Fumaric acid_J82 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in J82 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_J82 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.202647
TRIO trio Rho guanine nucleotide exchange factor 0.175022
MYH9 myosin, heavy chain 9, non-muscle 0.1575
IGFBP3 insulin-like growth factor binding protein 3 0.151458
HLA-C major histocompatibility complex, class I, C 0.106537
NDRG1 N-myc downstream regulated 1 0.0890331
HLA-B major histocompatibility complex, class I, B 0.0832973
NAV2 neuron navigator 2 0.0808931
PODXL podocalyxin-like 0.0778017
VEGFA vascular endothelial growth factor A 0.0571979
MSN moesin 0.0537748
NCOR2 nuclear receptor corepressor 2 0.0536669
ADM adrenomedullin 0.0530362
FLNB filamin B, beta 0.0518
PLEC plectin 0.0511392
FOSL1 FOS-like antigen 1 0.0506853
BHLHE40 basic helix-loop-helix family, member e40 0.0496499
TNIP1 TNFAIP3 interacting protein 1 0.0486842
NONO non-POU domain containing, octamer-binding 0.0474158
FLNA filamin A, alpha 0.0470501
LOC112694756 uncharaterized LOC112694756 0.044232
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0433054
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0427636
ZNF841 zinc finger protein 841 0.0411029
KRT8 keratin 8, type II 0.0405619
CEP250 centrosomal protein 250kDa 0.040168
NUMA1 nuclear mitotic apparatus protein 1 0.0401606
ARGLU1 arginine and glutamate rich 1 0.0392221
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0382605
EEF2 eukaryotic translation elongation factor 2 0.0375555
COL5A1 collagen, type V, alpha 1 0.0375498
SRRM2 serine/arginine repetitive matrix 2 0.0353707
TMSB4X thymosin beta 4, X-linked 0.035201
SMAD3 SMAD family member 3 0.0342762
ACTN1 actinin, alpha 1 0.0340805
ADARB1 adenosine deaminase, RNA-specific, B1 0.033151
RPL3 ribosomal protein L3 0.0327146
COL7A1 collagen, type VII, alpha 1 0.0320912
FRMD6 FERM domain containing 6 0.0308537
RLIM ring finger protein, LIM domain interacting 0.0308397
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0304938
HLA-A major histocompatibility complex, class I, A 0.030417
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0302898
CPNE1 copine I 0.0302155
AKAP12 A kinase (PRKA) anchor protein 12 0.0296715
RPL35A ribosomal protein L35a 0.0289015
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0277648
SHB Src homology 2 domain containing adaptor protein B 0.0276344
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0265966
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0263565
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.025527
MIDEAS mitotic deacetylase associated SANT domain protein 0.0247997
MPRIP myosin phosphatase Rho interacting protein 0.0244572
PPP1R18 protein phosphatase 1, regulatory subunit 18 0.0242431
PRRC2A proline-rich coiled-coil 2A 0.0241619
DTNA dystrobrevin, alpha 0.0241097
NIBAN2 niban apoptosis regulator 2 0.0240089
SEPTIN9 septin 9 0.0239485
MT2A metallothionein 2A 0.0238973
ZMIZ1 zinc finger, MIZ-type containing 1 0.0235517
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0231414
CADM1 cell adhesion molecule 1 0.0229047
NAV1 neuron navigator 1 0.0227759
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0227081
YBX1 Y box binding protein 1 0.0224339
DIDO1 death inducer-obliterator 1 0.0221928
ACTG1 actin gamma 1 0.0221184
CNOT12 CCR4-NOT transcription complex subunit 12 0.0217428
JUN jun proto-oncogene 0.0216213
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0211258
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0210669
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0209912
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0209858
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0200692
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0199159
MINK1 misshapen-like kinase 1 0.0197758
EFHD2 EF-hand domain family, member D2 0.0195031
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0194262
SDK1 sidekick cell adhesion molecule 1 0.0191986
UBA6 ubiquitin-like modifier activating enzyme 6 0.0191154
FTH1 ferritin, heavy polypeptide 1 0.0191091
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0191072
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.0190762
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0189463
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0188808
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.01881
PFKP phosphofructokinase, platelet 0.018717
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0185008
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0183009
CD59 CD59 molecule, complement regulatory protein 0.0182264
ARID1A AT rich interactive domain 1A (SWI-like) 0.0181908
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0181132
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0180249
IQGAP3 IQ motif containing GTPase activating protein 3 0.0179492
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0178403
GOLGA3 golgin A3 0.0177712
LENG8 leukocyte receptor cluster (LRC) member 8 0.0177247
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.017702
COPG1 coatomer protein complex, subunit gamma 1 0.0176336
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0175666

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.251794
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.170741
DEK DEK proto-oncogene -0.110425
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0884437
FTL ferritin, light polypeptide -0.0760883
FN1 fibronectin 1 -0.0758048
TXNRD1 thioredoxin reductase 1 -0.0742516
NALF1 NALCN channel auxiliary factor 1 -0.0665554
GLIS3 GLIS family zinc finger 3 -0.0619946
ABI3BP ABI family, member 3 (NESH) binding protein -0.0537234
STAU1 staufen double-stranded RNA binding protein 1 -0.0536412
EXT1 exostosin glycosyltransferase 1 -0.0533977
ENO1 enolase 1, (alpha) -0.0527247
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0516545
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0510177
CANX calnexin -0.0503195
AHNAK AHNAK nucleoprotein -0.0460985
GOLGA4 golgin A4 -0.0456827
DIAPH3 diaphanous-related formin 3 -0.0450448
PDIA3 protein disulfide isomerase family A, member 3 -0.0443802
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0443372
MAP4 microtubule-associated protein 4 -0.042742
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0420779
NIPBL Nipped-B homolog (Drosophila) -0.0416149
NAMPT nicotinamide phosphoribosyltransferase -0.0404204
LMAN1 lectin, mannose-binding, 1 -0.0387336
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0378059
CD44 CD44 molecule (Indian blood group) -0.0369842
GNAS GNAS complex locus -0.036211
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0360655
UBC ubiquitin C -0.0358832
ZBTB20 zinc finger and BTB domain containing 20 -0.0357276
MAP1B microtubule-associated protein 1B -0.0351559
LOX lysyl oxidase -0.0348541
POSTN periostin, osteoblast specific factor -0.0347806
MTDH metadherin -0.0343465
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0341704
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0341112
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0339997
PTMA prothymosin, alpha -0.0338593
RAI14 retinoic acid induced 14 -0.033324
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0328294
ZFR zinc finger RNA binding protein -0.0326167
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.03256
IPO7 importin 7 -0.0322529
DLG1 discs, large homolog 1 (Drosophila) -0.0321393
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0320285
HMGB1 high mobility group box 1 -0.0317955
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0317928
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0310268
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0309956
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0308696
IARS1 isoleucyl-tRNA synthetase 1 -0.0307465
GOLGB1 golgin B1 -0.0306907
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0306728
CCND1 cyclin D1 -0.0305485
BASP1 brain abundant, membrane attached signal protein 1 -0.030395
ZNF804A zinc finger protein 804A -0.0303389
NF1 neurofibromin 1 -0.0302417
UFM1 ubiquitin-fold modifier 1 -0.0292366
PPME1 protein phosphatase methylesterase 1 -0.0288754
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.028691
PLCB4 phospholipase C, beta 4 -0.0282234
RHOBTB3 Rho-related BTB domain containing 3 -0.028035
DPYD dihydropyrimidine dehydrogenase -0.0275879
PTBP3 polypyrimidine tract binding protein 3 -0.0275149
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0272871
ERBIN erbb2 interacting protein -0.0271547
HMGB2 high mobility group box 2 -0.0271378
FAF1 Fas (TNFRSF6) associated factor 1 -0.0268774
CALR calreticulin -0.026693
ANXA2 annexin A2 -0.0264887
ALCAM activated leukocyte cell adhesion molecule -0.0263129
RBM25 RNA binding motif protein 25 -0.026227
COL3A1 collagen, type III, alpha 1 -0.0262222
S100A10 S100 calcium binding protein A10 -0.0261658
SLIT2 slit homolog 2 (Drosophila) -0.0259693
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0257842
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.02575
VEGFC vascular endothelial growth factor C -0.025658
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.025484
IFI6 interferon, alpha-inducible protein 6 -0.0254485
TMEM263 transmembrane protein 263 -0.0253931
OSMR oncostatin M receptor -0.0253717
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0252911
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.025262
COPB1 coatomer protein complex, subunit beta 1 -0.0250467
NOP58 NOP58 ribonucleoprotein -0.0249178
PIBF1 progesterone immunomodulatory binding factor 1 -0.024781
NAP1L1 nucleosome assembly protein 1-like 1 -0.0245636
PTX3 pentraxin 3, long -0.0245635
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0244385
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0243265
IER3 immediate early response 3 -0.0243215
HLA-E major histocompatibility complex, class I, E -0.0242576
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0242279
SEPTIN7 septin 7 -0.0241871
PARD3B par-3 family cell polarity regulator beta -0.0240964
RTN3 reticulon 3 -0.0240484
RPL12 ribosomal protein L12 -0.0238293