Fumaric acid_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TMSB4X thymosin beta 4, X-linked 0.146
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.125892
MT2A metallothionein 2A 0.107157
TMSB10 thymosin beta 10 0.100375
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0943999
PTMA prothymosin, alpha 0.0925991
LOC112694756 uncharaterized LOC112694756 0.085488
EEF2 eukaryotic translation elongation factor 2 0.0807717
MYH9 myosin, heavy chain 9, non-muscle 0.07768
FMNL2 formin-like 2 0.0746072
PGK1 phosphoglycerate kinase 1 0.0677002
ANKRD11 ankyrin repeat domain 11 0.0673558
NONO non-POU domain containing, octamer-binding 0.0666565
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0658114
DST dystonin 0.0640747
RPL3 ribosomal protein L3 0.0588118
YBX1 Y box binding protein 1 0.0548343
PIAS2 protein inhibitor of activated STAT, 2 0.0523785
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0501145
WSB1 WD repeat and SOCS box containing 1 0.0499848
ADAM17 ADAM metallopeptidase domain 17 0.0488127
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0481023
RPL23 ribosomal protein L23 0.0477762
PLEC plectin 0.0473153
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0467163
APP amyloid beta (A4) precursor protein 0.0461707
EZR ezrin 0.04579
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0457496
TRIO trio Rho guanine nucleotide exchange factor 0.0455462
XPO1 exportin 1 0.0452015
ESYT2 extended synaptotagmin-like protein 2 0.0443616
ZNF292 zinc finger protein 292 0.0439674
KDM3A lysine (K)-specific demethylase 3A 0.0438747
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0436923
FXR1 fragile X mental retardation, autosomal homolog 1 0.0424878
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.041026
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0406338
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0405904
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0405846
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0403634
SRRM2 serine/arginine repetitive matrix 2 0.0401413
PUM1 pumilio RNA-binding family member 1 0.0388194
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0387797
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0385367
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0382262
OGA O-GlcNAcase 0.0381974
SEPTIN2 septin 2 0.0381777
MT1X metallothionein 1X 0.0380533
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0379866
DDIT4 DNA-damage-inducible transcript 4 0.0378309
ERRFI1 ERBB receptor feedback inhibitor 1 0.037515
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0366207
NIBAN2 niban apoptosis regulator 2 0.036135
FUS FUS RNA binding protein 0.035898
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0356132
SRPK2 SRSF protein kinase 2 0.0355171
RPL35A ribosomal protein L35a 0.0349457
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0349425
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0349368
TNIP1 TNFAIP3 interacting protein 1 0.0343967
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0343326
SPAG9 sperm associated antigen 9 0.0342107
PODXL podocalyxin-like 0.0341439
PCBP2 poly(rC) binding protein 2 0.0340017
NDRG1 N-myc downstream regulated 1 0.0338185
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) 0.0338181
SET SET nuclear proto-oncogene 0.0338071
RLIM ring finger protein, LIM domain interacting 0.0337508
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0326688
PKM pyruvate kinase, muscle 0.0325055
RPS19 ribosomal protein S19 0.0323381
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0323153
FLNB filamin B, beta 0.0322764
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0318808
CEP250 centrosomal protein 250kDa 0.0316075
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0311579
NUP58 nucleoporin 58 0.0307786
MSN moesin 0.0307507
USP9X ubiquitin specific peptidase 9, X-linked 0.0307063
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0306556
EIF4A2 eukaryotic translation initiation factor 4A2 0.0306033
ADAR adenosine deaminase, RNA-specific 0.0301889
RAD23B RAD23 homolog B (S. cerevisiae) 0.0299148
RPL37 ribosomal protein L37 0.0297248
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0295539
CAMTA1 calmodulin binding transcription activator 1 0.0294687
WDR45B WD repeat domain 45B 0.0294596
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0288056
HSPA8 heat shock 70kDa protein 8 0.0287132
WNK1 WNK lysine deficient protein kinase 1 0.0286703
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0285951
PDE8A phosphodiesterase 8A 0.0285859
YBX3 Y box binding protein 3 0.028561
NUMA1 nuclear mitotic apparatus protein 1 0.0284561
FOSL1 FOS-like antigen 1 0.0283773
LDHA lactate dehydrogenase A 0.0282582
NAMPT nicotinamide phosphoribosyltransferase 0.0281103
MARCHF6 membrane associated ring-CH-type finger 6 0.0279575
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0277475
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0271935

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.339386
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.129002
TM4SF1 transmembrane 4 L six family member 1 -0.119002
TP63 tumor protein p63 -0.0938546
TXNRD1 thioredoxin reductase 1 -0.0917305
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0650984
CD44 CD44 molecule (Indian blood group) -0.0606017
PSD3 pleckstrin and Sec7 domain containing 3 -0.0538185
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0529954
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0466731
EHBP1 EH domain binding protein 1 -0.0450886
SLC38A2 solute carrier family 38, member 2 -0.0450428
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0442231
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.038893
GCLM glutamate-cysteine ligase, modifier subunit -0.0382457
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.036449
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0350551
HMGA1 high mobility group AT-hook 1 -0.0341393
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.032221
EGR1 early growth response 1 -0.0317764
TPT1 tumor protein, translationally-controlled 1 -0.0310602
VIM vimentin -0.0308055
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -0.0299011
BPTF bromodomain PHD finger transcription factor -0.0291486
USP34 ubiquitin specific peptidase 34 -0.0275411
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0273484
PDE10A phosphodiesterase 10A -0.026779
SRGN serglycin -0.0264646
RPS2 ribosomal protein S2 -0.0255544
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.024747
MBD5 methyl-CpG binding domain protein 5 -0.0244786
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0243356
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0240225
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0235267
ZBTB38 zinc finger and BTB domain containing 38 -0.0233448
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0222647
MYC v-myc avian myelocytomatosis viral oncogene homolog -0.0220343
SPRY4 sprouty homolog 4 (Drosophila) -0.0219095
OSMR oncostatin M receptor -0.0213327
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.021075
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0210099
PLSCR1 phospholipid scramblase 1 -0.0210027
ANTXR2 anthrax toxin receptor 2 -0.0209441
CSMD3 CUB and Sushi multiple domains 3 -0.0197042
ARHGAP29 Rho GTPase activating protein 29 -0.019647
ANKHD1 ankyrin repeat and KH domain containing 1 -0.019414
IFIH1 interferon induced with helicase C domain 1 -0.019072
BICD1 bicaudal D homolog 1 (Drosophila) -0.0182085
CANX calnexin -0.0182035
PATJ PATJ crumbs cell polarity complex component -0.0181685
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0181615
TAS2R14 taste receptor, type 2, member 14 -0.0179626
THSD4 thrombospondin, type I, domain containing 4 -0.0177741
CDK13 cyclin-dependent kinase 13 -0.0177548
CAPN2 calpain 2, (m/II) large subunit -0.0176806
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0175939
EREG epiregulin -0.0173936
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0172995
RIGI RNA sensor RIG-I -0.0172077
SDCCAG8 serologically defined colon cancer antigen 8 -0.0171597
RSL1D1 ribosomal L1 domain containing 1 -0.0169342
RBBP6 retinoblastoma binding protein 6 -0.0164945
CDCP1 CUB domain containing protein 1 -0.0163809
FER fer (fps/fes related) tyrosine kinase -0.0162448
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0162269
RAB27B RAB27B, member RAS oncogene family -0.0161327
MYO9A myosin IXA -0.0160478
ERCC6L2 excision repair cross-complementation group 6-like 2 -0.0157023
GNAS GNAS complex locus -0.0154768
AHI1 Abelson helper integration site 1 -0.0152981
NEK10 NIMA-related kinase 10 -0.0151899
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0151832
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0150861
GOLGB1 golgin B1 -0.014764
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.014756
IARS1 isoleucyl-tRNA synthetase 1 -0.0146644
PHF14 PHD finger protein 14 -0.0142956
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0139146
CFAP299 cilia and flagella associated protein 299 -0.0138924
CLIP1 CAP-GLY domain containing linker protein 1 -0.0137957
NBEAL1 neurobeachin-like 1 -0.0133842
INTS6 integrator complex subunit 6 -0.0133417
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0133199
CEP112 centrosomal protein 112kDa -0.0133189
DPYD dihydropyrimidine dehydrogenase -0.0131996
CADM2 cell adhesion molecule 2 -0.0131913
MAP4 microtubule-associated protein 4 -0.0130437
GCC2 GRIP and coiled-coil domain containing 2 -0.0130319
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.012736
RGS4 regulator of G-protein signaling 4 -0.0126881
HDAC8 histone deacetylase 8 -0.0126295
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0126266
GAN gigaxonin -0.0126116
BMERB1 bMERB domain containing 1 -0.0126008
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0123967
RABGAP1L RAB GTPase activating protein 1-like -0.0123104
ATF6 activating transcription factor 6 -0.0122185
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0122073
DPYSL2 dihydropyrimidinase-like 2 -0.0119668
TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough -0.0119098