Fusidic acid_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.245146
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.171353
IGFBP1 insulin-like growth factor binding protein 1 0.156242
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.114012
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.111603
SAMD4A sterile alpha motif domain containing 4A 0.10732
ATXN1 ataxin 1 0.103142
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0965897
SVIL supervillin 0.0953813
DSPP dentin sialophosphoprotein 0.0767683
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.076111
C3 complement component 3 0.0744374
PDLIM5 PDZ and LIM domain 5 0.0744231
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.069772
ASPH aspartate beta-hydroxylase 0.0617896
MACF1 microtubule-actin crosslinking factor 1 0.0592294
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0560376
EXT1 exostosin glycosyltransferase 1 0.0554321
FAT1 FAT atypical cadherin 1 0.0550886
ERRFI1 ERBB receptor feedback inhibitor 1 0.0536681
SMAD3 SMAD family member 3 0.0533288
MYH9 myosin, heavy chain 9, non-muscle 0.0523864
KYNU kynureninase 0.0518499
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0499312
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0496723
FAM107B family with sequence similarity 107, member B 0.0491884
INTS6 integrator complex subunit 6 0.0469945
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0463339
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0439838
FOXP1 forkhead box P1 0.0439769
AFDN afadin, adherens junction formation factor 0.0430613
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0406945
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0403347
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0400032
MT2A metallothionein 2A 0.0393754
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0380702
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0375336
DST dystonin 0.0374678
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0369607
TLE4 transducin-like enhancer of split 4 0.0364947
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.0357854
HPCAL1 hippocalcin-like 1 0.0350956
NRIP1 nuclear receptor interacting protein 1 0.0345549
EEF2 eukaryotic translation elongation factor 2 0.0333489
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0329789
RASA2 RAS p21 protein activator 2 0.0329033
GRB10 growth factor receptor-bound protein 10 0.0326314
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0322465
JAG1 jagged 1 0.0313694
BCL2L1 BCL2-like 1 0.0312287
USP34 ubiquitin specific peptidase 34 0.0308692
ADARB1 adenosine deaminase, RNA-specific, B1 0.0306114
ITGB5 integrin, beta 5 0.0305054
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.0303794
LIMS1 LIM and senescent cell antigen-like domains 1 0.0303284
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0303254
FERMT2 fermitin family member 2 0.0299104
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0284287
MCL1 myeloid cell leukemia 1 0.0283545
MYO1B myosin IB 0.0282766
DIAPH1 diaphanous-related formin 1 0.0282599
VEGFA vascular endothelial growth factor A 0.0278782
RPS12 ribosomal protein S12 0.027769
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0277137
PAWR PRKC, apoptosis, WT1, regulator 0.0274858
IQSEC1 IQ motif and Sec7 domain 1 0.0274175
PICALM phosphatidylinositol binding clathrin assembly protein 0.0272814
JAK1 Janus kinase 1 0.0271158
RPL3 ribosomal protein L3 0.026947
SERTAD2 SERTA domain containing 2 0.0268194
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0267079
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.026219
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0259014
LPP LIM domain containing preferred translocation partner in lipoma 0.0255884
MYO1E myosin IE 0.0253546
CORO1C coronin, actin binding protein, 1C 0.0252103
POTEF POTE ankyrin domain family, member F 0.0250977
ITCH itchy E3 ubiquitin protein ligase 0.0248806
SORBS1 sorbin and SH3 domain containing 1 0.0244915
USP47 ubiquitin specific peptidase 47 0.0243258
VMP1 vacuole membrane protein 1 0.0242013
KIAA1217 KIAA1217 0.0241492
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0239279
HOMER1 homer scaffolding protein 1 0.0238137
SEPTIN9 septin 9 0.0238132
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0237667
NAP1L1 nucleosome assembly protein 1-like 1 0.0237443
EIF4B eukaryotic translation initiation factor 4B 0.0236948
HDAC4 histone deacetylase 4 0.0234794
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0233035
ZNF638 zinc finger protein 638 0.0232203
TNS1 tensin 1 0.0231657
WWC2 WW and C2 domain containing 2 0.0230421
ZEB1 zinc finger E-box binding homeobox 1 0.0227569
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0225463
PPARD peroxisome proliferator-activated receptor delta 0.0224929
HSPA8 heat shock 70kDa protein 8 0.0224922
DSCAM Down syndrome cell adhesion molecule 0.0222969
KIF21A kinesin family member 21A 0.0221905
OSBPL8 oxysterol binding protein-like 8 0.022179

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.32526
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.119839
GPC3 glypican 3 -0.0998283
CP ceruloplasmin (ferroxidase) -0.0917578
APOA2 apolipoprotein A-II -0.0909733
AKAP12 A kinase (PRKA) anchor protein 12 -0.0906422
EML4 echinoderm microtubule associated protein like 4 -0.0797821
TM4SF1 transmembrane 4 L six family member 1 -0.0768258
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0693852
EHBP1 EH domain binding protein 1 -0.0680495
TRIM26 tripartite motif containing 26 -0.0663814
ELL2 elongation factor, RNA polymerase II, 2 -0.0660236
ZMYND8 zinc finger, MYND-type containing 8 -0.0658149
TPT1 tumor protein, translationally-controlled 1 -0.061715
DLC1 DLC1 Rho GTPase activating protein -0.0598301
FBF1 Fas (TNFRSF6) binding factor 1 -0.0585481
TMEM123 transmembrane protein 123 -0.0584158
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0531253
MAML2 mastermind-like 2 (Drosophila) -0.0526481
A2M alpha-2-macroglobulin -0.05054
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0491735
LYZ lysozyme -0.0471373
PTPRM protein tyrosine phosphatase, receptor type, M -0.0436095
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0434054
PEG3 paternally expressed 3 -0.0420904
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.041251
SLC38A2 solute carrier family 38, member 2 -0.0405046
LMCD1 LIM and cysteine-rich domains 1 -0.0392092
FTL ferritin, light polypeptide -0.0381161
RBM39 RNA binding motif protein 39 -0.0371776
GCC2 GRIP and coiled-coil domain containing 2 -0.0364011
AMBP alpha-1-microglobulin/bikunin precursor -0.0362917
SLC38A1 solute carrier family 38, member 1 -0.0350465
NPR2 natriuretic peptide receptor 2 -0.0350096
APOE apolipoprotein E -0.0339885
TPM4 tropomyosin 4 -0.0325026
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.031256
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 -0.0309271
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0305224
NPAS2 neuronal PAS domain protein 2 -0.0299743
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0293795
PDGFB platelet-derived growth factor beta polypeptide -0.0283535
SORL1 sortilin-related receptor, L(DLR class) A repeats containing -0.0283079
PERP PERP, TP53 apoptosis effector -0.0282256
KPNB1 karyopherin (importin) beta 1 -0.027443
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0273577
PATJ PATJ crumbs cell polarity complex component -0.0268625
GNAS GNAS complex locus -0.0267789
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0264968
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0264374
GDF15 growth differentiation factor 15 -0.0264277
ITGA1 integrin, alpha 1 -0.026158
DOK6 docking protein 6 -0.0259016
PDIA3 protein disulfide isomerase family A, member 3 -0.0251686
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0245224
EGR1 early growth response 1 -0.0243516
ATP10A ATPase, class V, type 10A -0.023846
B2M beta-2-microglobulin -0.0235071
IER3 immediate early response 3 -0.0234694
GK glycerol kinase -0.0230972
APOH apolipoprotein H (beta-2-glycoprotein I) -0.0230566
RUNX1 runt-related transcription factor 1 -0.0229687
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.022935
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0226251
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0226021
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0224365
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0224291
RPS24 ribosomal protein S24 -0.022399
DNAAF9 dynein axonemal assembly factor 9 -0.0213262
FERMT1 fermitin family member 1 -0.0213088
ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) -0.0212612
RSL1D1 ribosomal L1 domain containing 1 -0.0211879
CALD1 caldesmon 1 -0.0210402
MBNL3 muscleblind-like splicing regulator 3 -0.021024
EPCAM epithelial cell adhesion molecule -0.0209375
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0206192
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0205687
MX2 MX dynamin-like GTPase 2 -0.0205085
PLIN2 perilipin 2 -0.0205027
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0204069
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.019929
SCN1A sodium channel, voltage gated, type I alpha subunit -0.0199131
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0198549
JUN jun proto-oncogene -0.0198425
LPGAT1 lysophosphatidylglycerol acyltransferase 1 -0.0197308
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 -0.019671
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0195849
NPEPPS aminopeptidase puromycin sensitive -0.0193867
PHF21A PHD finger protein 21A -0.0193756
LDLRAD4 low density lipoprotein receptor class A domain containing 4 -0.0192215
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0191497
PTPRF protein tyrosine phosphatase, receptor type, F -0.0190946
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0190895
WDR45B WD repeat domain 45B -0.0190568
JMJD1C jumonji domain containing 1C -0.0190298
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.018789
ZBTB20 zinc finger and BTB domain containing 20 -0.0187635
SCAF11 SR-related CTD-associated factor 11 -0.0187583
LAMA4 laminin, alpha 4 -0.018652
CRY1 cryptochrome circadian clock 1 -0.018341