Fusidic acid_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.369447
EZR ezrin 0.143724
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.08745
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0855291
PKM pyruvate kinase, muscle 0.0851102
TJP1 tight junction protein 1 0.081938
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0817246
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0787551
DSPP dentin sialophosphoprotein 0.0785854
KRT20 keratin 20, type I 0.0774403
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0773019
ENO1 enolase 1, (alpha) 0.0766054
PLK2 polo-like kinase 2 0.0765598
SMAD3 SMAD family member 3 0.0744193
FAT1 FAT atypical cadherin 1 0.0737172
DST dystonin 0.0726833
SPTBN1 spectrin, beta, non-erythrocytic 1 0.068779
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.068683
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0666709
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0638875
RPS3 ribosomal protein S3 0.0631414
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0627957
AFF1 AF4/FMR2 family, member 1 0.0620405
MACF1 microtubule-actin crosslinking factor 1 0.059623
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0594226
CALR calreticulin 0.0575802
MYH9 myosin, heavy chain 9, non-muscle 0.055331
MYO5B myosin VB 0.0540852
NTN4 netrin 4 0.0533842
EXT1 exostosin glycosyltransferase 1 0.0533253
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0519508
RND3 Rho family GTPase 3 0.0518454
TMC5 transmembrane channel-like 5 0.0513302
JUN jun proto-oncogene 0.0509668
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0505065
PRKN parkin RBR E3 ubiquitin protein ligase 0.0504622
RHPN2 rhophilin, Rho GTPase binding protein 2 0.0503669
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0500577
EMP1 epithelial membrane protein 1 0.0499811
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0491111
SRRM2 serine/arginine repetitive matrix 2 0.0490012
CTBP2 C-terminal binding protein 2 0.0475761
PELI1 pellino E3 ubiquitin protein ligase 1 0.0471417
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0451118
KRT18 keratin 18, type I 0.0448181
NCEH1 neutral cholesterol ester hydrolase 1 0.0448027
PDZD8 PDZ domain containing 8 0.0445979
ANXA11 annexin A11 0.0445265
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0428153
MYO6 myosin VI 0.0427197
TRAPPC9 trafficking protein particle complex 9 0.042485
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0422749
ERRFI1 ERBB receptor feedback inhibitor 1 0.0414478
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0407204
RPL4 ribosomal protein L4 0.0406468
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0400267
ETV6 ets variant 6 0.0397297
ARHGAP42 Rho GTPase activating protein 42 0.0387351
ITPKC inositol-trisphosphate 3-kinase C 0.0386447
ESYT2 extended synaptotagmin-like protein 2 0.0386035
CD164 CD164 molecule, sialomucin 0.0381147
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0372689
RPS12 ribosomal protein S12 0.0369758
RPL41 ribosomal protein L41 0.0362794
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0361982
UTRN utrophin 0.0358315
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0357418
BPTF bromodomain PHD finger transcription factor 0.0354337
HYOU1 hypoxia up-regulated 1 0.0354165
NEBL nebulette 0.0353966
NFE2L1 nuclear factor, erythroid 2-like 1 0.035013
TPM3 tropomyosin 3 0.0348567
AFDN afadin, adherens junction formation factor 0.0344564
EPS8L1 EPS8-like 1 0.0340307
EXPH5 exophilin 5 0.0339024
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.0334045
TMEM45B transmembrane protein 45B 0.0332843
LDHA lactate dehydrogenase A 0.0329017
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0328301
EIF4B eukaryotic translation initiation factor 4B 0.0327924
SEPTIN9 septin 9 0.0327319
DPP4 dipeptidyl-peptidase 4 0.0326194
OCLN occludin 0.0322273
PDIA4 protein disulfide isomerase family A, member 4 0.0320573
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0319862
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0315743
PPL periplakin 0.0314313
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0313667
STK24 serine/threonine kinase 24 0.0313374
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0312862
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.031202
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0311665
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 0.0311526
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0309896
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0308379
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0308055
EEF2 eukaryotic translation elongation factor 2 0.030764
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0307567
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0307549
POF1B premature ovarian failure, 1B 0.0305266

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.105104
NDRG1 N-myc downstream regulated 1 -0.101891
TXNRD1 thioredoxin reductase 1 -0.100695
SLC45A4 solute carrier family 45, member 4 -0.0903685
LYZ lysozyme -0.0634849
ANXA2 annexin A2 -0.0632859
RAB7A RAB7A, member RAS oncogene family -0.0624832
GMDS GDP-mannose 4,6-dehydratase -0.0605987
TMSB10 thymosin beta 10 -0.0604723
PDIA3 protein disulfide isomerase family A, member 3 -0.0578998
VCL vinculin -0.0570471
EGR1 early growth response 1 -0.0553061
ACTN4 actinin, alpha 4 -0.0545242
GARS1 glycyl-tRNA synthetase 1 -0.0542694
HM13 histocompatibility (minor) 13 -0.0537494
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0512104
PTMA prothymosin, alpha -0.049224
ACTG1 actin gamma 1 -0.0470001
DIAPH2 diaphanous-related formin 2 -0.0467697
WASF2 WAS protein family, member 2 -0.0459825
GCLC glutamate-cysteine ligase, catalytic subunit -0.0454146
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0452551
HMGA1 high mobility group AT-hook 1 -0.0444116
ARHGAP26 Rho GTPase activating protein 26 -0.0417845
RPL21 ribosomal protein L21 -0.0415402
RBM39 RNA binding motif protein 39 -0.0398658
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0379381
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0378062
INTS6 integrator complex subunit 6 -0.0374076
NF1 neurofibromin 1 -0.0370741
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0358994
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0358803
BIRC6 baculoviral IAP repeat containing 6 -0.0350932
GNAS GNAS complex locus -0.033835
COG5 component of oligomeric golgi complex 5 -0.0338305
FOSL1 FOS-like antigen 1 -0.0321404
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0321199
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0316404
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0315707
LAMA4 laminin, alpha 4 -0.0307173
RTN4 reticulon 4 -0.0306891
FRY furry homolog (Drosophila) -0.030462
AGR2 anterior gradient 2 -0.0303364
DSTN destrin (actin depolymerizing factor) -0.0301236
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.029956
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0297221
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0285205
IARS1 isoleucyl-tRNA synthetase 1 -0.0276465
ZFAND3 zinc finger, AN1-type domain 3 -0.0271486
ANKRD17 ankyrin repeat domain 17 -0.0269084
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.026864
ATP5F1B ATP synthase F1 subunit beta -0.0268056
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0265617
PATJ PATJ crumbs cell polarity complex component -0.0264745
ANKRD10 ankyrin repeat domain 10 -0.0263823
INSIG1 insulin induced gene 1 -0.0261605
TRPS1 trichorhinophalangeal syndrome I -0.0260334
MBD5 methyl-CpG binding domain protein 5 -0.0259821
RPS24 ribosomal protein S24 -0.0259286
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0258935
ZNF207 zinc finger protein 207 -0.0254957
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0254777
IL6ST interleukin 6 signal transducer -0.0252911
ADIPOR2 adiponectin receptor 2 -0.0252857
FOXO3 forkhead box O3 -0.0252453
GPX2 glutathione peroxidase 2 -0.0250975
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type -0.0250862
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) -0.0250515
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0248331
KLHL24 kelch-like family member 24 -0.0245365
UBE2B ubiquitin-conjugating enzyme E2B -0.0244061
SBF2 SET binding factor 2 -0.024399
CHKA choline kinase alpha -0.0243943
RPS23 ribosomal protein S23 -0.0241736
RTN3 reticulon 3 -0.0241571
TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa -0.0240187
RPL28 ribosomal protein L28 -0.0239437
DDIT3 DNA-damage-inducible transcript 3 -0.0238448
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.023605
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0233971
SREBF2 sterol regulatory element binding transcription factor 2 -0.0233264
RPS25 ribosomal protein S25 -0.023322
FNIP1 folliculin interacting protein 1 -0.0230704
TRA2A transformer 2 alpha homolog (Drosophila) -0.0230336
LGALS4 lectin, galactoside-binding, soluble, 4 -0.0229836
KRT8 keratin 8, type II -0.0229136
NT5C2 5'-nucleotidase, cytosolic II -0.0228154
PNISR PNN-interacting serine/arginine-rich protein -0.0225971
ADNP activity-dependent neuroprotector homeobox -0.0225021
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0224843
ARF4 ADP-ribosylation factor 4 -0.0223722
RAB1A RAB1A, member RAS oncogene family -0.0223668
LNX2 ligand of numb-protein X 2 -0.0222678
SERTAD2 SERTA domain containing 2 -0.0220191
SQSTM1 sequestosome 1 -0.0219924
SGPP2 sphingosine-1-phosphate phosphatase 2 -0.0219621
RAP1B RAP1B, member of RAS oncogene family -0.0219584
NPSR1 neuropeptide S receptor 1 -0.0218902
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -0.0217619
CAPZB capping protein (actin filament) muscle Z-line, beta -0.0216535