Fusidic acid_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 0.217767
PDE10A phosphodiesterase 10A 0.183131
DST dystonin 0.160731
COL8A1 collagen, type VIII, alpha 1 0.101791
KYNU kynureninase 0.0990293
COL5A2 collagen, type V, alpha 2 0.0954648
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0912146
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0863089
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0852056
GRAMD1B GRAM domain containing 1B 0.0786147
ASPH aspartate beta-hydroxylase 0.0779532
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0721956
SMOC1 SPARC related modular calcium binding 1 0.069024
CTIF CBP80/20-dependent translation initiation factor 0.0674502
P3H2 prolyl 3-hydroxylase 2 0.0671301
FMNL2 formin-like 2 0.0659257
GDA guanine deaminase 0.0648452
MCL1 myeloid cell leukemia 1 0.0639247
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0625805
DOCK4 dedicator of cytokinesis 4 0.0588594
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0580986
PDLIM5 PDZ and LIM domain 5 0.0578106
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0555202
ESYT2 extended synaptotagmin-like protein 2 0.0551337
TRIO trio Rho guanine nucleotide exchange factor 0.0479207
EZR ezrin 0.0463739
FNDC3A fibronectin type III domain containing 3A 0.0459751
MYOF myoferlin 0.045423
PRKN parkin RBR E3 ubiquitin protein ligase 0.0445525
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0437397
SLC38A2 solute carrier family 38, member 2 0.0437346
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0425994
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0423784
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.042268
PRELID2 PRELI domain containing 2 0.041452
ZSWIM6 zinc finger, SWIM-type containing 6 0.0403631
CTBP2 C-terminal binding protein 2 0.0403204
TGFBR1 transforming growth factor, beta receptor 1 0.0394345
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0390258
PKM pyruvate kinase, muscle 0.0388468
SH3KBP1 SH3-domain kinase binding protein 1 0.0386483
ENO1 enolase 1, (alpha) 0.0383637
COL4A5 collagen, type IV, alpha 5 0.0369726
TPT1 tumor protein, translationally-controlled 1 0.0365559
MYH9 myosin, heavy chain 9, non-muscle 0.0357015
SAMD4A sterile alpha motif domain containing 4A 0.0349014
MAML3 mastermind-like 3 (Drosophila) 0.0348455
ANTXR1 anthrax toxin receptor 1 0.0347415
RPL41 ribosomal protein L41 0.0345608
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0343878
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0343503
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0336126
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0335403
INTS6 integrator complex subunit 6 0.0332666
ZEB2 zinc finger E-box binding homeobox 2 0.0318028
ZNF638 zinc finger protein 638 0.0316746
SRRM2 serine/arginine repetitive matrix 2 0.0314962
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0311096
HDAC4 histone deacetylase 4 0.0308452
GPHN gephyrin 0.030672
FAT1 FAT atypical cadherin 1 0.0295414
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0294562
TPR translocated promoter region, nuclear basket protein 0.0294377
BMP6 bone morphogenetic protein 6 0.0288352
SQSTM1 sequestosome 1 0.0286147
CEP72 centrosomal protein 72kDa 0.0285347
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0282797
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0281147
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0280112
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0279671
RAB3B RAB3B, member RAS oncogene family 0.0273402
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0272792
NAP1L1 nucleosome assembly protein 1-like 1 0.0265417
BCAR3 breast cancer anti-estrogen resistance 3 0.0259602
ADARB1 adenosine deaminase, RNA-specific, B1 0.0258013
EXT1 exostosin glycosyltransferase 1 0.025602
MACF1 microtubule-actin crosslinking factor 1 0.0255937
RPL37A ribosomal protein L37a 0.0254231
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0253904
DOCK5 dedicator of cytokinesis 5 0.0253816
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0252616
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0252042
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 0.0251618
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0251542
CLTC clathrin, heavy chain (Hc) 0.0249286
AKAP13 A kinase (PRKA) anchor protein 13 0.0249229
EPHA4 EPH receptor A4 0.0245076
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0244992
AGTPBP1 ATP/GTP binding protein 1 0.0243058
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0242561
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0242014
HSPA8 heat shock 70kDa protein 8 0.0239706
FAM107B family with sequence similarity 107, member B 0.0237666
GOLGB1 golgin B1 0.0235169
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0235013
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0234324
CREB5 cAMP responsive element binding protein 5 0.0233718
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0233
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0232429
CALR calreticulin 0.0232061

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.275238
FN1 fibronectin 1 -0.230659
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.178529
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.090145
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0883252
NAMPT nicotinamide phosphoribosyltransferase -0.0877915
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0849029
VIM vimentin -0.0813706
IGFBP3 insulin-like growth factor binding protein 3 -0.0760716
TFPI2 tissue factor pathway inhibitor 2 -0.0739234
TMSB10 thymosin beta 10 -0.0701263
TM4SF1 transmembrane 4 L six family member 1 -0.0612233
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0517911
S100A6 S100 calcium binding protein A6 -0.051683
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0504619
FTL ferritin, light polypeptide -0.046934
NRCAM neuronal cell adhesion molecule -0.0456559
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0440401
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0439764
STC1 stanniocalcin 1 -0.0431723
NCKAP5 NCK-associated protein 5 -0.0425969
SRGN serglycin -0.0406929
FTH1 ferritin, heavy polypeptide 1 -0.0389456
GNAS GNAS complex locus -0.0370152
RPLP0 ribosomal protein, large, P0 -0.0352152
ATP5F1B ATP synthase F1 subunit beta -0.0342169
SLC16A6 solute carrier family 16, member 6 -0.0333736
CDH13 cadherin 13 -0.032856
PCBP3 poly(rC) binding protein 3 -0.0320941
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0319362
TMX4 thioredoxin-related transmembrane protein 4 -0.0316117
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0314886
SOX4 SRY (sex determining region Y)-box 4 -0.0312877
S100A10 S100 calcium binding protein A10 -0.0311593
PSD3 pleckstrin and Sec7 domain containing 3 -0.0301002
RTN4 reticulon 4 -0.0296674
SBF2 SET binding factor 2 -0.0296115
PDIA3 protein disulfide isomerase family A, member 3 -0.02961
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0289786
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0285688
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0282603
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0280564
EIF1 eukaryotic translation initiation factor 1 -0.0271646
PTGR1 prostaglandin reductase 1 -0.0259475
MFF mitochondrial fission factor -0.0258421
LMAN1 lectin, mannose-binding, 1 -0.0256307
PGK1 phosphoglycerate kinase 1 -0.0252125
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0242141
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0240139
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0239863
PTMA prothymosin, alpha -0.0234329
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0231664
UBC ubiquitin C -0.0230478
CTNND2 catenin (cadherin-associated protein), delta 2 -0.0226745
BMERB1 bMERB domain containing 1 -0.0223389
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 -0.0223337
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0223057
MT2A metallothionein 2A -0.022083
RPL12 ribosomal protein L12 -0.0219798
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0219535
LOC112694756 uncharaterized LOC112694756 -0.0219025
ADGRB3 adhesion G protein-coupled receptor B3 -0.0216947
ASTN2 astrotactin 2 -0.0216452
PFN1 profilin 1 -0.0213646
PDIA6 protein disulfide isomerase family A, member 6 -0.0212774
BCAS3 breast carcinoma amplified sequence 3 -0.0212675
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0212384
ADGRD1 adhesion G protein-coupled receptor D1 -0.0210341
WARS1 tryptophanyl-tRNA synthetase 1 -0.0207419
FRMD4B FERM domain containing 4B -0.0206603
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0205796
RPL39 ribosomal protein L39 -0.0205241
HDAC8 histone deacetylase 8 -0.0203992
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0200461
CRLF2 cytokine receptor-like factor 2 -0.0200067
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0199352
FOXC1 forkhead box C1 -0.019934
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0199162
TGFBI transforming growth factor, beta-induced, 68kDa -0.0197436
TKT transketolase -0.0195838
PDGFA platelet-derived growth factor alpha polypeptide -0.0194867
RACK1 receptor for activated C kinase 1 -0.0193631
PDE4B phosphodiesterase 4B, cAMP-specific -0.0192798
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0190393
SOX6 SRY (sex determining region Y)-box 6 -0.0187835
FNBP1 formin binding protein 1 -0.0187137
CXXC1 CXXC finger protein 1 -0.0185981
B2M beta-2-microglobulin -0.0185544
OSMR oncostatin M receptor -0.0184557
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.0182196
LAMB1 laminin, beta 1 -0.0180886
DPYD dihydropyrimidine dehydrogenase -0.0180399
RPS4X ribosomal protein S4, X-linked -0.0179972
PRKD3 protein kinase D3 -0.0179604
MAP1B microtubule-associated protein 1B -0.0178385
RPS24 ribosomal protein S24 -0.0177935
TPM4 tropomyosin 4 -0.0177723
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0177198
RPS28 ribosomal protein S28 -0.0175318
NCOA7 nuclear receptor coactivator 7 -0.0172778