Fusidic acid_HCT15 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in HCT15 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_HCT15 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.171578
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.120907
MYH9 myosin, heavy chain 9, non-muscle 0.105418
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.101549
EZR ezrin 0.0954256
DSCAM Down syndrome cell adhesion molecule 0.0887968
PRELID2 PRELI domain containing 2 0.0873215
ENO1 enolase 1, (alpha) 0.0825651
AKAP9 A kinase (PRKA) anchor protein 9 0.0646491
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0605231
ZNF638 zinc finger protein 638 0.0576429
ASPH aspartate beta-hydroxylase 0.0537867
TXNRD1 thioredoxin reductase 1 0.0524979
HELZ helicase with zinc finger 0.0510757
PCM1 pericentriolar material 1 0.0506422
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0501634
ZFAND3 zinc finger, AN1-type domain 3 0.0497529
SFPQ splicing factor proline/glutamine-rich 0.0492686
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.048982
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0476229
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0472968
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0472114
POTEF POTE ankyrin domain family, member F 0.0468563
CALR calreticulin 0.046788
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0454045
SMYD3 SET and MYND domain containing 3 0.0452576
ATXN1 ataxin 1 0.0437353
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0436083
SRRM2 serine/arginine repetitive matrix 2 0.0435757
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.042442
KMT2C lysine (K)-specific methyltransferase 2C 0.0421638
GOLGB1 golgin B1 0.0419953
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0415613
TPM3 tropomyosin 3 0.0415237
EEF2 eukaryotic translation elongation factor 2 0.0413258
CSNK1A1 casein kinase 1, alpha 1 0.0401709
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0398699
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0398423
PDE4D phosphodiesterase 4D, cAMP-specific 0.0394301
PCBP2 poly(rC) binding protein 2 0.0388599
ANKRD36 ankyrin repeat domain 36 0.0385999
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 0.038425
EIF4B eukaryotic translation initiation factor 4B 0.038401
MACF1 microtubule-actin crosslinking factor 1 0.0383346
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0382706
ZNF292 zinc finger protein 292 0.0377349
BBX bobby sox homolog (Drosophila) 0.0371748
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0371186
APLP2 amyloid beta (A4) precursor-like protein 2 0.0370125
HYOU1 hypoxia up-regulated 1 0.036605
DST dystonin 0.0365941
AFF4 AF4/FMR2 family, member 4 0.0362321
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0360271
NEBL nebulette 0.0358161
KDM4C lysine (K)-specific demethylase 4C 0.0357703
MT2A metallothionein 2A 0.0356616
TMF1 TATA element modulatory factor 1 0.0349072
COPA coatomer protein complex, subunit alpha 0.0346141
AFDN afadin, adherens junction formation factor 0.0343702
TENM3 teneurin transmembrane protein 3 0.0343558
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.034192
VMP1 vacuole membrane protein 1 0.0340354
WDFY3 WD repeat and FYVE domain containing 3 0.0339953
SPAG9 sperm associated antigen 9 0.0335531
GIGYF2 GRB10 interacting GYF protein 2 0.0334779
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0333648
UTRN utrophin 0.0333287
WNK1 WNK lysine deficient protein kinase 1 0.0328867
SON SON DNA binding protein 0.0327969
YEATS2 YEATS domain containing 2 0.0326411
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 0.032514
PRRC2C proline-rich coiled-coil 2C 0.0324778
DSPP dentin sialophosphoprotein 0.0324289
BLTP1 bridge-like lipid transfer protein family member 1 0.0322425
EXOC6B exocyst complex component 6B 0.0320135
YTHDC1 YTH domain containing 1 0.0319226
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0314735
EIF5 eukaryotic translation initiation factor 5 0.0313653
TXNIP thioredoxin interacting protein 0.031337
ANKRD12 ankyrin repeat domain 12 0.030877
KTN1 kinectin 1 (kinesin receptor) 0.0304023
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0303955
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.030345
TLN1 talin 1 0.0300551
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0300326
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0299178
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0296639
WWC2 WW and C2 domain containing 2 0.0294412
TJP1 tight junction protein 1 0.0293352
NFE2L1 nuclear factor, erythroid 2-like 1 0.0293305
RPL3 ribosomal protein L3 0.0288855
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0287772
CANX calnexin 0.0287193
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0286368
USP9X ubiquitin specific peptidase 9, X-linked 0.0284437
MACROD2 MACRO domain containing 2 0.0280714
USP34 ubiquitin specific peptidase 34 0.0280485
RSRC2 arginine/serine-rich coiled-coil 2 0.0278029
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0274731
PLEC plectin 0.027345

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.195352
AHNAK AHNAK nucleoprotein -0.194749
NDRG1 N-myc downstream regulated 1 -0.180924
PTMA prothymosin, alpha -0.171047
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0871832
TPT1 tumor protein, translationally-controlled 1 -0.0845913
SERINC5 serine incorporator 5 -0.0759126
RPS6 ribosomal protein S6 -0.0597481
RPS24 ribosomal protein S24 -0.0588117
EGR1 early growth response 1 -0.0514823
FAT1 FAT atypical cadherin 1 -0.0474368
RPS8 ribosomal protein S8 -0.0469401
TPM4 tropomyosin 4 -0.046733
RPS25 ribosomal protein S25 -0.0461556
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0461436
FDPS farnesyl diphosphate synthase -0.045654
PATJ PATJ crumbs cell polarity complex component -0.0450628
CCND1 cyclin D1 -0.0445482
KRT18 keratin 18, type I -0.0443846
RACK1 receptor for activated C kinase 1 -0.0418771
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0408073
RPS15 ribosomal protein S15 -0.0405826
TMSB10 thymosin beta 10 -0.0396417
S100A6 S100 calcium binding protein A6 -0.0390232
TMEM123 transmembrane protein 123 -0.0383459
ACTG1 actin gamma 1 -0.0378152
S100A10 S100 calcium binding protein A10 -0.0371165
RPL7A ribosomal protein L7a -0.0357195
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0351592
CADPS Ca++-dependent secretion activator -0.0343407
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0343398
UBC ubiquitin C -0.0340687
EREG epiregulin -0.033426
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0327093
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0324546
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0319499
ITGB4 integrin, beta 4 -0.0316708
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0313692
MEF2A myocyte enhancer factor 2A -0.0307027
LLGL2 lethal giant larvae homolog 2 (Drosophila) -0.0297943
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.029755
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0293089
GNAS GNAS complex locus -0.0291334
BACE2 beta-site APP-cleaving enzyme 2 -0.0288523
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0287921
RPL31 ribosomal protein L31 -0.0285208
TUBA1B tubulin, alpha 1b -0.028518
RPL34 ribosomal protein L34 -0.0272507
HMGA1 high mobility group AT-hook 1 -0.026483
PGK1 phosphoglycerate kinase 1 -0.0264745
RPS13 ribosomal protein S13 -0.0259754
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.025962
VCL vinculin -0.0258477
DLG1 discs, large homolog 1 (Drosophila) -0.0258154
RPL11 ribosomal protein L11 -0.0256734
PALD1 phosphatase domain containing, paladin 1 -0.0249574
SNX14 sorting nexin 14 -0.024936
RPS23 ribosomal protein S23 -0.0248653
RHOBTB3 Rho-related BTB domain containing 3 -0.0247915
EPCAM epithelial cell adhesion molecule -0.0246347
GTF2IRD1 GTF2I repeat domain containing 1 -0.0245785
RPLP0 ribosomal protein, large, P0 -0.0245667
TBC1D22A TBC1 domain family, member 22A -0.024348
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0243305
NACA nascent polypeptide-associated complex alpha subunit -0.0240919
RPL8 ribosomal protein L8 -0.0240638
RPL27A ribosomal protein L27a -0.023935
RPL38 ribosomal protein L38 -0.0239052
RPL35A ribosomal protein L35a -0.0238521
HMGA2 high mobility group AT-hook 2 -0.0238362
RPS16 ribosomal protein S16 -0.0237454
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0233249
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0232335
ZRANB3 zinc finger, RAN-binding domain containing 3 -0.0231337
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0231062
RPL36A ribosomal protein L36a -0.0230908
SLC38A1 solute carrier family 38, member 1 -0.0230369
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0229994
PHYKPL 5-phosphohydroxy-L-lysine phospho-lyase -0.0224595
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0221761
RPS10 ribosomal protein S10 -0.0221743
FTH1 ferritin, heavy polypeptide 1 -0.0220023
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0219647
RSL1D1 ribosomal L1 domain containing 1 -0.0218982
SCARB1 scavenger receptor class B, member 1 -0.0218771
RPLP1 ribosomal protein, large, P1 -0.021844
RPL23 ribosomal protein L23 -0.0218365
MRPS6 mitochondrial ribosomal protein S6 -0.0217063
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0216628
ADD1 adducin 1 (alpha) -0.0216612
RPS5 ribosomal protein S5 -0.0216231
RPL13A ribosomal protein L13a -0.0216188
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0215957
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0214662
ANKRD17 ankyrin repeat domain 17 -0.0213914
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0212452
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0212346
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0210328
LRRC23 leucine rich repeat containing 23 -0.0209606
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0209458