Fumaric acid_Panc 03.27 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in Panc 03.27 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_Panc 03.27 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HLA-B major histocompatibility complex, class I, B 0.164774
KRT8 keratin 8, type II 0.128853
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.117362
TMSB4X thymosin beta 4, X-linked 0.116983
LAMB3 laminin, beta 3 0.108121
TNIP1 TNFAIP3 interacting protein 1 0.105113
MYH9 myosin, heavy chain 9, non-muscle 0.103135
PLAU plasminogen activator, urokinase 0.102054
NDRG1 N-myc downstream regulated 1 0.0888692
LOC112694756 uncharaterized LOC112694756 0.0880958
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0867036
PLEC plectin 0.0774319
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0744709
BHLHE40 basic helix-loop-helix family, member e40 0.0738973
MACF1 microtubule-actin crosslinking factor 1 0.0714768
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0703951
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0701393
KRT18 keratin 18, type I 0.0693047
TRIO trio Rho guanine nucleotide exchange factor 0.0680698
NAV2 neuron navigator 2 0.0654065
SMAD3 SMAD family member 3 0.0644059
TMSB10 thymosin beta 10 0.0637246
HLA-C major histocompatibility complex, class I, C 0.0636873
KRT7 keratin 7, type II 0.0633709
ANXA11 annexin A11 0.0620568
CD59 CD59 molecule, complement regulatory protein 0.0590902
B2M beta-2-microglobulin 0.0575679
LDHA lactate dehydrogenase A 0.0559486
PLAUR plasminogen activator, urokinase receptor 0.0541619
DDIT4 DNA-damage-inducible transcript 4 0.0534764
NONO non-POU domain containing, octamer-binding 0.0522042
PGK1 phosphoglycerate kinase 1 0.0521645
NUMA1 nuclear mitotic apparatus protein 1 0.0521446
EIF4A2 eukaryotic translation initiation factor 4A2 0.0520312
VEGFA vascular endothelial growth factor A 0.0503472
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0500365
AFDN afadin, adherens junction formation factor 0.0488566
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0478658
SQSTM1 sequestosome 1 0.0476382
HLA-A major histocompatibility complex, class I, A 0.0460521
UBE2H ubiquitin-conjugating enzyme E2H 0.0457273
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0449223
FOSL1 FOS-like antigen 1 0.0438304
ARGLU1 arginine and glutamate rich 1 0.043421
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0426336
RPL3 ribosomal protein L3 0.0424978
KDM3A lysine (K)-specific demethylase 3A 0.0418722
TGM2 transglutaminase 2 0.0414268
SDC4 syndecan 4 0.0404915
YBX3 Y box binding protein 3 0.0396414
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0387748
EEF2 eukaryotic translation elongation factor 2 0.0387297
ARRDC3 arrestin domain containing 3 0.0384007
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0378307
NAMPT nicotinamide phosphoribosyltransferase 0.0374307
AHNAK AHNAK nucleoprotein 0.0364773
AFAP1 actin filament associated protein 1 0.0361094
FNDC3B fibronectin type III domain containing 3B 0.0359267
G0S2 G0/G1 switch 2 0.0358474
EZR ezrin 0.0354769
LAMC2 laminin, gamma 2 0.035073
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0349842
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0341456
IGFBP3 insulin-like growth factor binding protein 3 0.0340681
RLIM ring finger protein, LIM domain interacting 0.0332512
SRRM2 serine/arginine repetitive matrix 2 0.0331892
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0329845
OGA O-GlcNAcase 0.0329603
YBX1 Y box binding protein 1 0.0327679
ADAR adenosine deaminase, RNA-specific 0.0322368
MPRIP myosin phosphatase Rho interacting protein 0.0321359
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0318256
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0316347
TSC22D2 TSC22 domain family, member 2 0.0314711
CTNND1 catenin (cadherin-associated protein), delta 1 0.0314162
FLNB filamin B, beta 0.0313229
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0312857
MYO5B myosin VB 0.0311815
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0309518
RNF213 ring finger protein 213 0.0308947
CNOT12 CCR4-NOT transcription complex subunit 12 0.0306577
MED15 mediator complex subunit 15 0.0304256
GRB10 growth factor receptor-bound protein 10 0.0302155
ANKRD11 ankyrin repeat domain 11 0.0297939
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0295429
TJP2 tight junction protein 2 0.0294876
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0292144
TPM4 tropomyosin 4 0.0289859
PLAT plasminogen activator, tissue 0.0289085
PKM pyruvate kinase, muscle 0.0285062
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0284348
RAD21 RAD21 homolog (S. pombe) 0.0281199
WDR45B WD repeat domain 45B 0.028042
ERRFI1 ERBB receptor feedback inhibitor 1 0.0279384
EFHD2 EF-hand domain family, member D2 0.027795
CPNE1 copine I 0.0276261
NPEPPS aminopeptidase puromycin sensitive 0.0272697
CEP250 centrosomal protein 250kDa 0.0270434
NIBAN2 niban apoptosis regulator 2 0.0270134
COPG1 coatomer protein complex, subunit gamma 1 0.0266817

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.297441
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0812144
INTS6 integrator complex subunit 6 -0.0707065
HMGA1 high mobility group AT-hook 1 -0.066217
ZBTB20 zinc finger and BTB domain containing 20 -0.0647904
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0638988
TM4SF1 transmembrane 4 L six family member 1 -0.0541559
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0535171
LMO7 LIM domain 7 -0.0532013
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0504288
MBNL1 muscleblind-like splicing regulator 1 -0.0486161
ANXA2 annexin A2 -0.0450508
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.042541
GOLGB1 golgin B1 -0.0414428
EGFR epidermal growth factor receptor -0.041339
PLSCR1 phospholipid scramblase 1 -0.038801
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.038486
TPT1 tumor protein, translationally-controlled 1 -0.0384554
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0375457
PHF3 PHD finger protein 3 -0.0362236
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0356386
EFNA5 ephrin-A5 -0.0351466
BPTF bromodomain PHD finger transcription factor -0.0332951
AKAP9 A kinase (PRKA) anchor protein 9 -0.0326435
PDLIM5 PDZ and LIM domain 5 -0.0326356
DSG2 desmoglein 2 -0.0324572
GOLGA4 golgin A4 -0.0315859
SMC4 structural maintenance of chromosomes 4 -0.03069
RPS8 ribosomal protein S8 -0.0294282
GATAD2A GATA zinc finger domain containing 2A -0.0292032
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0290819
PATJ PATJ crumbs cell polarity complex component -0.0288374
POTEF POTE ankyrin domain family, member F -0.0282729
CDK13 cyclin-dependent kinase 13 -0.0280557
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0279401
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0273721
EHBP1 EH domain binding protein 1 -0.0266497
MBD5 methyl-CpG binding domain protein 5 -0.0262172
RPS15 ribosomal protein S15 -0.0261777
CANX calnexin -0.025903
SENP5 SUMO1/sentrin specific peptidase 5 -0.0258247
RASAL2 RAS protein activator like 2 -0.0254573
ANKRD17 ankyrin repeat domain 17 -0.0252533
MTDH metadherin -0.0250465
USP34 ubiquitin specific peptidase 34 -0.0250275
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0247819
DIAPH3 diaphanous-related formin 3 -0.024748
HMGB1 high mobility group box 1 -0.0245276
RPL21 ribosomal protein L21 -0.0244464
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0244007
CLDN1 claudin 1 -0.024366
TCF12 transcription factor 12 -0.0241801
ALCAM activated leukocyte cell adhesion molecule -0.0239173
PTMA prothymosin, alpha -0.0238536
NF1 neurofibromin 1 -0.0236049
RPS27A ribosomal protein S27a -0.0234759
DEK DEK proto-oncogene -0.0232104
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0231371
EIF5B eukaryotic translation initiation factor 5B -0.0231276
CD2AP CD2-associated protein -0.0230925
RBMS2 RNA binding motif, single stranded interacting protein 2 -0.0228355
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0227906
MKI67 marker of proliferation Ki-67 -0.0226532
FN1 fibronectin 1 -0.0225008
FBXL20 F-box and leucine-rich repeat protein 20 -0.0223418
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0222099
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0220738
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0217992
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0217474
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0217226
ERBIN erbb2 interacting protein -0.0216263
ANKRD28 ankyrin repeat domain 28 -0.0215748
ARHGAP29 Rho GTPase activating protein 29 -0.0214875
C6ORF62 chromosome 6 open reading frame 62 -0.0214576
ZDHHC13 zinc finger, DHHC-type containing 13 -0.0213526
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0211611
RABGAP1L RAB GTPase activating protein 1-like -0.0208474
RTN3 reticulon 3 -0.0207166
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.0206042
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0204969
RPL8 ribosomal protein L8 -0.0204861
ZNF638 zinc finger protein 638 -0.0204345
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0203592
NABP1 nucleic acid binding protein 1 -0.0203446
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.020312
RAB7A RAB7A, member RAS oncogene family -0.0202426
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0202256
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0202048
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0202024
FAF1 Fas (TNFRSF6) associated factor 1 -0.019995
GNAS GNAS complex locus -0.0199661
MAP4 microtubule-associated protein 4 -0.0199397
RTKN2 rhotekin 2 -0.0198838
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0195923
NIPBL Nipped-B homolog (Drosophila) -0.0194573
TTC17 tetratricopeptide repeat domain 17 -0.0193383
ARID4B AT rich interactive domain 4B (RBP1-like) -0.019257
TAS2R14 taste receptor, type 2, member 14 -0.0191931
SLC38A2 solute carrier family 38, member 2 -0.0191054
ITCH itchy E3 ubiquitin protein ligase -0.0190935