Fumaric acid_SW1417 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in SW1417 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_SW1417 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KRT8 keratin 8, type II 0.208679
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.111555
KRT18 keratin 18, type I 0.107676
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0862195
PLEC plectin 0.0840435
EEF2 eukaryotic translation elongation factor 2 0.0821418
MYH9 myosin, heavy chain 9, non-muscle 0.0775675
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.075468
TMSB10 thymosin beta 10 0.0717529
LOC112694756 uncharaterized LOC112694756 0.0584784
SRRM2 serine/arginine repetitive matrix 2 0.0577226
NONO non-POU domain containing, octamer-binding 0.0558671
HSPA8 heat shock 70kDa protein 8 0.0553533
TMSB4X thymosin beta 4, X-linked 0.0527604
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0514965
TNIP1 TNFAIP3 interacting protein 1 0.0514415
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0508984
ANXA11 annexin A11 0.0505635
PTMA prothymosin, alpha 0.0498662
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0483535
NUMA1 nuclear mitotic apparatus protein 1 0.047894
RPL3 ribosomal protein L3 0.0474254
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0472969
PGK1 phosphoglycerate kinase 1 0.0469078
FLNA filamin A, alpha 0.0454477
B2M beta-2-microglobulin 0.0450305
NDRG1 N-myc downstream regulated 1 0.0445478
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0438314
ACTN4 actinin, alpha 4 0.0437858
FXR1 fragile X mental retardation, autosomal homolog 1 0.0424655
EZR ezrin 0.0421067
EWSR1 EWS RNA-binding protein 1 0.0418467
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0417967
VEGFA vascular endothelial growth factor A 0.0398934
FOSL1 FOS-like antigen 1 0.0379029
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0378246
MXD1 MAX dimerization protein 1 0.0360822
MKRN1 makorin ring finger protein 1 0.0360232
EEF1G eukaryotic translation elongation factor 1 gamma 0.0356929
ARGLU1 arginine and glutamate rich 1 0.0356004
BHLHE40 basic helix-loop-helix family, member e40 0.0351923
MYO5B myosin VB 0.0351305
PCBP2 poly(rC) binding protein 2 0.0345756
YBX1 Y box binding protein 1 0.034202
RPL23 ribosomal protein L23 0.0339004
RAD23B RAD23 homolog B (S. cerevisiae) 0.0330793
TSC22D2 TSC22 domain family, member 2 0.033008
TRIO trio Rho guanine nucleotide exchange factor 0.0328656
CTNND1 catenin (cadherin-associated protein), delta 1 0.0323915
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0323394
ANKRD11 ankyrin repeat domain 11 0.0322033
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0316106
EIF4A2 eukaryotic translation initiation factor 4A2 0.0315932
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0311561
DIDO1 death inducer-obliterator 1 0.0309928
LENG8 leukocyte receptor cluster (LRC) member 8 0.0306651
CEP250 centrosomal protein 250kDa 0.0301806
NPTN neuroplastin 0.0301622
CXXC5 CXXC finger protein 5 0.0300964
MYH14 myosin, heavy chain 14, non-muscle 0.0299815
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0298331
KDM3A lysine (K)-specific demethylase 3A 0.0296999
RPS19 ribosomal protein S19 0.0295275
ADM adrenomedullin 0.0294204
PLAUR plasminogen activator, urokinase receptor 0.0292191
SET SET nuclear proto-oncogene 0.029127
ESYT2 extended synaptotagmin-like protein 2 0.0291215
PKM pyruvate kinase, muscle 0.0289526
DSPP dentin sialophosphoprotein 0.0281154
AFDN afadin, adherens junction formation factor 0.0278303
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0277855
HLA-A major histocompatibility complex, class I, A 0.0270233
DDIT4 DNA-damage-inducible transcript 4 0.0270069
AMOTL2 angiomotin like 2 0.0269902
NR1D2 nuclear receptor subfamily 1, group D, member 2 0.0269655
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.026925
NCOR2 nuclear receptor corepressor 2 0.0268758
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0267114
TRA2B transformer 2 beta homolog (Drosophila) 0.0266737
MYO10 myosin X 0.0265171
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0263269
TPM3 tropomyosin 3 0.0261097
APLP2 amyloid beta (A4) precursor-like protein 2 0.0260023
HLA-C major histocompatibility complex, class I, C 0.0256891
TINAGL1 tubulointerstitial nephritis antigen-like 1 0.025299
SF1 splicing factor 1 0.0252237
BCL9L B-cell CLL/lymphoma 9-like 0.025156
CNOT12 CCR4-NOT transcription complex subunit 12 0.0251176
HOXB6 homeobox B6 0.0250974
ADAM17 ADAM metallopeptidase domain 17 0.0250806
JUN jun proto-oncogene 0.0249466
SFTPA2 surfactant protein A2 0.0243947
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0243911
PRPF38B pre-mRNA processing factor 38B 0.0242983
PRELID3B PRELI domain containing 3B 0.0241811
CST3 cystatin C 0.0239817
HYOU1 hypoxia up-regulated 1 0.0239617
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0239504
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0239347
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0238884

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0899501
EHBP1 EH domain binding protein 1 -0.0711712
NCEH1 neutral cholesterol ester hydrolase 1 -0.0678197
NEBL nebulette -0.0648998
ZBTB20 zinc finger and BTB domain containing 20 -0.0637353
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0626446
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0605378
MAML2 mastermind-like 2 (Drosophila) -0.06035
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0602336
CDK13 cyclin-dependent kinase 13 -0.0581875
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0552521
JMJD1C jumonji domain containing 1C -0.0526355
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0499201
GNAS GNAS complex locus -0.0498163
PATJ PATJ crumbs cell polarity complex component -0.0459896
STAU1 staufen double-stranded RNA binding protein 1 -0.0455134
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0444627
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0432227
TPT1 tumor protein, translationally-controlled 1 -0.0429071
PTPRK protein tyrosine phosphatase, receptor type, K -0.0425685
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0420281
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0414985
CCND1 cyclin D1 -0.0412785
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0400675
PLSCR1 phospholipid scramblase 1 -0.0399813
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.039899
IER3 immediate early response 3 -0.0397926
GCC2 GRIP and coiled-coil domain containing 2 -0.0395673
MACC1 metastasis associated in colon cancer 1 -0.0387701
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0384407
GOLGB1 golgin B1 -0.0378764
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0376735
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0374079
IARS1 isoleucyl-tRNA synthetase 1 -0.0366886
CADPS Ca++-dependent secretion activator -0.0353494
CD2AP CD2-associated protein -0.0353392
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0352334
ZBTB38 zinc finger and BTB domain containing 38 -0.035132
GOLGA4 golgin A4 -0.0350494
ZMYND8 zinc finger, MYND-type containing 8 -0.0346418
MAP4 microtubule-associated protein 4 -0.0341806
GPHN gephyrin -0.0341554
MYO1E myosin IE -0.0340958
DLG1 discs, large homolog 1 (Drosophila) -0.0338518
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0329779
RAB7A RAB7A, member RAS oncogene family -0.0325774
NF1 neurofibromin 1 -0.0323753
PKP4 plakophilin 4 -0.0322369
TAS2R14 taste receptor, type 2, member 14 -0.0320984
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0319638
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0306608
EXOC4 exocyst complex component 4 -0.0306123
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 -0.03035
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0301436
SLC38A1 solute carrier family 38, member 1 -0.0299788
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0299085
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0294841
CUX1 cut-like homeobox 1 -0.0291078
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0289227
SENP5 SUMO1/sentrin specific peptidase 5 -0.0286859
ETV6 ets variant 6 -0.028506
GMDS GDP-mannose 4,6-dehydratase -0.0284729
TMEM123 transmembrane protein 123 -0.0282634
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0276981
NKD1 naked cuticle homolog 1 (Drosophila) -0.0274558
ADNP activity-dependent neuroprotector homeobox -0.0274345
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0264053
VCL vinculin -0.0259591
PCLO piccolo presynaptic cytomatrix protein -0.0257132
NIPBL Nipped-B homolog (Drosophila) -0.0256907
CANX calnexin -0.0255147
FBXO11 F-box protein 11 -0.0254626
PCSK5 proprotein convertase subtilisin/kexin type 5 -0.0251758
USP34 ubiquitin specific peptidase 34 -0.0246916
HM13 histocompatibility (minor) 13 -0.0245876
NFIA nuclear factor I/A -0.024317
TCF12 transcription factor 12 -0.0241718
FNDC3A fibronectin type III domain containing 3A -0.0239965
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0239347
SMAD2 SMAD family member 2 -0.0238461
PHF14 PHD finger protein 14 -0.0238436
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0234885
NRP1 neuropilin 1 -0.023473
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0233591
TOP1 topoisomerase (DNA) I -0.02332
MX2 MX dynamin-like GTPase 2 -0.0232735
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0232254
GPATCH8 G patch domain containing 8 -0.023094
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0230907
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0230376
COG5 component of oligomeric golgi complex 5 -0.0229742
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0229186
ANKRD17 ankyrin repeat domain 17 -0.0227983
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0226825
SBF2 SET binding factor 2 -0.0225844
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0224296
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.022384
RTN3 reticulon 3 -0.0222949
RSL1D1 ribosomal L1 domain containing 1 -0.0221088
CDK12 cyclin-dependent kinase 12 -0.0219718