Fumaric acid_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.115684
ACTG1 actin gamma 1 0.110226
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0966532
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0951615
TMSB10 thymosin beta 10 0.0910983
RPL3 ribosomal protein L3 0.0869397
EEF2 eukaryotic translation elongation factor 2 0.0775872
MYH9 myosin, heavy chain 9, non-muscle 0.0769264
HSPA8 heat shock 70kDa protein 8 0.0677913
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0659829
CMIP c-Maf inducing protein 0.0649317
ACTN1 actinin, alpha 1 0.0602173
SAMD4A sterile alpha motif domain containing 4A 0.0520516
ANKRD11 ankyrin repeat domain 11 0.0506941
HLA-B major histocompatibility complex, class I, B 0.0492087
YBX3 Y box binding protein 3 0.0490656
GRAMD1B GRAM domain containing 1B 0.0487348
PLEC plectin 0.0484847
LOC112694756 uncharaterized LOC112694756 0.0470793
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0451664
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0451302
TRIO trio Rho guanine nucleotide exchange factor 0.0437612
NUMA1 nuclear mitotic apparatus protein 1 0.0432791
SRRM2 serine/arginine repetitive matrix 2 0.0432149
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.042041
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0414365
MSN moesin 0.0407172
FLNA filamin A, alpha 0.0387515
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0367193
APP amyloid beta (A4) precursor protein 0.0355804
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.034289
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0337497
NONO non-POU domain containing, octamer-binding 0.0337187
SFTPA2 surfactant protein A2 0.0334959
HDGF hepatoma-derived growth factor 0.0319767
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0314652
EWSR1 EWS RNA-binding protein 1 0.0313069
SMAD3 SMAD family member 3 0.0312734
LDHA lactate dehydrogenase A 0.0307809
FUS FUS RNA binding protein 0.0307186
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0296706
MACF1 microtubule-actin crosslinking factor 1 0.0295256
RPL41 ribosomal protein L41 0.0293052
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.0293016
SPAG5 sperm associated antigen 5 0.0292965
HLA-C major histocompatibility complex, class I, C 0.0292632
ADAR adenosine deaminase, RNA-specific 0.0290366
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0290083
UBAP2L ubiquitin associated protein 2-like 0.0289944
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0289679
USP36 ubiquitin specific peptidase 36 0.0288261
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0288086
FAM107B family with sequence similarity 107, member B 0.0287403
MEF2D myocyte enhancer factor 2D 0.0279786
NDRG1 N-myc downstream regulated 1 0.0279133
TNIP1 TNFAIP3 interacting protein 1 0.0277652
ERGIC3 ERGIC and golgi 3 0.0277278
PFKP phosphofructokinase, platelet 0.0275907
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0275415
EGR1 early growth response 1 0.0273785
DOCK4 dedicator of cytokinesis 4 0.0272957
BRD2 bromodomain containing 2 0.0266927
EIF4A2 eukaryotic translation initiation factor 4A2 0.0266858
TPI1 triosephosphate isomerase 1 0.0263012
FLNB filamin B, beta 0.0262952
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0262054
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.026187
RPL11 ribosomal protein L11 0.0261042
TPM3 tropomyosin 3 0.0260338
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0260148
IQGAP3 IQ motif containing GTPase activating protein 3 0.026014
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 0.0257039
FNDC3B fibronectin type III domain containing 3B 0.0250586
ACBD3 acyl-CoA binding domain containing 3 0.0250076
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0248854
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0248032
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 0.0246378
RRM2 ribonucleotide reductase M2 0.0244711
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0244228
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0243593
UBASH3B ubiquitin associated and SH3 domain containing B 0.0243079
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0242252
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0241183
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0237381
CABIN1 calcineurin binding protein 1 0.0237211
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0235447
CAMTA1 calmodulin binding transcription activator 1 0.0234666
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0232941
ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 0.0232784
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0232349
KMT2D lysine (K)-specific methyltransferase 2D 0.0231258
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.0225847
DIDO1 death inducer-obliterator 1 0.0225822
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.022524
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0222947
RPL35A ribosomal protein L35a 0.022212
TRA2B transformer 2 beta homolog (Drosophila) 0.0221228
USP32 ubiquitin specific peptidase 32 0.0219793
KDM3A lysine (K)-specific demethylase 3A 0.0218588
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0215463

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.302937
FTL ferritin, light polypeptide -0.202783
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.150225
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.12753
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.109049
PM20D1 peptidase M20 domain containing 1 -0.0967878
FGB fibrinogen beta chain -0.0899385
TXNRD1 thioredoxin reductase 1 -0.0855346
TFPI2 tissue factor pathway inhibitor 2 -0.0744113
RPLP1 ribosomal protein, large, P1 -0.0553536
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0552493
SLC38A2 solute carrier family 38, member 2 -0.0474956
IER3 immediate early response 3 -0.046867
EIF1 eukaryotic translation initiation factor 1 -0.0466586
FTH1 ferritin, heavy polypeptide 1 -0.0456307
BICC1 BicC family RNA binding protein 1 -0.0414789
RPS12 ribosomal protein S12 -0.0397541
RPS2 ribosomal protein S2 -0.0390796
EFNA5 ephrin-A5 -0.0365965
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0360862
SVIL supervillin -0.0360793
TM4SF1 transmembrane 4 L six family member 1 -0.0356481
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0352534
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0349801
RPS5 ribosomal protein S5 -0.0344605
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0339224
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0334801
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.033374
HDAC9 histone deacetylase 9 -0.0330468
RPL19 ribosomal protein L19 -0.0330146
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0322648
SLC38A1 solute carrier family 38, member 1 -0.03149
FGG fibrinogen gamma chain -0.0297765
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0295674
SRGN serglycin -0.0293084
IGF2 insulin-like growth factor 2 -0.0291172
PTMA prothymosin, alpha -0.0287863
BZW2 basic leucine zipper and W2 domains 2 -0.0286226
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0285987
NCOA7 nuclear receptor coactivator 7 -0.0283147
AHR aryl hydrocarbon receptor -0.0282871
FNBP1L formin binding protein 1-like -0.0282114
NTN4 netrin 4 -0.0277186
ERBIN erbb2 interacting protein -0.0275437
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0270773
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0270468
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0266536
S100A10 S100 calcium binding protein A10 -0.0265196
RPS25 ribosomal protein S25 -0.025991
RPS8 ribosomal protein S8 -0.0259241
CANX calnexin -0.0257808
GNAS GNAS complex locus -0.0257034
RPL8 ribosomal protein L8 -0.02543
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0253179
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0251552
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0250983
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0250035
BASP1 brain abundant, membrane attached signal protein 1 -0.0249993
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0245905
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0245902
NOP58 NOP58 ribonucleoprotein -0.0245507
PDE4D phosphodiesterase 4D, cAMP-specific -0.0244248
RTN4 reticulon 4 -0.0239805
PDIA6 protein disulfide isomerase family A, member 6 -0.0238453
KDM5B lysine (K)-specific demethylase 5B -0.0232352
ZNF207 zinc finger protein 207 -0.0230749
PNISR PNN-interacting serine/arginine-rich protein -0.0230177
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0229023
BTBD7 BTB (POZ) domain containing 7 -0.0228187
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0227949
RNF145 ring finger protein 145 -0.0226931
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0226553
NEGR1 neuronal growth regulator 1 -0.0225417
MBNL1 muscleblind-like splicing regulator 1 -0.0225139
KMT2E lysine (K)-specific methyltransferase 2E -0.0218048
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0215513
KLF6 Kruppel-like factor 6 -0.0213566
RPS20 ribosomal protein S20 -0.0211672
RHOA ras homolog family member A -0.0210041
WBP11 WW domain binding protein 11 -0.0208091
RPL14 ribosomal protein L14 -0.0207314
NIPBL Nipped-B homolog (Drosophila) -0.0206066
CLDN1 claudin 1 -0.0205758
LMAN1 lectin, mannose-binding, 1 -0.0204016
AFTPH aftiphilin -0.0203792
MAP4 microtubule-associated protein 4 -0.0202965
PDIA3 protein disulfide isomerase family A, member 3 -0.0202221
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0201988
RPL23A ribosomal protein L23a -0.019897
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0194708
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0192312
KIF5B kinesin family member 5B -0.0192262
STAU1 staufen double-stranded RNA binding protein 1 -0.0189534
RAB1A RAB1A, member RAS oncogene family -0.0186035
RDX radixin -0.0185891
BHLHE40 basic helix-loop-helix family, member e40 -0.0185644
RBM25 RNA binding motif protein 25 -0.0181836
HMGB1 high mobility group box 1 -0.0181499
RSL1D1 ribosomal L1 domain containing 1 -0.0180065
CUX1 cut-like homeobox 1 -0.0175618