Fumaric acid_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.133269
IGFBP3 insulin-like growth factor binding protein 3 0.0971602
TMSB10 thymosin beta 10 0.0885423
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0884655
RPL3 ribosomal protein L3 0.0874644
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0855973
NONO non-POU domain containing, octamer-binding 0.0825613
DST dystonin 0.0811586
EFNA5 ephrin-A5 0.0767413
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0761303
TNIP1 TNFAIP3 interacting protein 1 0.074947
LOC112694756 uncharaterized LOC112694756 0.063657
MCL1 myeloid cell leukemia 1 0.0628135
TBXT T-box transcription factor T 0.0591154
TRIO trio Rho guanine nucleotide exchange factor 0.0586767
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0564443
MSN moesin 0.0547614
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0535592
NCOR2 nuclear receptor corepressor 2 0.0516094
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0513369
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0485623
MAML3 mastermind-like 3 (Drosophila) 0.0473207
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0470118
B2M beta-2-microglobulin 0.0459651
PSD3 pleckstrin and Sec7 domain containing 3 0.0456619
GRAMD1B GRAM domain containing 1B 0.0452572
FLNB filamin B, beta 0.0448245
HDAC4 histone deacetylase 4 0.0446336
PGK1 phosphoglycerate kinase 1 0.0439089
EEF1G eukaryotic translation elongation factor 1 gamma 0.0425401
RLIM ring finger protein, LIM domain interacting 0.0413008
DDIT4 DNA-damage-inducible transcript 4 0.0408732
PCBP2 poly(rC) binding protein 2 0.0407714
SRRM2 serine/arginine repetitive matrix 2 0.0402848
MYH9 myosin, heavy chain 9, non-muscle 0.0397434
YBX1 Y box binding protein 1 0.0392878
FLNA filamin A, alpha 0.0391588
HLA-A major histocompatibility complex, class I, A 0.0390902
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0387582
HSPA8 heat shock 70kDa protein 8 0.0383711
YBX3 Y box binding protein 3 0.037263
RPL23 ribosomal protein L23 0.0372071
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0368285
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.036167
CDH13 cadherin 13 0.0360478
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0355856
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0355041
PRELID2 PRELI domain containing 2 0.0351829
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0348581
TMSB4X thymosin beta 4, X-linked 0.0347075
CTIF CBP80/20-dependent translation initiation factor 0.0346933
ANXA1 annexin A1 0.034644
PTPRM protein tyrosine phosphatase, receptor type, M 0.0334465
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0334393
CCL5 chemokine (C-C motif) ligand 5 0.0329639
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0324863
SMOC1 SPARC related modular calcium binding 1 0.0321673
BHLHE40 basic helix-loop-helix family, member e40 0.0320365
LIMCH1 LIM and calponin homology domains 1 0.0318277
DENND1A DENN/MADD domain containing 1A 0.0309684
RPL11 ribosomal protein L11 0.0307891
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0306843
GIGYF2 GRB10 interacting GYF protein 2 0.0303163
APLP2 amyloid beta (A4) precursor-like protein 2 0.0300726
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0300098
HLA-B major histocompatibility complex, class I, B 0.0298903
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0293154
RPL35A ribosomal protein L35a 0.0288803
TPM3 tropomyosin 3 0.028537
AUTS2 autism susceptibility candidate 2 0.0284674
DNER delta/notch-like EGF repeat containing 0.0284044
LDHA lactate dehydrogenase A 0.0281151
MORF4L2 mortality factor 4 like 2 0.0279996
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0274568
ACTG1 actin gamma 1 0.0274277
RPL37 ribosomal protein L37 0.0273941
NFE2L1 nuclear factor, erythroid 2-like 1 0.0273185
RPL35 ribosomal protein L35 0.027279
SET SET nuclear proto-oncogene 0.0267998
CTSL cathepsin L 0.0266995
UBA1 ubiquitin-like modifier activating enzyme 1 0.0261441
HYOU1 hypoxia up-regulated 1 0.0259705
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0256371
ARGLU1 arginine and glutamate rich 1 0.025517
EZR ezrin 0.0254837
PYGL phosphorylase, glycogen, liver 0.0253756
ANKRD11 ankyrin repeat domain 11 0.0252646
PKM pyruvate kinase, muscle 0.0251614
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.025139
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0248192
GLRX glutaredoxin (thioltransferase) 0.0248125
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0244582
RACK1 receptor for activated C kinase 1 0.0244515
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0244498
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0244391
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0242913
KMT2D lysine (K)-specific methyltransferase 2D 0.0240688
RERE arginine-glutamic acid dipeptide (RE) repeats 0.023811
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.0237641
CEP250 centrosomal protein 250kDa 0.0237546

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.166048
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.164612
GDA guanine deaminase -0.151174
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.132595
COL5A2 collagen, type V, alpha 2 -0.0909805
TM4SF1 transmembrane 4 L six family member 1 -0.0764262
PDE4D phosphodiesterase 4D, cAMP-specific -0.0742229
PDLIM5 PDZ and LIM domain 5 -0.0688766
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0682018
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0655822
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.063155
TFPI2 tissue factor pathway inhibitor 2 -0.0610431
KYNU kynureninase -0.0588909
NAMPT nicotinamide phosphoribosyltransferase -0.050593
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0493788
SMYD3 SET and MYND domain containing 3 -0.0481691
FNDC3A fibronectin type III domain containing 3A -0.0471944
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0438024
ZEB2 zinc finger E-box binding homeobox 2 -0.0429167
NCOA7 nuclear receptor coactivator 7 -0.0408046
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0402728
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0398503
TPT1 tumor protein, translationally-controlled 1 -0.0392036
AGTPBP1 ATP/GTP binding protein 1 -0.0389023
SLC39A8 solute carrier family 39 (zinc transporter), member 8 -0.0383752
TXNRD1 thioredoxin reductase 1 -0.0382909
NTN4 netrin 4 -0.0382793
SRGN serglycin -0.0375951
NEK7 NIMA-related kinase 7 -0.0370172
BMERB1 bMERB domain containing 1 -0.0367627
OSMR oncostatin M receptor -0.0366023
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0364442
TNPO1 transportin 1 -0.0341626
ATAD1 ATPase family, AAA domain containing 1 -0.0337515
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0333677
P3H2 prolyl 3-hydroxylase 2 -0.0326388
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0306755
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0300131
NT5C2 5'-nucleotidase, cytosolic II -0.0296699
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0290902
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0277107
COL4A5 collagen, type IV, alpha 5 -0.0272105
DGKD diacylglycerol kinase, delta 130kDa -0.0267993
INHBA inhibin, beta A -0.0266022
SH3KBP1 SH3-domain kinase binding protein 1 -0.0262954
TGFBI transforming growth factor, beta-induced, 68kDa -0.02629
CD109 CD109 molecule -0.0253095
JMJD1C jumonji domain containing 1C -0.0252549
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0249575
RPS23 ribosomal protein S23 -0.0231837
IER3 immediate early response 3 -0.0231685
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0227563
AKR1C1 aldo-keto reductase family 1, member C1 -0.022419
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0221284
ANKHD1 ankyrin repeat and KH domain containing 1 -0.021888
NFX1 nuclear transcription factor, X-box binding 1 -0.0217962
ZBTB38 zinc finger and BTB domain containing 38 -0.0217917
ENAH enabled homolog (Drosophila) -0.0216284
IARS1 isoleucyl-tRNA synthetase 1 -0.0211186
WSB1 WD repeat and SOCS box containing 1 -0.0207989
FN1 fibronectin 1 -0.0202769
VIM vimentin -0.020091
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0198782
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 -0.0197405
TUSC3 tumor suppressor candidate 3 -0.0192011
RPS2 ribosomal protein S2 -0.0189153
NF1 neurofibromin 1 -0.0187581
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0186873
PALLD palladin, cytoskeletal associated protein -0.0183094
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0180938
PDE10A phosphodiesterase 10A -0.0180185
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0179397
CCDC68 coiled-coil domain containing 68 -0.017862
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0177871
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0176396
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0175141
EXT1 exostosin glycosyltransferase 1 -0.0175086
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0172192
IFIH1 interferon induced with helicase C domain 1 -0.0171004
LPGAT1 lysophosphatidylglycerol acyltransferase 1 -0.0169544
ZC3H12C zinc finger CCCH-type containing 12C -0.0167787
SLC38A2 solute carrier family 38, member 2 -0.0167467
PRKD3 protein kinase D3 -0.0167398
LMAN1 lectin, mannose-binding, 1 -0.0166961
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0165342
CD44 CD44 molecule (Indian blood group) -0.0165125
DNAH14 dynein, axonemal, heavy chain 14 -0.0163404
IFI16 interferon, gamma-inducible protein 16 -0.0163198
DPP10 dipeptidyl-peptidase 10 (non-functional) -0.0162664
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0162629
EIF5B eukaryotic translation initiation factor 5B -0.0162332
ACBD6 acyl-CoA binding domain containing 6 -0.0161324
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0161091
MON2 MON2 homolog (S. cerevisiae) -0.0160975
GNAS GNAS complex locus -0.0159276
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0153792
GPHN gephyrin -0.0151624
UBXN4 UBX domain protein 4 -0.0150613
FBXL13 F-box and leucine-rich repeat protein 13 -0.0150216
BPTF bromodomain PHD finger transcription factor -0.0150119