Fusidic acid_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LAMB3 laminin, beta 3 0.229819
BACE2 beta-site APP-cleaving enzyme 2 0.159754
PDE4D phosphodiesterase 4D, cAMP-specific 0.151008
EGFR epidermal growth factor receptor 0.131028
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.107426
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0932518
ERRFI1 ERBB receptor feedback inhibitor 1 0.0858015
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0758636
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0751444
SAMD4A sterile alpha motif domain containing 4A 0.0750752
GRB10 growth factor receptor-bound protein 10 0.0726675
CEMIP cell migration inducing protein, hyaluronan binding 0.0715366
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0708946
EFNA5 ephrin-A5 0.0695756
AKAP13 A kinase (PRKA) anchor protein 13 0.0693691
HMGA2 high mobility group AT-hook 2 0.0654284
MYO1E myosin IE 0.0653189
NDRG1 N-myc downstream regulated 1 0.064277
LIMCH1 LIM and calponin homology domains 1 0.0571448
LAMC2 laminin, gamma 2 0.057031
FMN1 formin 1 0.0564436
DSPP dentin sialophosphoprotein 0.0560694
ATOSA atos homolog A 0.0558821
TJP1 tight junction protein 1 0.0554838
SMOC1 SPARC related modular calcium binding 1 0.0552838
BCAR3 breast cancer anti-estrogen resistance 3 0.0551144
ARHGAP21 Rho GTPase activating protein 21 0.0545936
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0522092
MTUS1 microtubule associated tumor suppressor 1 0.0513504
OGA O-GlcNAcase 0.0504514
SLTM SAFB-like, transcription modulator 0.0482998
CD44 CD44 molecule (Indian blood group) 0.0479327
FRYL FRY-like 0.046589
MYO5B myosin VB 0.0464365
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0459477
TXNRD1 thioredoxin reductase 1 0.0446499
PLAUR plasminogen activator, urokinase receptor 0.0442913
VEGFA vascular endothelial growth factor A 0.0439092
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0435386
NABP1 nucleic acid binding protein 1 0.0428565
F3 coagulation factor III (thromboplastin, tissue factor) 0.0427161
ADARB1 adenosine deaminase, RNA-specific, B1 0.0426775
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0420152
DOCK5 dedicator of cytokinesis 5 0.0418274
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0413751
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0412042
IQGAP1 IQ motif containing GTPase activating protein 1 0.0404507
AHNAK AHNAK nucleoprotein 0.0402277
EIF1 eukaryotic translation initiation factor 1 0.0401909
MACF1 microtubule-actin crosslinking factor 1 0.0400078
SVIL supervillin 0.0399826
PCBP2 poly(rC) binding protein 2 0.0395386
DSG2 desmoglein 2 0.0392972
FAM13A family with sequence similarity 13, member A 0.039034
KTN1 kinectin 1 (kinesin receptor) 0.0389367
NEBL nebulette 0.0388339
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0385831
HSPA8 heat shock 70kDa protein 8 0.0384361
CTBP2 C-terminal binding protein 2 0.037516
BMAL2 basic helix-loop-helix ARNT like 2 0.0374168
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0373543
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0368609
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0367724
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0365848
IGF2 insulin-like growth factor 2 0.0361251
LDHA lactate dehydrogenase A 0.0353759
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0353236
LMO7 LIM domain 7 0.0347383
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0346855
GLCCI1 glucocorticoid induced 1 0.0343135
PRELID2 PRELI domain containing 2 0.0342939
USP53 ubiquitin specific peptidase 53 0.0336138
EHBP1 EH domain binding protein 1 0.0336075
TXNIP thioredoxin interacting protein 0.0334266
CANX calnexin 0.0329806
LAMA4 laminin, alpha 4 0.0328882
INHBA inhibin, beta A 0.0326707
MPRIP myosin phosphatase Rho interacting protein 0.0322047
ATP13A3 ATPase type 13A3 0.0321241
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.032002
COL1A2 collagen, type I, alpha 2 0.0319058
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 0.0318917
OFD1 oral-facial-digital syndrome 1 0.0318308
VGLL3 vestigial-like family member 3 0.0317179
BBX bobby sox homolog (Drosophila) 0.0315843
RABGAP1L RAB GTPase activating protein 1-like 0.0315611
HLA-B major histocompatibility complex, class I, B 0.0314716
KPNB1 karyopherin (importin) beta 1 0.0313677
IGFBP3 insulin-like growth factor binding protein 3 0.0313027
FNDC3B fibronectin type III domain containing 3B 0.0310686
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0309588
SLK STE20-like kinase 0.0308259
FNBP1L formin binding protein 1-like 0.0306351
TGFBI transforming growth factor, beta-induced, 68kDa 0.0305807
KYNU kynureninase 0.03012
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0300083
NPTN neuroplastin 0.029983
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0298668
CMIP c-Maf inducing protein 0.0298502
PTPRM protein tyrosine phosphatase, receptor type, M 0.0297519

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.178606
SEC31A SEC31 homolog A (S. cerevisiae) -0.0734116
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0641432
FN1 fibronectin 1 -0.0573544
RORA RAR-related orphan receptor A -0.057056
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0528731
S100A10 S100 calcium binding protein A10 -0.0528203
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0498127
CYRIB CYFIP related Rac1 interactor B -0.0497275
STAU1 staufen double-stranded RNA binding protein 1 -0.0488213
ZMYND8 zinc finger, MYND-type containing 8 -0.0457025
NRG1 neuregulin 1 -0.0455525
LMNA lamin A/C -0.0444984
PARP8 poly (ADP-ribose) polymerase family, member 8 -0.0443192
IFIH1 interferon induced with helicase C domain 1 -0.0440707
FTL ferritin, light polypeptide -0.0440501
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0439214
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0437718
ARF1 ADP-ribosylation factor 1 -0.0436867
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0436816
PDE10A phosphodiesterase 10A -0.0431006
MAML2 mastermind-like 2 (Drosophila) -0.0429983
PDIA3 protein disulfide isomerase family A, member 3 -0.0414552
DIDO1 death inducer-obliterator 1 -0.0411544
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0409222
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0402507
GOLGB1 golgin B1 -0.0402396
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.039404
RPS23 ribosomal protein S23 -0.0393547
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0390371
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0388312
LOC112694756 uncharaterized LOC112694756 -0.0384344
DGKD diacylglycerol kinase, delta 130kDa -0.0381416
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0375722
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.0372806
FRMD5 FERM domain containing 5 -0.037149
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0368137
PTBP3 polypyrimidine tract binding protein 3 -0.0367155
TRA2A transformer 2 alpha homolog (Drosophila) -0.03671
VPS37B vacuolar protein sorting 37 homolog B (S. cerevisiae) -0.0365743
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0363593
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0361993
CCDC47 coiled-coil domain containing 47 -0.0359391
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0358231
LTN1 listerin E3 ubiquitin protein ligase 1 -0.0357931
NT5C2 5'-nucleotidase, cytosolic II -0.0356174
DENND1A DENN/MADD domain containing 1A -0.0353507
MATR3 matrin 3 -0.0353178
CDH13 cadherin 13 -0.0345962
PAPOLA poly(A) polymerase alpha -0.0345545
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0343675
ZNF207 zinc finger protein 207 -0.0339897
ADNP activity-dependent neuroprotector homeobox -0.0339851
COPA coatomer protein complex, subunit alpha -0.0339605
VMP1 vacuole membrane protein 1 -0.0334029
KIRREL1 kirre like nephrin family adhesion molecule 1 -0.033213
LUC7L2 LUC7-like 2 (S. cerevisiae) -0.0329243
ARHGAP5 Rho GTPase activating protein 5 -0.032764
WSB1 WD repeat and SOCS box containing 1 -0.0327105
DENND4A DENN/MADD domain containing 4A -0.0324709
NALF1 NALCN channel auxiliary factor 1 -0.0323568
MAP1B microtubule-associated protein 1B -0.0321512
BCAS3 breast carcinoma amplified sequence 3 -0.0319243
MYL12B myosin, light chain 12B, regulatory -0.0319107
ZNF609 zinc finger protein 609 -0.0316538
ERBB2 erb-b2 receptor tyrosine kinase 2 -0.0316529
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) -0.0315665
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0313865
BIRC6 baculoviral IAP repeat containing 6 -0.0311304
KDM2A lysine (K)-specific demethylase 2A -0.0310844
NPAS3 neuronal PAS domain protein 3 -0.0308741
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0308175
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0308031
KDM1A lysine (K)-specific demethylase 1A -0.0306493
TEX10 testis expressed 10 -0.0305992
RYK receptor-like tyrosine kinase -0.030457
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0302589
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0302257
SETD5 SET domain containing 5 -0.0301343
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0300462
RNF130 ring finger protein 130 -0.0299617
EZR ezrin -0.0298231
MBNL1 muscleblind-like splicing regulator 1 -0.0296281
PDE4B phosphodiesterase 4B, cAMP-specific -0.0295819
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0295451
NF1 neurofibromin 1 -0.0295251
UBE3A ubiquitin protein ligase E3A -0.0294834
THBS1 thrombospondin 1 -0.0293879
ELOF1 elongation factor 1 homolog (S. cerevisiae) -0.0293193
GNAS GNAS complex locus -0.0282179
ANKRD28 ankyrin repeat domain 28 -0.0281793
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0279893
AHR aryl hydrocarbon receptor -0.0278944
SH3GLB1 SH3-domain GRB2-like endophilin B1 -0.0278835
STK17A serine/threonine kinase 17a -0.0277113
CERS6 ceramide synthase 6 -0.0276501
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.027564
HDAC9 histone deacetylase 9 -0.0275556
OASL 2'-5'-oligoadenylate synthetase-like -0.0275532
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0272958