Fusidic acid_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FNDC3B fibronectin type III domain containing 3B 0.129389
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0923375
SMAD3 SMAD family member 3 0.0811698
DST dystonin 0.0806654
FMNL2 formin-like 2 0.0801887
TRIO trio Rho guanine nucleotide exchange factor 0.0756311
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0742792
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0720405
MACF1 microtubule-actin crosslinking factor 1 0.07156
IGFBP3 insulin-like growth factor binding protein 3 0.0631458
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0626051
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0601973
BIRC3 baculoviral IAP repeat containing 3 0.0578711
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0538974
CAPRIN2 caprin family member 2 0.0530729
GPC5 glypican 5 0.0510295
ANO6 anoctamin 6 0.048788
ERRFI1 ERBB receptor feedback inhibitor 1 0.0471711
BASP1 brain abundant, membrane attached signal protein 1 0.0463336
RNF213 ring finger protein 213 0.0460098
TXNIP thioredoxin interacting protein 0.0450645
FLNB filamin B, beta 0.0448653
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0419486
CANX calnexin 0.0390447
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0390343
CXCL8 chemokine (C-X-C motif) ligand 8 0.038146
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0380862
CEMIP2 cell migration inducing hyaluronidase 2 0.0364591
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0363243
MYOF myoferlin 0.036032
BHLHE40 basic helix-loop-helix family, member e40 0.0355951
CLIP1 CAP-GLY domain containing linker protein 1 0.035453
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0354207
FTH1 ferritin, heavy polypeptide 1 0.03388
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0332946
EGFR epidermal growth factor receptor 0.033234
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0331373
ACTN1 actinin, alpha 1 0.032872
AKAP12 A kinase (PRKA) anchor protein 12 0.0326174
BICD1 bicaudal D homolog 1 (Drosophila) 0.0325389
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.032262
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0320745
SASH1 SAM and SH3 domain containing 1 0.0319724
CEP250 centrosomal protein 250kDa 0.0317586
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0315366
AFDN afadin, adherens junction formation factor 0.0315029
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0314559
SDC4 syndecan 4 0.0307453
JMJD1C jumonji domain containing 1C 0.0307389
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 0.0305922
MYO9A myosin IXA 0.0303756
THSD4 thrombospondin, type I, domain containing 4 0.0303263
NGLY1 N-glycanase 1 0.0301708
ITCH itchy E3 ubiquitin protein ligase 0.0300189
LPP LIM domain containing preferred translocation partner in lipoma 0.0299659
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.029932
FMN1 formin 1 0.0296904
SOD2 superoxide dismutase 2, mitochondrial 0.0296689
ANGPTL4 angiopoietin-like 4 0.0294129
FN1 fibronectin 1 0.0293748
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0292866
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0291925
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0291221
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0285438
PARD3 par-3 family cell polarity regulator 0.0282776
ATM ATM serine/threonine kinase 0.0279146
NAMPT nicotinamide phosphoribosyltransferase 0.0277887
ZBTB38 zinc finger and BTB domain containing 38 0.0273822
MBNL2 muscleblind-like splicing regulator 2 0.0270143
SLC38A2 solute carrier family 38, member 2 0.0268232
APP amyloid beta (A4) precursor protein 0.0265067
MYO9B myosin IXB 0.0263422
ANXA1 annexin A1 0.0262726
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0258487
SVIL supervillin 0.0258201
IRAK2 interleukin-1 receptor-associated kinase 2 0.0256834
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0256457
EXT1 exostosin glycosyltransferase 1 0.025399
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0252522
ZEB1 zinc finger E-box binding homeobox 1 0.0248593
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.024735
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0246821
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0244031
SMYD3 SET and MYND domain containing 3 0.0240919
MYH9 myosin, heavy chain 9, non-muscle 0.0239807
LAMB1 laminin, beta 1 0.0237533
SH3KBP1 SH3-domain kinase binding protein 1 0.0237188
RAD51B RAD51 paralog B 0.0236936
RIN2 Ras and Rab interactor 2 0.0235864
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0235001
ELL2 elongation factor, RNA polymerase II, 2 0.0234678
CMIP c-Maf inducing protein 0.0231328
ADAM10 ADAM metallopeptidase domain 10 0.0231326
HDAC9 histone deacetylase 9 0.0229822
DTNA dystrobrevin, alpha 0.022756
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0226592
ATP13A3 ATPase type 13A3 0.0222884
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0220784
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0220576
CD163L1 CD163 molecule-like 1 0.0219625

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.465937
VIM vimentin -0.129515
PTMA prothymosin, alpha -0.0930219
TMSB10 thymosin beta 10 -0.0622912
ZNF292 zinc finger protein 292 -0.0527545
RPL23 ribosomal protein L23 -0.0484465
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0484128
GNAS GNAS complex locus -0.0476879
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0459601
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0440154
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0437713
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0417242
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0415803
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0399028
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.03936
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0363846
RACK1 receptor for activated C kinase 1 -0.0362014
PNISR PNN-interacting serine/arginine-rich protein -0.0360623
SMC4 structural maintenance of chromosomes 4 -0.0355745
CREBRF CREB3 regulatory factor -0.0354048
RBM39 RNA binding motif protein 39 -0.0345624
TUBA1B tubulin, alpha 1b -0.0339087
DEK DEK proto-oncogene -0.0334465
TUBB4B tubulin, beta 4B class IVb -0.0329448
AKAP9 A kinase (PRKA) anchor protein 9 -0.0329398
NAP1L1 nucleosome assembly protein 1-like 1 -0.0329276
H3-3B H3.3 histone B -0.0329023
ATF7IP activating transcription factor 7 interacting protein -0.0327424
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.032495
UBC ubiquitin C -0.0320722
PCBP2 poly(rC) binding protein 2 -0.031453
TAS2R14 taste receptor, type 2, member 14 -0.0313444
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0310976
PBX3 pre-B-cell leukemia homeobox 3 -0.0309863
GOLGA4 golgin A4 -0.0303864
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0303016
BIRC6 baculoviral IAP repeat containing 6 -0.030207
RSRC2 arginine/serine-rich coiled-coil 2 -0.029981
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0298497
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0295529
TPX2 TPX2, microtubule-associated -0.0294614
RPL32 ribosomal protein L32 -0.0294087
DIAPH3 diaphanous-related formin 3 -0.0287977
COPB1 coatomer protein complex, subunit beta 1 -0.0283348
RPS13 ribosomal protein S13 -0.0282227
RPS20 ribosomal protein S20 -0.0279852
ENO2 enolase 2 (gamma, neuronal) -0.027746
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 -0.027592
G3BP1 GTPase activating protein (SH3 domain) binding protein 1 -0.0273542
RPS27 ribosomal protein S27 -0.0273496
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0272615
RAB6A RAB6A, member RAS oncogene family -0.0269072
HMGA1 high mobility group AT-hook 1 -0.0265626
EIF1 eukaryotic translation initiation factor 1 -0.0265335
UBE2K ubiquitin-conjugating enzyme E2K -0.0262098
CUL5 cullin 5 -0.0261502
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0261322
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0260025
RPS12 ribosomal protein S12 -0.02593
EEF2 eukaryotic translation elongation factor 2 -0.0257956
TOP1 topoisomerase (DNA) I -0.0256584
RPL27A ribosomal protein L27a -0.0254079
VDAC1 voltage-dependent anion channel 1 -0.025388
CSDE1 cold shock domain containing E1, RNA-binding -0.0252902
S100A9 S100 calcium binding protein A9 -0.0251975
RPLP1 ribosomal protein, large, P1 -0.0250698
RABGAP1 RAB GTPase activating protein 1 -0.0250105
RPL35A ribosomal protein L35a -0.0250048
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0249833
RPS8 ribosomal protein S8 -0.0244802
RPL9 ribosomal protein L9 -0.0243178
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0242734
BRD2 bromodomain containing 2 -0.024152
WNK1 WNK lysine deficient protein kinase 1 -0.0239534
CCNI cyclin I -0.0238486
FGD6 FYVE, RhoGEF and PH domain containing 6 -0.0238385
POTEF POTE ankyrin domain family, member F -0.023781
XRN2 5'-3' exoribonuclease 2 -0.0236576
PRRC2B proline-rich coiled-coil 2B -0.0236327
RPL35 ribosomal protein L35 -0.0236289
WDPCP WD repeat containing planar cell polarity effector -0.023448
HLA-C major histocompatibility complex, class I, C -0.0233435
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0232968
RPL26 ribosomal protein L26 -0.0232379
HMGA2 high mobility group AT-hook 2 -0.0232195
RPL12 ribosomal protein L12 -0.0231821
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0231813
RPS25 ribosomal protein S25 -0.0229051
SKP1 S-phase kinase-associated protein 1 -0.0228695
TRPM7 transient receptor potential cation channel, subfamily M, member 7 -0.022707
ZNF207 zinc finger protein 207 -0.0224376
MBNL1 muscleblind-like splicing regulator 1 -0.0224084
TPI1 triosephosphate isomerase 1 -0.0223309
RPS23 ribosomal protein S23 -0.0222847
ZBTB43 zinc finger and BTB domain containing 43 -0.02226
IPO7 importin 7 -0.0221894
RRBP1 ribosome binding protein 1 -0.0221375
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa -0.0220612
HM13 histocompatibility (minor) 13 -0.0220153
RPS6 ribosomal protein S6 -0.0219564