Fumaric acid_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fumaric acid perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fumaric acid_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.169656
EEF2 eukaryotic translation elongation factor 2 0.141763
EZR ezrin 0.12226
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.109567
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.107935
RPL3 ribosomal protein L3 0.106147
HSPA8 heat shock 70kDa protein 8 0.100665
SRRM2 serine/arginine repetitive matrix 2 0.0916504
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.074431
EPHA2 EPH receptor A2 0.0665325
PLAUR plasminogen activator, urokinase receptor 0.065038
MYH9 myosin, heavy chain 9, non-muscle 0.0645666
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0595402
CD9 CD9 molecule 0.0587885
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0576839
FOSL1 FOS-like antigen 1 0.0549911
ANXA1 annexin A1 0.0538384
EGR1 early growth response 1 0.0537735
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0533456
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.053098
LAMC2 laminin, gamma 2 0.0516634
MPRIP myosin phosphatase Rho interacting protein 0.0510946
EEF1G eukaryotic translation elongation factor 1 gamma 0.0498424
ANKRD11 ankyrin repeat domain 11 0.0490885
FERMT1 fermitin family member 1 0.0479082
ANXA11 annexin A11 0.0466073
LOC112694756 uncharaterized LOC112694756 0.0449281
PTMA prothymosin, alpha 0.0446558
KRT8 keratin 8, type II 0.0437694
NIBAN2 niban apoptosis regulator 2 0.043653
NONO non-POU domain containing, octamer-binding 0.0429588
ACTN4 actinin, alpha 4 0.0412547
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor 0.0411337
DSPP dentin sialophosphoprotein 0.0405296
RPL4 ribosomal protein L4 0.0401701
AREG amphiregulin 0.0400925
SET SET nuclear proto-oncogene 0.0393446
MIDEAS mitotic deacetylase associated SANT domain protein 0.039123
BMP4 bone morphogenetic protein 4 0.0372371
LOC102724023 ES1 protein homolog, mitochondrial 0.0372001
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0366736
NCOR2 nuclear receptor corepressor 2 0.0363256
NDRG1 N-myc downstream regulated 1 0.0361637
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0358656
AXIN2 axin 2 0.0353364
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0346098
FAT1 FAT atypical cadherin 1 0.0344293
TNIP1 TNFAIP3 interacting protein 1 0.0340214
PFKP phosphofructokinase, platelet 0.0336516
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0321821
ITPRID2 ITPR interacting domain containing 2 0.0320504
PLEC plectin 0.032048
DDIT4 DNA-damage-inducible transcript 4 0.031709
ARGLU1 arginine and glutamate rich 1 0.0313432
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0306452
NUMA1 nuclear mitotic apparatus protein 1 0.0303282
EIF4B eukaryotic translation initiation factor 4B 0.030324
RPS3 ribosomal protein S3 0.0298568
SNX9 sorting nexin 9 0.0295652
HLA-B major histocompatibility complex, class I, B 0.0293797
ITGB4 integrin, beta 4 0.0287416
LAMB3 laminin, beta 3 0.0287163
S100A6 S100 calcium binding protein A6 0.028705
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0284927
RPS17 ribosomal protein S17 0.0282907
RPS18 ribosomal protein S18 0.0275848
IGFBP3 insulin-like growth factor binding protein 3 0.0274215
APP amyloid beta (A4) precursor protein 0.0272744
LMNA lamin A/C 0.0272474
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0270872
SND1 staphylococcal nuclease and tudor domain containing 1 0.0268611
SREBF2 sterol regulatory element binding transcription factor 2 0.0267536
EIF4H eukaryotic translation initiation factor 4H 0.0266538
MTUS1 microtubule associated tumor suppressor 1 0.0264827
CHD7 chromodomain helicase DNA binding protein 7 0.0262185
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0260708
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0260038
MYO5B myosin VB 0.0257624
TSC22D2 TSC22 domain family, member 2 0.0257243
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0254328
TBCD tubulin folding cofactor D 0.0253912
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0253526
RPL37 ribosomal protein L37 0.025065
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0249951
PNN pinin, desmosome associated protein 0.0249396
FLNA filamin A, alpha 0.0248392
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0246968
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0244058
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.024251
BCL9L B-cell CLL/lymphoma 9-like 0.0241134
KDM6A lysine (K)-specific demethylase 6A 0.0239673
PCBP2 poly(rC) binding protein 2 0.0239079
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0237713
ACTG1 actin gamma 1 0.0237596
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0237525
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.023685
KLF3 Kruppel-like factor 3 (basic) 0.0235537
SF1 splicing factor 1 0.023482
TPM4 tropomyosin 4 0.023262
VEGFA vascular endothelial growth factor A 0.02321

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.278352
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.202694
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.169253
IER3 immediate early response 3 -0.134161
TPT1 tumor protein, translationally-controlled 1 -0.0896707
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0767241
VCL vinculin -0.0646558
IARS1 isoleucyl-tRNA synthetase 1 -0.0598741
RPS24 ribosomal protein S24 -0.0592717
GPHN gephyrin -0.0535873
EGFR epidermal growth factor receptor -0.0500131
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0437996
MTAP methylthioadenosine phosphorylase -0.0417715
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0401305
FHL2 four and a half LIM domains 2 -0.0386266
GOLGA4 golgin A4 -0.0383198
GDF15 growth differentiation factor 15 -0.0361268
CANX calnexin -0.0350441
COG5 component of oligomeric golgi complex 5 -0.0350219
CDK13 cyclin-dependent kinase 13 -0.0348101
ANKRD17 ankyrin repeat domain 17 -0.0321606
SGPP2 sphingosine-1-phosphate phosphatase 2 -0.0317791
NIPBL Nipped-B homolog (Drosophila) -0.030481
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0292044
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0290759
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0284594
CAMKMT calmodulin-lysine N-methyltransferase -0.0281559
RPL34 ribosomal protein L34 -0.0277214
TOP1 topoisomerase (DNA) I -0.0274641
TNPO1 transportin 1 -0.0266747
RAB10 RAB10, member RAS oncogene family -0.0266419
RTN3 reticulon 3 -0.0265279
TTC3 tetratricopeptide repeat domain 3 -0.0264271
SEC24D SEC24 family member D -0.0263127
CCSER1 coiled-coil serine-rich protein 1 -0.0262773
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0262747
MAP4 microtubule-associated protein 4 -0.0260155
RPLP1 ribosomal protein, large, P1 -0.0258848
HMGA1 high mobility group AT-hook 1 -0.025477
ECT2 epithelial cell transforming 2 -0.0245921
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0244911
SEC31A SEC31 homolog A (S. cerevisiae) -0.0243005
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0239534
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0238558
EXOC6B exocyst complex component 6B -0.0238517
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0231269
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0230706
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0229677
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0229073
RPS15 ribosomal protein S15 -0.0227741
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0227419
UBC ubiquitin C -0.0224534
TAS2R14 taste receptor, type 2, member 14 -0.0222631
R3HDM1 R3H domain containing 1 -0.0219956
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0217804
RAB7A RAB7A, member RAS oncogene family -0.0216843
EFNB2 ephrin-B2 -0.0216308
HMGB1 high mobility group box 1 -0.0215726
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0211404
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0210451
TARS1 threonyl-tRNA synthetase 1 -0.0209597
MON2 MON2 homolog (S. cerevisiae) -0.0206868
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0206791
PDE4D phosphodiesterase 4D, cAMP-specific -0.0203575
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0202757
RBM25 RNA binding motif protein 25 -0.020171
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme -0.0201542
MBNL1 muscleblind-like splicing regulator 1 -0.01995
ARMH4 armadillo like helical domain containing 4 -0.0196758
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.01955
DSG2 desmoglein 2 -0.0194911
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0194407
TAOK1 TAO kinase 1 -0.0192389
ZMYM2 zinc finger, MYM-type 2 -0.0192009
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0190158
GMDS GDP-mannose 4,6-dehydratase -0.0188456
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0188209
ARF1 ADP-ribosylation factor 1 -0.018696
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0186143
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0185897
ZNF431 zinc finger protein 431 -0.0185654
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0185308
DIAPH2 diaphanous-related formin 2 -0.0184988
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0184506
GCC2 GRIP and coiled-coil domain containing 2 -0.0184438
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) -0.0184337
DEK DEK proto-oncogene -0.018214
EFNA5 ephrin-A5 -0.0180969
CD44 CD44 molecule (Indian blood group) -0.0180956
DSCAM Down syndrome cell adhesion molecule -0.0178628
TCF12 transcription factor 12 -0.0177722
GNAT3 guanine nucleotide binding protein, alpha transducing 3 -0.0177337
GLCCI1 glucocorticoid induced 1 -0.0176818
RPS8 ribosomal protein S8 -0.0176585
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 -0.0176575
FNDC3A fibronectin type III domain containing 3A -0.0175471
PCNX4 pecanex 4 -0.0174146
KITLG KIT ligand -0.0173513
RPS11 ribosomal protein S11 -0.0173305
COG6 component of oligomeric golgi complex 6 -0.0173002