Fusidic acid_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.283298
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.213801
ENO1 enolase 1, (alpha) 0.169981
COL6A3 collagen, type VI, alpha 3 0.143384
MT2A metallothionein 2A 0.133083
COL6A2 collagen, type VI, alpha 2 0.127292
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.11819
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.117692
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.115455
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.107458
TRIO trio Rho guanine nucleotide exchange factor 0.106673
CD44 CD44 molecule (Indian blood group) 0.100442
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0987696
ASPH aspartate beta-hydroxylase 0.095873
CXCL8 chemokine (C-X-C motif) ligand 8 0.0808359
MYH9 myosin, heavy chain 9, non-muscle 0.0768477
LDHA lactate dehydrogenase A 0.0744598
COL5A1 collagen, type V, alpha 1 0.0739657
PKM pyruvate kinase, muscle 0.0722974
DST dystonin 0.0678646
ERRFI1 ERBB receptor feedback inhibitor 1 0.0673082
CALR calreticulin 0.0645149
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0641958
SEPTIN9 septin 9 0.06088
HSPA8 heat shock 70kDa protein 8 0.0593797
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0590416
AKAP12 A kinase (PRKA) anchor protein 12 0.0578496
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0569804
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0569112
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0545545
RRM2 ribonucleotide reductase M2 0.0537849
MPRIP myosin phosphatase Rho interacting protein 0.053707
CANX calnexin 0.0535476
FAM13A family with sequence similarity 13, member A 0.0512276
TPT1 tumor protein, translationally-controlled 1 0.0484404
PTPRM protein tyrosine phosphatase, receptor type, M 0.0477822
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0474244
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.047192
RPS3 ribosomal protein S3 0.0470603
CAPRIN2 caprin family member 2 0.0456162
RPL12 ribosomal protein L12 0.0453856
NAP1L1 nucleosome assembly protein 1-like 1 0.0450045
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0442216
PRELID2 PRELI domain containing 2 0.0438008
ZBTB38 zinc finger and BTB domain containing 38 0.0413273
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0401076
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0400141
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0390814
WWOX WW domain containing oxidoreductase 0.0385806
SMAD3 SMAD family member 3 0.0383158
ADM adrenomedullin 0.0379359
PLEC plectin 0.036016
INTS6 integrator complex subunit 6 0.0356964
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0352577
BHLHE40 basic helix-loop-helix family, member e40 0.0350458
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0349375
TPM3 tropomyosin 3 0.0349201
BZW1 basic leucine zipper and W2 domains 1 0.0346058
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0345557
RPS12 ribosomal protein S12 0.0344432
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0343819
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0343107
ACTN1 actinin, alpha 1 0.0342836
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0340273
APP amyloid beta (A4) precursor protein 0.0340173
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0337592
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0333928
ANGPTL4 angiopoietin-like 4 0.0333398
EEF2 eukaryotic translation elongation factor 2 0.0330623
MACF1 microtubule-actin crosslinking factor 1 0.032812
IER3 immediate early response 3 0.0322987
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0321559
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0321148
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0316901
TNS1 tensin 1 0.0316884
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0315144
PDIA4 protein disulfide isomerase family A, member 4 0.0312911
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0310373
NALF1 NALCN channel auxiliary factor 1 0.0309947
RPL35A ribosomal protein L35a 0.0306476
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0303158
TFRC transferrin receptor 0.0301906
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0300886
RPL26 ribosomal protein L26 0.0295987
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0288303
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0287172
SYNE2 spectrin repeat containing, nuclear envelope 2 0.028629
ZNF638 zinc finger protein 638 0.028481
WSB1 WD repeat and SOCS box containing 1 0.028453
JAG1 jagged 1 0.0282284
YBX1 Y box binding protein 1 0.0280291
RPLP1 ribosomal protein, large, P1 0.0279965
DSPP dentin sialophosphoprotein 0.0277824
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0277492
NFE2L1 nuclear factor, erythroid 2-like 1 0.0277472
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0276376
MAP1B microtubule-associated protein 1B 0.0274992
COL7A1 collagen, type VII, alpha 1 0.0272171
RPL37A ribosomal protein L37a 0.0271732
DTNA dystrobrevin, alpha 0.0269637

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.303229
VIM vimentin -0.273876
IGF2 insulin-like growth factor 2 -0.119346
COL6A1 collagen, type VI, alpha 1 -0.0924269
FN1 fibronectin 1 -0.0897029
CDH13 cadherin 13 -0.083763
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0744094
CDCP1 CUB domain containing protein 1 -0.0736251
TENM2 teneurin transmembrane protein 2 -0.0709119
ACTG1 actin gamma 1 -0.0669812
CLMP CXADR-like membrane protein -0.0655555
HMGA2 high mobility group AT-hook 2 -0.0545116
SBF2 SET binding factor 2 -0.0528931
EGR1 early growth response 1 -0.0502995
FNDC3B fibronectin type III domain containing 3B -0.0492656
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0472277
CCND1 cyclin D1 -0.0469109
RTN4 reticulon 4 -0.0455709
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0430831
IGFBP4 insulin-like growth factor binding protein 4 -0.0424375
COL1A1 collagen, type I, alpha 1 -0.0424369
TMEM165 transmembrane protein 165 -0.0416382
ANKRD28 ankyrin repeat domain 28 -0.0408986
TUBB6 tubulin, beta 6 class V -0.040279
GLIS3 GLIS family zinc finger 3 -0.0400899
IGFBP3 insulin-like growth factor binding protein 3 -0.039504
OSMR oncostatin M receptor -0.037064
SETD5 SET domain containing 5 -0.0342178
NF1 neurofibromin 1 -0.0311018
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0304602
TMSB10 thymosin beta 10 -0.029914
WASF2 WAS protein family, member 2 -0.0285144
ZBTB20 zinc finger and BTB domain containing 20 -0.028031
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0278527
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0278141
ANTXR2 anthrax toxin receptor 2 -0.0276672
AGRN agrin -0.0272446
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0271084
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0270105
PCNX4 pecanex 4 -0.0259767
RIN2 Ras and Rab interactor 2 -0.0247185
CUX1 cut-like homeobox 1 -0.0246773
ZMYND8 zinc finger, MYND-type containing 8 -0.0246483
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0245783
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0244549
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0244486
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0241112
MYADM myeloid-associated differentiation marker -0.0235325
S100A10 S100 calcium binding protein A10 -0.0230873
SYMPK symplekin -0.0227193
PRR11 proline rich 11 -0.022368
HM13 histocompatibility (minor) 13 -0.0223058
PPP1R13L protein phosphatase 1, regulatory subunit 13 like -0.0221525
SDK1 sidekick cell adhesion molecule 1 -0.0220198
CD109 CD109 molecule -0.0216897
FMN1 formin 1 -0.0210082
RAI14 retinoic acid induced 14 -0.020735
DSTN destrin (actin depolymerizing factor) -0.0206839
ENO2 enolase 2 (gamma, neuronal) -0.0204032
SREBF2 sterol regulatory element binding transcription factor 2 -0.0199725
CFDP1 craniofacial development protein 1 -0.0198536
BASP1 brain abundant, membrane attached signal protein 1 -0.0196026
RAB5A RAB5A, member RAS oncogene family -0.0195753
MIS18BP1 MIS18 binding protein 1 -0.019564
APOLD1 apolipoprotein L domain containing 1 -0.0195586
ZNF609 zinc finger protein 609 -0.0194138
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0193648
GOSR1 golgi SNAP receptor complex member 1 -0.0192901
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0191113
TAOK1 TAO kinase 1 -0.0187768
BIRC6 baculoviral IAP repeat containing 6 -0.0187406
IL1B interleukin 1, beta -0.0187391
MBD5 methyl-CpG binding domain protein 5 -0.0184452
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0182972
VASP vasodilator-stimulated phosphoprotein -0.0182614
RHOA ras homolog family member A -0.0180699
FAM114A1 family with sequence similarity 114, member A1 -0.017921
PHF20 PHD finger protein 20 -0.0175832
USP34 ubiquitin specific peptidase 34 -0.0174082
DNAAF9 dynein axonemal assembly factor 9 -0.0173459
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0172807
CENPE centromere protein E, 312kDa -0.0172397
INHBA inhibin, beta A -0.0169298
DNER delta/notch-like EGF repeat containing -0.0166706
FBXL2 F-box and leucine-rich repeat protein 2 -0.0165705
PCNX1 pecanex 1 -0.0165449
ANKRD12 ankyrin repeat domain 12 -0.0165094
METTL15 methyltransferase like 15 -0.0164999
HMGA1 high mobility group AT-hook 1 -0.0163686
TPM4 tropomyosin 4 -0.0163542
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0162528
GLG1 golgi glycoprotein 1 -0.0162151
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0161492
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0161478
FAM193A family with sequence similarity 193, member A -0.0161223
RNF149 ring finger protein 149 -0.0160296
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0159806
ATP5F1B ATP synthase F1 subunit beta -0.0159792
HIP1 huntingtin interacting protein 1 -0.0157878
LOC112694756 uncharaterized LOC112694756 -0.0157497