Fusidic acid_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.13865
PDE4D phosphodiesterase 4D, cAMP-specific 0.125765
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.121966
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.110258
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0959383
FMNL2 formin-like 2 0.0851936
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0844955
TRIO trio Rho guanine nucleotide exchange factor 0.0793581
SMOC1 SPARC related modular calcium binding 1 0.0768162
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0761245
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0751551
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0742125
SAMD4A sterile alpha motif domain containing 4A 0.0695182
FAM107B family with sequence similarity 107, member B 0.0639042
APP amyloid beta (A4) precursor protein 0.0632961
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0631751
MACF1 microtubule-actin crosslinking factor 1 0.0627408
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0602902
DST dystonin 0.0597673
ZFAND3 zinc finger, AN1-type domain 3 0.0587014
CALR calreticulin 0.0572391
PKM pyruvate kinase, muscle 0.0565428
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0557181
BASP1 brain abundant, membrane attached signal protein 1 0.0545224
WAC WW domain containing adaptor with coiled-coil 0.0525126
AKAP12 A kinase (PRKA) anchor protein 12 0.0512336
WWOX WW domain containing oxidoreductase 0.0505452
DOCK4 dedicator of cytokinesis 4 0.0498477
DOCK5 dedicator of cytokinesis 5 0.0492807
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0492394
MYOF myoferlin 0.0492311
SPTBN1 spectrin, beta, non-erythrocytic 1 0.049229
ASPH aspartate beta-hydroxylase 0.0481283
PM20D1 peptidase M20 domain containing 1 0.0476239
KTN1 kinectin 1 (kinesin receptor) 0.0473873
MYH9 myosin, heavy chain 9, non-muscle 0.0459822
TPM3 tropomyosin 3 0.0459074
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0452526
ENO1 enolase 1, (alpha) 0.0450378
KDM3A lysine (K)-specific demethylase 3A 0.0450029
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0437004
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0431095
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0429622
NAP1L1 nucleosome assembly protein 1-like 1 0.0429359
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0427948
LPP LIM domain containing preferred translocation partner in lipoma 0.0426065
FNDC3B fibronectin type III domain containing 3B 0.0425301
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0423863
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0422174
CMIP c-Maf inducing protein 0.0420117
EXT1 exostosin glycosyltransferase 1 0.0420055
FLNB filamin B, beta 0.0419379
UBAP2L ubiquitin associated protein 2-like 0.0418696
FUS FUS RNA binding protein 0.0405326
ACTN1 actinin, alpha 1 0.0405076
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0399791
SFPQ splicing factor proline/glutamine-rich 0.0396615
UBASH3B ubiquitin associated and SH3 domain containing B 0.0382042
RBM39 RNA binding motif protein 39 0.0375378
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.037355
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0362245
SMAD3 SMAD family member 3 0.0352892
PRRC2C proline-rich coiled-coil 2C 0.0348458
RPL23 ribosomal protein L23 0.0347648
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0341725
CANX calnexin 0.0339142
PTPRM protein tyrosine phosphatase, receptor type, M 0.0338557
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0335304
CTBP2 C-terminal binding protein 2 0.0334831
NCKAP1 NCK-associated protein 1 0.0332623
EIF4A2 eukaryotic translation initiation factor 4A2 0.0331645
ANKRD11 ankyrin repeat domain 11 0.0331223
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0330518
FTL ferritin, light polypeptide 0.0329376
CUL3 cullin 3 0.0324304
KMT2C lysine (K)-specific methyltransferase 2C 0.0324303
ZSWIM6 zinc finger, SWIM-type containing 6 0.0322536
EIF4A1 eukaryotic translation initiation factor 4A1 0.0322516
EZR ezrin 0.0317943
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0315521
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0309046
RPL41 ribosomal protein L41 0.0304787
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0302461
THSD4 thrombospondin, type I, domain containing 4 0.0296219
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0296044
GOLGA4 golgin A4 0.0294847
PRELID2 PRELI domain containing 2 0.0293366
ARHGAP26 Rho GTPase activating protein 26 0.0292928
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0291544
UTRN utrophin 0.0291493
HSPA8 heat shock 70kDa protein 8 0.0291194
COPA coatomer protein complex, subunit alpha 0.0290191
USP36 ubiquitin specific peptidase 36 0.028469
NDRG1 N-myc downstream regulated 1 0.0277687
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0277678
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0276219
PARD3 par-3 family cell polarity regulator 0.0275045
MCL1 myeloid cell leukemia 1 0.0272003
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0270862
SRRM2 serine/arginine repetitive matrix 2 0.0269928

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.312877
IGF2 insulin-like growth factor 2 -0.0974383
FTH1 ferritin, heavy polypeptide 1 -0.0891538
EGR1 early growth response 1 -0.0744635
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.06452
TXNRD1 thioredoxin reductase 1 -0.0619525
OSMR oncostatin M receptor -0.0581388
VIM vimentin -0.0527535
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0370464
TMSB10 thymosin beta 10 -0.0350895
ATP5F1B ATP synthase F1 subunit beta -0.0348691
HDAC9 histone deacetylase 9 -0.0344729
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0336909
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0306268
IGFBP4 insulin-like growth factor binding protein 4 -0.02932
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0290597
S100A6 S100 calcium binding protein A6 -0.0280385
TFPI2 tissue factor pathway inhibitor 2 -0.0276427
NSUN6 NOP2/Sun domain family, member 6 -0.0275454
RTN4 reticulon 4 -0.0247511
S100A10 S100 calcium binding protein A10 -0.0237162
AK1 adenylate kinase 1 -0.0237124
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0234235
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0233009
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.023092
GRAMD1B GRAM domain containing 1B -0.0226641
PFN1 profilin 1 -0.0225186
BIRC3 baculoviral IAP repeat containing 3 -0.0219544
RPS25 ribosomal protein S25 -0.0216147
IL6 interleukin 6 -0.0212667
NNMT nicotinamide N-methyltransferase -0.0210266
LOC102724023 ES1 protein homolog, mitochondrial -0.0202171
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.020119
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0193251
RHOA ras homolog family member A -0.0188888
ANKRD28 ankyrin repeat domain 28 -0.0177673
NTN4 netrin 4 -0.0177097
ARL5B ADP-ribosylation factor-like 5B -0.0169925
ASTN2 astrotactin 2 -0.0167919
DENND4A DENN/MADD domain containing 4A -0.0166591
MFF mitochondrial fission factor -0.0163654
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0163549
HSPB1 heat shock 27kDa protein 1 -0.0162347
TM4SF1 transmembrane 4 L six family member 1 -0.0162068
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0160824
MYADM myeloid-associated differentiation marker -0.0157476
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.015686
PCNX4 pecanex 4 -0.0154329
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0154143
CENPE centromere protein E, 312kDa -0.015269
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.015258
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0151034
HDGF hepatoma-derived growth factor -0.0150726
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase -0.0150686
TDP2 tyrosyl-DNA phosphodiesterase 2 -0.0150367
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0148561
ACTG1 actin gamma 1 -0.0146539
HMGA1 high mobility group AT-hook 1 -0.0146033
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like -0.0145701
RIN2 Ras and Rab interactor 2 -0.0145579
RNASEH2A ribonuclease H2, subunit A -0.0142359
RPS15 ribosomal protein S15 -0.0141306
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0140764
LRP10 low density lipoprotein receptor-related protein 10 -0.0139524
VEZT vezatin, adherens junctions transmembrane protein -0.0139155
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0139145
NSRP1 nuclear speckle splicing regulatory protein 1 -0.0138703
ERBIN erbb2 interacting protein -0.0138533
RFX3 regulatory factor X, 3 (influences HLA class II expression) -0.0138288
PNPLA8 patatin-like phospholipase domain containing 8 -0.0137769
RPS23 ribosomal protein S23 -0.0137299
NAV3 neuron navigator 3 -0.0136852
LOC112694756 uncharaterized LOC112694756 -0.0136692
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0136656
BABAM2 BRISC and BRCA1 A complex member 2 -0.0136643
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0134806
ZBTB20 zinc finger and BTB domain containing 20 -0.0133934
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0131225
RAB10 RAB10, member RAS oncogene family -0.0128982
MKI67 marker of proliferation Ki-67 -0.0128895
NUP58 nucleoporin 58 -0.0128859
RPS10 ribosomal protein S10 -0.0127268
CYB5R3 cytochrome b5 reductase 3 -0.0124119
BMP5 bone morphogenetic protein 5 -0.0123651
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 -0.0122476
MCTP1 multiple C2 domains, transmembrane 1 -0.0122102
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0122047
POTEF POTE ankyrin domain family, member F -0.0121413
GLIS3 GLIS family zinc finger 3 -0.0121216
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 -0.012086
GOSR1 golgi SNAP receptor complex member 1 -0.0120657
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0120422
RPL39 ribosomal protein L39 -0.0119412
EIF1 eukaryotic translation initiation factor 1 -0.0118922
MAP1B microtubule-associated protein 1B -0.0117541
ACACA acetyl-CoA carboxylase alpha -0.0115307
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0113317
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -0.0113302
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0112927
C15ORF48 chromosome 15 open reading frame 48 -0.0112326