Fusidic acid_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SLTM SAFB-like, transcription modulator 0.117275
GRAMD1B GRAM domain containing 1B 0.102348
ELL2 elongation factor, RNA polymerase II, 2 0.0886411
CEMIP cell migration inducing protein, hyaluronan binding 0.0704905
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0674821
MCL1 myeloid cell leukemia 1 0.0636033
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.06058
PM20D1 peptidase M20 domain containing 1 0.0598476
PDE4D phosphodiesterase 4D, cAMP-specific 0.0561521
AGO2 argonaute RISC catalytic component 2 0.0559263
SPAG9 sperm associated antigen 9 0.0545076
DSCAM Down syndrome cell adhesion molecule 0.0525897
MT2A metallothionein 2A 0.0477109
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0474687
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0467295
TOP1 topoisomerase (DNA) I 0.0453932
INTS6 integrator complex subunit 6 0.0451541
CXCL8 chemokine (C-X-C motif) ligand 8 0.0442736
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0429978
ENO1 enolase 1, (alpha) 0.0421206
TBC1D22A TBC1 domain family, member 22A 0.0404584
HOMER1 homer scaffolding protein 1 0.0397443
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0389858
MYH9 myosin, heavy chain 9, non-muscle 0.0380312
MAP7 microtubule-associated protein 7 0.0374429
NAMPT nicotinamide phosphoribosyltransferase 0.0368661
BMP6 bone morphogenetic protein 6 0.0366155
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0362662
RUNX1 runt-related transcription factor 1 0.0351907
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0348224
RPS3 ribosomal protein S3 0.0339872
VMP1 vacuole membrane protein 1 0.0339627
NABP1 nucleic acid binding protein 1 0.0338118
LAMA4 laminin, alpha 4 0.0333352
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0325985
HSPA8 heat shock 70kDa protein 8 0.032423
MCTP1 multiple C2 domains, transmembrane 1 0.031558
NSUN6 NOP2/Sun domain family, member 6 0.0295653
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0295568
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0288723
AREG amphiregulin 0.0280147
BCAR3 breast cancer anti-estrogen resistance 3 0.027864
SIK3 SIK family kinase 3 0.027737
SAMD4A sterile alpha motif domain containing 4A 0.0277211
GLS2 glutaminase 2 (liver, mitochondrial) 0.027512
DOCK5 dedicator of cytokinesis 5 0.0274192
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0271571
DTNA dystrobrevin, alpha 0.0266325
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0262583
FNDC3A fibronectin type III domain containing 3A 0.0259194
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0255897
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0254916
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0254719
ZSWIM6 zinc finger, SWIM-type containing 6 0.0253198
PKM pyruvate kinase, muscle 0.0251453
CES1 carboxylesterase 1 0.0250738
JMJD1C jumonji domain containing 1C 0.0249651
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0244422
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0241034
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0237898
NAP1L1 nucleosome assembly protein 1-like 1 0.0237066
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0234706
EXT1 exostosin glycosyltransferase 1 0.0233257
SMOC1 SPARC related modular calcium binding 1 0.0226452
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0223233
GPATCH2L G patch domain containing 2-like 0.0220321
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 0.0218986
KYNU kynureninase 0.0218754
MACF1 microtubule-actin crosslinking factor 1 0.0216852
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0214945
CSNK1A1 casein kinase 1, alpha 1 0.0212019
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0211061
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0210071
ERRFI1 ERBB receptor feedback inhibitor 1 0.0209511
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0205121
SMYD3 SET and MYND domain containing 3 0.0203565
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0203141
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0199671
KIAA1217 KIAA1217 0.0199214
USP9X ubiquitin specific peptidase 9, X-linked 0.0198089
SFPQ splicing factor proline/glutamine-rich 0.0195977
PYGL phosphorylase, glycogen, liver 0.0193942
HYOU1 hypoxia up-regulated 1 0.019254
RPL41 ribosomal protein L41 0.0192098
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0191535
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0191409
SMAD3 SMAD family member 3 0.0190921
LRP12 low density lipoprotein receptor-related protein 12 0.0189598
PRELID2 PRELI domain containing 2 0.0186796
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0185973
RPL4 ribosomal protein L4 0.0184954
RNF213 ring finger protein 213 0.0184454
VCL vinculin 0.0181571
RPS12 ribosomal protein S12 0.0181551
RAD51B RAD51 paralog B 0.0181291
PDLIM5 PDZ and LIM domain 5 0.0180564
MYO1E myosin IE 0.0180423
DST dystonin 0.018034
WWOX WW domain containing oxidoreductase 0.018018
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.017892

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.18413
EGFR epidermal growth factor receptor -0.134926
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.114916
NDRG1 N-myc downstream regulated 1 -0.100164
CAV1 caveolin 1, caveolae protein, 22kDa -0.0982543
TMSB10 thymosin beta 10 -0.0916159
ACTG1 actin gamma 1 -0.0819037
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.079322
PTPRM protein tyrosine phosphatase, receptor type, M -0.0675209
ZMYND8 zinc finger, MYND-type containing 8 -0.0646696
S100A10 S100 calcium binding protein A10 -0.0603544
ASPH aspartate beta-hydroxylase -0.0568623
KRT7 keratin 7, type II -0.0492798
PATJ PATJ crumbs cell polarity complex component -0.0457592
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0446723
IGFBP3 insulin-like growth factor binding protein 3 -0.0446608
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0427927
CCND1 cyclin D1 -0.0414908
TXNRD1 thioredoxin reductase 1 -0.0377798
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0374178
RAB27B RAB27B, member RAS oncogene family -0.0368268
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0366492
KRT18 keratin 18, type I -0.0362122
AHNAK AHNAK nucleoprotein -0.0358425
ANXA2 annexin A2 -0.0355513
LAMC2 laminin, gamma 2 -0.0341006
EGR1 early growth response 1 -0.0337022
TMEM165 transmembrane protein 165 -0.0336419
AKR1C1 aldo-keto reductase family 1, member C1 -0.0335906
CST3 cystatin C -0.0333146
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0333043
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0330739
CAV2 caveolin 2 -0.0326971
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0314962
PARD3 par-3 family cell polarity regulator -0.0309937
TNS3 tensin 3 -0.0305425
RIN2 Ras and Rab interactor 2 -0.0299727
PTMA prothymosin, alpha -0.0292163
HDLBP high density lipoprotein binding protein -0.0290715
GCLC glutamate-cysteine ligase, catalytic subunit -0.0288992
S100A6 S100 calcium binding protein A6 -0.0286287
WASF2 WAS protein family, member 2 -0.0278786
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0268427
HLA-B major histocompatibility complex, class I, B -0.0265132
SCEL sciellin -0.0259237
LMO7 LIM domain 7 -0.0255748
LIMCH1 LIM and calponin homology domains 1 -0.0255582
IGFBP5 insulin-like growth factor binding protein 5 -0.0248598
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0243693
SLC38A1 solute carrier family 38, member 1 -0.0243506
MGAT4C MGAT4 family, member C -0.0241626
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0241403
BIRC6 baculoviral IAP repeat containing 6 -0.0236486
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0232499
TPM4 tropomyosin 4 -0.0231386
GNAS GNAS complex locus -0.0231186
TRIM56 tripartite motif containing 56 -0.0231028
BRWD1 bromodomain and WD repeat domain containing 1 -0.0229042
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0227718
KRT8 keratin 8, type II -0.0225825
PERP PERP, TP53 apoptosis effector -0.0223603
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0222363
FLNB filamin B, beta -0.0219535
KRT19 keratin 19, type I -0.0216128
DSG2 desmoglein 2 -0.021576
HMGA1 high mobility group AT-hook 1 -0.0213273
TMOD3 tropomodulin 3 (ubiquitous) -0.0210359
SBF2 SET binding factor 2 -0.0207739
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.020522
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0199907
AGR2 anterior gradient 2 -0.0199753
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0198211
HM13 histocompatibility (minor) 13 -0.0196785
ARHGAP32 Rho GTPase activating protein 32 -0.0189801
SLMAP sarcolemma associated protein -0.0189714
SPTSSA serine palmitoyltransferase, small subunit A -0.0187848
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.0187473
BAZ2A bromodomain adjacent to zinc finger domain, 2A -0.018615
CUX1 cut-like homeobox 1 -0.0185249
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0183201
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0182873
RIOK3 RIO kinase 3 -0.0181151
KMT2A lysine (K)-specific methyltransferase 2A -0.0179782
KDM2A lysine (K)-specific demethylase 2A -0.0178704
TPD52 tumor protein D52 -0.0177386
CP ceruloplasmin (ferroxidase) -0.017634
AHNAK2 AHNAK nucleoprotein 2 -0.0175688
BMP7 bone morphogenetic protein 7 -0.0173231
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0172609
TAOK3 TAO kinase 3 -0.0172576
SREBF2 sterol regulatory element binding transcription factor 2 -0.0171607
CD99 CD99 molecule -0.0171231
SPIRE1 spire-type actin nucleation factor 1 -0.017
ADGRF1 adhesion G protein-coupled receptor F1 -0.0168985
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0168183
PDIA3 protein disulfide isomerase family A, member 3 -0.0167255
MAML2 mastermind-like 2 (Drosophila) -0.016721
LDHA lactate dehydrogenase A -0.0163494
KPNB1 karyopherin (importin) beta 1 -0.0161112
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0156874