamma 1 -0.043539
ANKRD28 ankyrin repeat domain 28 -0.0419842
HDLBP high density lipoprotein binding protein -0.041893
CAVIN1 caveolae associated protein 1 -0.0402214
TAS2R14 taste receptor, type 2, member 14 -0.0395429
PTK2 protein tyrosine kinase 2 -0.0391001
MAML3 mastermind-like 3 (Drosophila) -0.0370169
GOLGB1 golgin B1 -0.0368986
GOLGA4 golgin A4 -0.0362037
FTH1 ferritin, heavy polypeptide 1 -0.0359899
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0358909
GRB10 growth factor receptor-bound protein 10 -0.0352287
GLIS3 GLIS family zinc finger 3 -0.0348715
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0342729
RPL12 ribosomal protein L12 -0.0339862
RPL35A ribosomal protein L35a -0.0336055
RPL19 ribosomal protein L19 -0.0334909
RPL8 ribosomal protein L8 -0.0334464
RPL34 ribosomal protein L34 -0.0332478
MMP12 matrix metallopeptidase 12 -0.0319031
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0315338
MORF4L2 mortality factor 4 like 2 -0.0314356
EGFR epidermal growth factor receptor -0.0311592
RPS24 ribosomal protein S24 -0.0311332
COL4A2 collagen, type IV, alpha 2 -0.0306898
RPS13 ribosomal protein S13 -0.0301652
GLG1 golgi glycoprotein 1 -0.0298945
MTDH metadherin -0.0298204
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.029799
IER3 immediate early response 3 -0.0297361
SEC31A SEC31 homolog A (S. cerevisiae) -0.0297047
RUNX1 runt-related transcription factor 1 -0.0294949
BACE2 beta-site APP-cleaving enzyme 2 -0.0293647
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0293476
SQSTM1 sequestosome 1 -0.0292581
SEC24D SEC24 family member D -0.0292111
FMN1 formin 1 -0.0290121
AFF3 AF4/FMR2 family, member 3 -0.0286616
JMJD1C jumonji domain containing 1C -0.0286465
MAP4 microtubule-associated protein 4 -0.0285858
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0285706
PTPRM protein tyrosine phosphatase, receptor type, M -0.0284447
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0283773
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0283571
ZBTB20 zinc finger and BTB domain containing 20 -0.0282515
FBXL2 F-box and leucine-rich repeat protein 2 -0.0280084
EMP1 epithelial membrane protein 1 -0.0277741
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0276191
DTNA dystrobrevin, alpha -0.0273422
GNAS GNAS complex locus -0.027016
KDM5B lysine (K)-specific demethylase 5B -0.0267873
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0265895
VEGFA vascular endothelial growth factor A -0.0265256
RPS27A ribosomal protein S27a -0.0262356
NAV1 neuron navigator 1 -0.0260116
RAB1A RAB1A, member RAS oncogene family -0.0258665
BPTF bromodomain PHD finger transcription factor -0.0257864
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0256067
BTG1 B-cell translocation gene 1, anti-proliferative -0.0254375
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0254312
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0254139
TTC3 tetratricopeptide repeat domain 3 -0.0252836
IARS1 isoleucyl-tRNA synthetase 1 -0.0249964
FLNA filamin A, alpha -0.0249753
NF1 neurofibromin 1 -0.0248442
BICD1 bicaudal D homolog 1 (Drosophila) -0.0246193
HMGA1 high mobility group AT-hook 1 -0.0245495
ARHGAP22 Rho GTPase activating protein 22 -0.0243938