Fumaric acid_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 0.154427
ELL2 elongation factor, RNA polymerase II, 2 0.0802166
FAM13A family with sequence similarity 13, member A 0.0801326
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0775052
AKAP12 A kinase (PRKA) anchor protein 12 0.0749444
NALF1 NALCN channel auxiliary factor 1 0.0749218
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0728844
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0724459
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0724044
DST dystonin 0.0700584
TTC3 tetratricopeptide repeat domain 3 0.0699824
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0697222
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0694805
HOOK2 hook microtubule-tethering protein 2 0.0684253
KDM3A lysine (K)-specific demethylase 3A 0.062329
STC1 stanniocalcin 1 0.0610761
PCBP2 poly(rC) binding protein 2 0.0601033
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0559283
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0554699
EFNA5 ephrin-A5 0.0544734
PGK1 phosphoglycerate kinase 1 0.0530918
NUP58 nucleoporin 58 0.0525705
MMP1 matrix metallopeptidase 1 0.0524185
MYH9 myosin, heavy chain 9, non-muscle 0.0520822
TRIO trio Rho guanine nucleotide exchange factor 0.051941
PSD3 pleckstrin and Sec7 domain containing 3 0.0513239
WDFY3 WD repeat and FYVE domain containing 3 0.0505148
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0502727
EGFR epidermal growth factor receptor 0.0502096
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0495726
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0495353
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0493258
SRRM2 serine/arginine repetitive matrix 2 0.0486945
SEPTIN9 septin 9 0.0483817
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.047152
ZNF292 zinc finger protein 292 0.0471163
CDH13 cadherin 13 0.0470977
NAMPT nicotinamide phosphoribosyltransferase 0.0470404
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0461417
UBE2O ubiquitin-conjugating enzyme E2O 0.0459823
PTMA prothymosin, alpha 0.0457505
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0456483
RPL3 ribosomal protein L3 0.0449937
NCOR2 nuclear receptor corepressor 2 0.0449468
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0446727
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0438096
ESYT2 extended synaptotagmin-like protein 2 0.0436074
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0435832
NPTN neuroplastin 0.0435415
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.043405
ADAM9 ADAM metallopeptidase domain 9 0.0426582
EIF1 eukaryotic translation initiation factor 1 0.042172
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.040933
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0405618
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0404819
GRB10 growth factor receptor-bound protein 10 0.0404732
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0403393
SDK1 sidekick cell adhesion molecule 1 0.039206
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0391942
XPO1 exportin 1 0.0389623
TMSB4X thymosin beta 4, X-linked 0.038762
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0381883
GARS1 glycyl-tRNA synthetase 1 0.0378259
LAMA4 laminin, alpha 4 0.0375514
ANGPTL4 angiopoietin-like 4 0.0374738
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0373534
NPAS2 neuronal PAS domain protein 2 0.0371104
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0368335
VEGFA vascular endothelial growth factor A 0.036807
MXD1 MAX dimerization protein 1 0.0368068
EEF2 eukaryotic translation elongation factor 2 0.0366282
PNISR PNN-interacting serine/arginine-rich protein 0.0364707
SON SON DNA binding protein 0.0362712
GOLGA4 golgin A4 0.0362053
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.035968
NBAS neuroblastoma amplified sequence 0.0358368
PLEC plectin 0.0355746
ADARB1 adenosine deaminase, RNA-specific, B1 0.0353789
AFDN afadin, adherens junction formation factor 0.0352877
DLG1 discs, large homolog 1 (Drosophila) 0.0352129
KDM6A lysine (K)-specific demethylase 6A 0.0351063
UBAP2L ubiquitin associated protein 2-like 0.035072
LIMCH1 LIM and calponin homology domains 1 0.0350572
FLNB filamin B, beta 0.0347596
ZEB1 zinc finger E-box binding homeobox 1 0.0345819
ZMIZ1 zinc finger, MIZ-type containing 1 0.0345716
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0345157
KRT8 keratin 8, type II 0.0343943
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.033958
INSIG2 insulin induced gene 2 0.0338567
DTNA dystrobrevin, alpha 0.0335287
FXR1 fragile X mental retardation, autosomal homolog 1 0.0332678
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0331661
SMAD3 SMAD family member 3 0.033109
YTHDC1 YTH domain containing 1 0.0330326
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0321343
NRG1 neuregulin 1 0.0319612
PDCD6IP programmed cell death 6 interacting protein 0.031522
ZBTB20 zinc finger and BTB domain containing 20 0.0314007
TPM3 tropomyosin 3 0.0312506

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.265815
MYO1E myosin IE -0.132771
FTL ferritin, light polypeptide -0.10851
ANXA2 annexin A2 -0.0997887
NCOA3 nuclear receptor coactivator 3 -0.0872207
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0866125
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0845182
ANXA1 annexin A1 -0.0793499
S100A9 S100 calcium binding protein A9 -0.0774386
SAMD4A sterile alpha motif domain containing 4A -0.0762822
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0718403
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0714238
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0680156
S100A10 S100 calcium binding protein A10 -0.0659587
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0654266
VIM vimentin -0.064468
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0625792
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0578975
KRT17 keratin 17, type I -0.0575665
ATOSA atos homolog A -0.05613
LMO7 LIM domain 7 -0.0556155
EPSTI1 epithelial stromal interaction 1 (breast) -0.0554875
UBE2H ubiquitin-conjugating enzyme E2H -0.0525868
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0524457
KYNU kynureninase -0.0502745
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0500898
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0499243
SLMAP sarcolemma associated protein -0.0491318
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0486373
TMEM123 transmembrane protein 123 -0.0485048
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.047905
ERBIN erbb2 interacting protein -0.0478041
PRRC2C proline-rich coiled-coil 2C -0.047687
ZFAND3 zinc finger, AN1-type domain 3 -0.0476633
TXNIP thioredoxin interacting protein -0.0472825
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0470542
ANTXR2 anthrax toxin receptor 2 -0.0446072
UBAP1 ubiquitin associated protein 1 -0.0437864
SRPK2 SRSF protein kinase 2 -0.0435045
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0432804
PERP PERP, TP53 apoptosis effector -0.0432708
ZNF609 zinc finger protein 609 -0.0429174
INTS6 integrator complex subunit 6 -0.0425458
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0422608
SEC31A SEC31 homolog A (S. cerevisiae) -0.0421942
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0419815
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0411443
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.0404746
RPS11 ribosomal protein S11 -0.0401105
PARD3 par-3 family cell polarity regulator -0.0400917
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0398117
CYTH1 cytohesin 1 -0.0397991
CCNI cyclin I -0.0397476
SPATS2 spermatogenesis associated, serine-rich 2 -0.0396083
STAU1 staufen double-stranded RNA binding protein 1 -0.0392387
ANKRD12 ankyrin repeat domain 12 -0.0387649
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0387089
CCDC6 coiled-coil domain containing 6 -0.0385597
GDF15 growth differentiation factor 15 -0.038403
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0382526
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0380844
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0377984
RPS29 ribosomal protein S29 -0.0368768
TMOD3 tropomodulin 3 (ubiquitous) -0.0367427
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0365431
GCC2 GRIP and coiled-coil domain containing 2 -0.03624
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0360359
PARP8 poly (ADP-ribose) polymerase family, member 8 -0.0360296
RPS4X ribosomal protein S4, X-linked -0.0356701
BTG1 B-cell translocation gene 1, anti-proliferative -0.0356508
WASL Wiskott-Aldrich syndrome-like -0.0356417
FTH1 ferritin, heavy polypeptide 1 -0.0356116
PKM pyruvate kinase, muscle -0.0353974
PLAUR plasminogen activator, urokinase receptor -0.0353277
ZNF217 zinc finger protein 217 -0.0348288
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0344759
FRYL FRY-like -0.0343603
FBXL20 F-box and leucine-rich repeat protein 20 -0.0341128
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0340039
GPC6 glypican 6 -0.0339155
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0334474
PDIA3 protein disulfide isomerase family A, member 3 -0.0334234
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0333095
LAMB1 laminin, beta 1 -0.0332033
NCOA2 nuclear receptor coactivator 2 -0.0328988
PHF21A PHD finger protein 21A -0.0327779
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0326013
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0315249
TAOK3 TAO kinase 3 -0.031459
YAP1 Yes-associated protein 1 -0.0313351
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0313248
MYO6 myosin VI -0.0310506
BAZ1A bromodomain adjacent to zinc finger domain, 1A -0.0306322
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0305956
EMP1 epithelial membrane protein 1 -0.0304699
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0303878
CD44 CD44 molecule (Indian blood group) -0.0303391
EPB41L5 erythrocyte membrane protein band 4.1 like 5 -0.0302706
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2 -0.0302684
SRP54 signal recognition particle 54kDa -0.0302296