Fusidic acid_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
STC1 stanniocalcin 1 0.169406
ENO1 enolase 1, (alpha) 0.112218
CD44 CD44 molecule (Indian blood group) 0.109251
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0876731
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0849409
VEGFA vascular endothelial growth factor A 0.0837202
PKM pyruvate kinase, muscle 0.0827096
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0780887
SMAD3 SMAD family member 3 0.0770718
ANGPTL4 angiopoietin-like 4 0.0699667
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0698658
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0695572
COL6A2 collagen, type VI, alpha 2 0.068815
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0668468
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0664695
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.063601
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0635193
ZBTB38 zinc finger and BTB domain containing 38 0.0625303
NRIP1 nuclear receptor interacting protein 1 0.0623933
LDHA lactate dehydrogenase A 0.0595595
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0572412
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0553506
ASPH aspartate beta-hydroxylase 0.0538805
MYH9 myosin, heavy chain 9, non-muscle 0.0537166
TGM2 transglutaminase 2 0.0523498
FAT1 FAT atypical cadherin 1 0.0521188
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.051621
MT2A metallothionein 2A 0.0512233
SVIL supervillin 0.0495886
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0493051
NAV2 neuron navigator 2 0.0493017
WWTR1 WW domain containing transcription regulator 1 0.0472677
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0465395
HDAC9 histone deacetylase 9 0.0448958
CALR calreticulin 0.0445909
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0417981
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0412756
RUNX1 runt-related transcription factor 1 0.0407462
IFI44L interferon-induced protein 44-like 0.0404317
GOLGB1 golgin B1 0.039775
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0395425
APP amyloid beta (A4) precursor protein 0.0393442
BHLHE40 basic helix-loop-helix family, member e40 0.0390807
EEF2 eukaryotic translation elongation factor 2 0.0381529
MYO1B myosin IB 0.0380415
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0378156
USP9X ubiquitin specific peptidase 9, X-linked 0.0375182
FTH1 ferritin, heavy polypeptide 1 0.037483
RPS17 ribosomal protein S17 0.0362305
ARRDC3 arrestin domain containing 3 0.036074
MMP2 matrix metallopeptidase 2 0.0360497
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0358527
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0352173
TOP1 topoisomerase (DNA) I 0.035181
RPS12 ribosomal protein S12 0.0349293
ATP13A3 ATPase type 13A3 0.0348623
VMP1 vacuole membrane protein 1 0.0346316
RPS3 ribosomal protein S3 0.0345326
AKAP12 A kinase (PRKA) anchor protein 12 0.0338733
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0333572
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0332269
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0325249
GLS2 glutaminase 2 (liver, mitochondrial) 0.0325203
DST dystonin 0.0323707
FNDC3A fibronectin type III domain containing 3A 0.0319375
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0318541
APLP2 amyloid beta (A4) precursor-like protein 2 0.0318073
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0316293
DSCAM Down syndrome cell adhesion molecule 0.0311859
HSPA8 heat shock 70kDa protein 8 0.0308493
ERRFI1 ERBB receptor feedback inhibitor 1 0.0306571
IFI44 interferon-induced protein 44 0.0306527
IFI6 interferon, alpha-inducible protein 6 0.030498
OPTN optineurin 0.0304787
SAMD9 sterile alpha motif domain containing 9 0.030461
TMEM132D transmembrane protein 132D 0.029721
H1-0 H1.0 linker histone 0.029544
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0292538
KYNU kynureninase 0.0291344
UBA6 ubiquitin-like modifier activating enzyme 6 0.0288542
SRRM2 serine/arginine repetitive matrix 2 0.0287498
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0284613
TPM3 tropomyosin 3 0.028254
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0281354
ELL2 elongation factor, RNA polymerase II, 2 0.0279926
YEATS2 YEATS domain containing 2 0.0274863
FLNB filamin B, beta 0.0268473
NOTCH2 notch 2 0.0265671
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.0262734
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0258975
PCM1 pericentriolar material 1 0.0256121
MACF1 microtubule-actin crosslinking factor 1 0.0256094
APCDD1L adenomatosis polyposis coli down-regulated 1-like 0.0253728
ACTN4 actinin, alpha 4 0.0252577
ESYT2 extended synaptotagmin-like protein 2 0.0252233
AFAP1 actin filament associated protein 1 0.0251429
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0251006
SOD2 superoxide dismutase 2, mitochondrial 0.0250244
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0248918
KTN1 kinectin 1 (kinesin receptor) 0.0246875

decreased expression

Symbol Name Standardized Value
COL1A1 collagen, type I, alpha 1 -0.288998
VIM vimentin -0.198219
FN1 fibronectin 1 -0.186144
COL1A2 collagen, type I, alpha 2 -0.172686
HLA-B major histocompatibility complex, class I, B -0.124096
CDH13 cadherin 13 -0.1036
TIMP3 TIMP metallopeptidase inhibitor 3 -0.102909
ZMYND8 zinc finger, MYND-type containing 8 -0.0706348
ZEB1 zinc finger E-box binding homeobox 1 -0.0675754
TMSB10 thymosin beta 10 -0.0646036
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0620821
COL6A1 collagen, type VI, alpha 1 -0.0620753
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0620603
ARL4C ADP-ribosylation factor-like 4C -0.0563603
RRBP1 ribosome binding protein 1 -0.0560663
TPM4 tropomyosin 4 -0.0554818
PSD3 pleckstrin and Sec7 domain containing 3 -0.0540021
GNAS GNAS complex locus -0.0533863
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0522985
HLA-C major histocompatibility complex, class I, C -0.0497131
TNNC1 troponin C type 1 (slow) -0.0488589
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0485725
PDIA3 protein disulfide isomerase family A, member 3 -0.0481498
IER3 immediate early response 3 -0.0479741
CALU calumenin -0.0469834
RAB7A RAB7A, member RAS oncogene family -0.0464888
TNS3 tensin 3 -0.0445137
EGR1 early growth response 1 -0.0437839
IGFBP5 insulin-like growth factor binding protein 5 -0.0434409
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0431992
PDE4D phosphodiesterase 4D, cAMP-specific -0.0431023
ACTG1 actin gamma 1 -0.0419184
MAML2 mastermind-like 2 (Drosophila) -0.0417968
PTMA prothymosin, alpha -0.0414254
DLG1 discs, large homolog 1 (Drosophila) -0.0406192
NAV1 neuron navigator 1 -0.0397499
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0393885
VCAN versican -0.0386014
COL4A2 collagen, type IV, alpha 2 -0.0381466
ITGA1 integrin, alpha 1 -0.0363706
PTPRG protein tyrosine phosphatase, receptor type, G -0.0352361
PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 -0.0342458
CAVIN1 caveolae associated protein 1 -0.0342401
ITGA11 integrin, alpha 11 -0.0338299
COL5A2 collagen, type V, alpha 2 -0.0338127
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0335444
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0329673
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0327268
RTN4 reticulon 4 -0.0325976
CLMP CXADR-like membrane protein -0.0323508
S100A10 S100 calcium binding protein A10 -0.0322405
IL1B interleukin 1, beta -0.0319082
RAI14 retinoic acid induced 14 -0.0317183
EML5 echinoderm microtubule associated protein like 5 -0.0312876
CA12 carbonic anhydrase XII -0.0305541
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0299108
HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 -0.029741
FTL ferritin, light polypeptide -0.0295778
RFX8 RFX family member 8, lacking RFX DNA binding domain -0.0295621
MX2 MX dynamin-like GTPase 2 -0.0294669
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 -0.0294374
COLEC10 collectin sub-family member 10 (C-type lectin) -0.029408
KCNMB3 potassium channel subfamily M regulatory beta subunit 3 -0.0290435
SH3RF3 SH3 domain containing ring finger 3 -0.0289861
LOC102724023 ES1 protein homolog, mitochondrial -0.0285131
CAPZB capping protein (actin filament) muscle Z-line, beta -0.0285017
XAF1 XIAP associated factor 1 -0.0284844
NRP1 neuropilin 1 -0.028463
DSTN destrin (actin depolymerizing factor) -0.0284033
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0277887
LPAR1 lysophosphatidic acid receptor 1 -0.0277218
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0274451
FRMD4A FERM domain containing 4A -0.0273417
MMP12 matrix metallopeptidase 12 -0.0271241
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0270655
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0267023
COL7A1 collagen, type VII, alpha 1 -0.0263992
OXR1 oxidation resistance 1 -0.0261265
LMNA lamin A/C -0.0260886
GPR173 G protein-coupled receptor 173 -0.0259394
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0257135
SAMHD1 SAM domain and HD domain 1 -0.0253593
TMEM263 transmembrane protein 263 -0.0251553
MTSS1 metastasis suppressor 1 -0.0250824
NREP neuronal regeneration related protein -0.0248651
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0248481
FBXO11 F-box protein 11 -0.0246445
PXDN peroxidasin -0.0244757
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0241964
POU2F2 POU class 2 homeobox 2 -0.0240384
TMEM165 transmembrane protein 165 -0.0240315
F3 coagulation factor III (thromboplastin, tissue factor) -0.0239999
CADM1 cell adhesion molecule 1 -0.023967
ZNFX1 zinc finger, NFX1-type containing 1 -0.023864
S100A6 S100 calcium binding protein A6 -0.0233444
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0232823
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0227697
SBF2 SET binding factor 2 -0.0226127
RIPOR3 RIPOR family member 3 -0.0225859
TPM1 tropomyosin 1 (alpha) -0.0223344