Fusidic acid_J82 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in J82 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_J82 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.439622
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.180971
MT2A metallothionein 2A 0.137847
ENO1 enolase 1, (alpha) 0.129971
ZNF841 zinc finger protein 841 0.114863
MYH9 myosin, heavy chain 9, non-muscle 0.105519
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0969399
DST dystonin 0.0746621
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0703491
PODXL podocalyxin-like 0.0624094
LDHA lactate dehydrogenase A 0.056911
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0559369
MT1X metallothionein 1X 0.0523607
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0514198
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.05027
TPM3 tropomyosin 3 0.0487161
PKM pyruvate kinase, muscle 0.044492
AKAP12 A kinase (PRKA) anchor protein 12 0.04407
CD44 CD44 molecule (Indian blood group) 0.0428146
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0402752
ASPH aspartate beta-hydroxylase 0.0396898
RPS3 ribosomal protein S3 0.0396076
CALR calreticulin 0.0378712
ERBIN erbb2 interacting protein 0.036185
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0359847
CENPF centromere protein F, 350/400kDa 0.0355475
HEG1 heart development protein with EGF-like domains 1 0.0341261
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0330889
BZW1 basic leucine zipper and W2 domains 1 0.0324109
ADM adrenomedullin 0.0315595
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0306929
SRRM2 serine/arginine repetitive matrix 2 0.0304973
PALM2AKAP2 PALM2 and AKAP2 fusion 0.030175
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.0301425
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0295879
BCAR3 breast cancer anti-estrogen resistance 3 0.0292988
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0287114
PDLIM5 PDZ and LIM domain 5 0.0285497
HMGB2 high mobility group box 2 0.0284515
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0283639
MPRIP myosin phosphatase Rho interacting protein 0.0275599
TPR translocated promoter region, nuclear basket protein 0.0271699
HSPA8 heat shock 70kDa protein 8 0.0268211
PICALM phosphatidylinositol binding clathrin assembly protein 0.0265146
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0263846
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0262309
SMC1A structural maintenance of chromosomes 1A 0.0260634
EZR ezrin 0.0258998
APP amyloid beta (A4) precursor protein 0.0248118
ANGPTL4 angiopoietin-like 4 0.0241634
NFE2L1 nuclear factor, erythroid 2-like 1 0.0240906
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.023896
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0238884
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0233525
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0228908
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0228828
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0225002
ACTN1 actinin, alpha 1 0.0224826
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0224
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0223495
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0221312
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0220802
SET SET nuclear proto-oncogene 0.0220225
SEPTIN9 septin 9 0.0219916
RPS12 ribosomal protein S12 0.0219658
TOP2A topoisomerase (DNA) II alpha 170kDa 0.021925
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0217734
CD59 CD59 molecule, complement regulatory protein 0.0217589
RPS2 ribosomal protein S2 0.0215441
BHLHE40 basic helix-loop-helix family, member e40 0.0212741
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0211685
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0211294
MSN moesin 0.0210928
ATP13A3 ATPase type 13A3 0.0206571
KTN1 kinectin 1 (kinesin receptor) 0.0206321
LMO7 LIM domain 7 0.0203029
TXNRD1 thioredoxin reductase 1 0.0202582
POTEF POTE ankyrin domain family, member F 0.020166
EFNA5 ephrin-A5 0.0199524
MCL1 myeloid cell leukemia 1 0.0195462
RPL41 ribosomal protein L41 0.0190753
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0190516
RPL26 ribosomal protein L26 0.0189742
SMAD3 SMAD family member 3 0.0185734
TMSB4X thymosin beta 4, X-linked 0.0184271
MYO10 myosin X 0.0182267
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0181948
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0181809
ATAD2 ATPase family, AAA domain containing 2 0.018021
JUN jun proto-oncogene 0.0179294
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0178646
USP9X ubiquitin specific peptidase 9, X-linked 0.0177339
LIMA1 LIM domain and actin binding 1 0.0176878
ANKRD36 ankyrin repeat domain 36 0.0176639
SH3RF1 SH3 domain containing ring finger 1 0.0175611
INTS6 integrator complex subunit 6 0.0175557
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 0.0175479
YBX1 Y box binding protein 1 0.017415
ANXA2 annexin A2 0.017405
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0172085

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.224853
HLA-B major histocompatibility complex, class I, B -0.209573
FN1 fibronectin 1 -0.193964
IGFBP3 insulin-like growth factor binding protein 3 -0.148015
NALF1 NALCN channel auxiliary factor 1 -0.125452
ABI3BP ABI family, member 3 (NESH) binding protein -0.111795
FTL ferritin, light polypeptide -0.106003
DLG1 discs, large homolog 1 (Drosophila) -0.0899095
PHACTR1 phosphatase and actin regulator 1 -0.0796446
DEK DEK proto-oncogene -0.073578
GLIS3 GLIS family zinc finger 3 -0.0537179
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0534765
SLC12A8 solute carrier family 12, member 8 -0.0497307
PTMA prothymosin, alpha -0.0480733
PDIA3 protein disulfide isomerase family A, member 3 -0.0467484
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0425301
ZXDC ZXD family zinc finger C -0.0413971
VIM vimentin -0.0413753
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0411278
ACTG1 actin gamma 1 -0.0398925
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0388169
POSTN periostin, osteoblast specific factor -0.0385212
CTSD cathepsin D -0.0384277
UGCG UDP-glucose ceramide glucosyltransferase -0.0383248
CCBE1 collagen and calcium binding EGF domains 1 -0.0375804
PLCB4 phospholipase C, beta 4 -0.0367966
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0366223
RPS6 ribosomal protein S6 -0.0351735
RHOBTB3 Rho-related BTB domain containing 3 -0.0349225
NDRG1 N-myc downstream regulated 1 -0.0348636
IGFBP5 insulin-like growth factor binding protein 5 -0.0331564
CCND1 cyclin D1 -0.0328155
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0327222
RPLP2 ribosomal protein, large, P2 -0.0326429
S100A10 S100 calcium binding protein A10 -0.0325764
ATP5F1B ATP synthase F1 subunit beta -0.0314489
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0310367
ARF4 ADP-ribosylation factor 4 -0.0306561
KRT7 keratin 7, type II -0.0302823
SULF1 sulfatase 1 -0.0294501
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0293394
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0290544
TMSB10 thymosin beta 10 -0.0288485
IFITM3 interferon induced transmembrane protein 3 -0.0286267
STAU1 staufen double-stranded RNA binding protein 1 -0.0277535
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0274351
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0268356
SAMD12 sterile alpha motif domain containing 12 -0.0265966
COPB1 coatomer protein complex, subunit beta 1 -0.0264989
ZBTB20 zinc finger and BTB domain containing 20 -0.0264821
RPS23 ribosomal protein S23 -0.0260903
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 -0.0260538
OSMR oncostatin M receptor -0.0256665
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0256228
MMP12 matrix metallopeptidase 12 -0.0254073
DPYD dihydropyrimidine dehydrogenase -0.0252549
MAP1B microtubule-associated protein 1B -0.0250816
AHNAK AHNAK nucleoprotein -0.0249602
PTK2 protein tyrosine kinase 2 -0.0248411
ZNF804A zinc finger protein 804A -0.024819
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0247483
FOXP1 forkhead box P1 -0.0247364
SBF2 SET binding factor 2 -0.0246349
RPL28 ribosomal protein L28 -0.0244348
LOC112694756 uncharaterized LOC112694756 -0.0243377
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0242789
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0242263
PFN1 profilin 1 -0.0239175
RBM39 RNA binding motif protein 39 -0.0238862
ZMYND8 zinc finger, MYND-type containing 8 -0.0237122
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0230998
DYNLRB1 dynein, light chain, roadblock-type 1 -0.0229803
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0227823
ZNF609 zinc finger protein 609 -0.022702
MTDH metadherin -0.0222773
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0220789
EXT1 exostosin glycosyltransferase 1 -0.0220654
MON2 MON2 homolog (S. cerevisiae) -0.0218841
RPL7A ribosomal protein L7a -0.0218696
NAMPT nicotinamide phosphoribosyltransferase -0.0216798
RPL21 ribosomal protein L21 -0.0216537
TMEM178B transmembrane protein 178B -0.0215974
IFI6 interferon, alpha-inducible protein 6 -0.0214787
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.021437
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0213346
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0211075
ADNP activity-dependent neuroprotector homeobox -0.0210962
LY6E lymphocyte antigen 6 complex, locus E -0.0210355
RPLP1 ribosomal protein, large, P1 -0.0210034
IARS1 isoleucyl-tRNA synthetase 1 -0.0210004
GNAS GNAS complex locus -0.0209376
HLA-E major histocompatibility complex, class I, E -0.0206665
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0203729
EGR1 early growth response 1 -0.0200919
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.0200059
CCDC80 coiled-coil domain containing 80 -0.0199277
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0198627
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0198043
TUBB4B tubulin, beta 4B class IVb -0.019482
TRIM56 tripartite motif containing 56 -0.0194322