Fusidic acid_hTERT-HPNE Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Fusidic acid perturbation in hTERT-HPNE cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Fusidic acid_hTERT-HPNE drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.185938
HMGA2 high mobility group AT-hook 2 0.173781
STC1 stanniocalcin 1 0.158252
CXCL8 chemokine (C-X-C motif) ligand 8 0.154297
INHBA inhibin, beta A 0.146302
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.105547
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0974624
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0917419
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0893961
ASPH aspartate beta-hydroxylase 0.0830196
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.068775
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0685418
FNDC3A fibronectin type III domain containing 3A 0.0679669
COL6A2 collagen, type VI, alpha 2 0.0646485
EXT1 exostosin glycosyltransferase 1 0.064494
JARID2 jumonji, AT rich interactive domain 2 0.063704
LOX lysyl oxidase 0.0630889
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0615057
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0597488
MACF1 microtubule-actin crosslinking factor 1 0.0581648
CANX calnexin 0.0575043
LDHA lactate dehydrogenase A 0.0544263
ENO1 enolase 1, (alpha) 0.054048
FNDC3B fibronectin type III domain containing 3B 0.053124
MMP1 matrix metallopeptidase 1 0.0519327
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0454732
VCL vinculin 0.0432314
NOTCH2 notch 2 0.0423483
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0420175
AHNAK AHNAK nucleoprotein 0.0415579
HLA-B major histocompatibility complex, class I, B 0.0415577
ERRFI1 ERBB receptor feedback inhibitor 1 0.0408559
MAML2 mastermind-like 2 (Drosophila) 0.0394491
ZBTB38 zinc finger and BTB domain containing 38 0.0391052
CALR calreticulin 0.0380722
TGFBI transforming growth factor, beta-induced, 68kDa 0.0377972
LIMS1 LIM and senescent cell antigen-like domains 1 0.0377917
SOD2 superoxide dismutase 2, mitochondrial 0.0371577
ACTN1 actinin, alpha 1 0.0369317
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0367536
PALLD palladin, cytoskeletal associated protein 0.0361078
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0360111
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0359514
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0354746
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0345873
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0345076
HDAC9 histone deacetylase 9 0.0340123
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0337457
COL6A3 collagen, type VI, alpha 3 0.0335125
CEMIP cell migration inducing protein, hyaluronan binding 0.0334285
KIAA1217 KIAA1217 0.032709
TPT1 tumor protein, translationally-controlled 1 0.0325643
PDLIM5 PDZ and LIM domain 5 0.0321167
IQGAP1 IQ motif containing GTPase activating protein 1 0.0310739
SAMD4A sterile alpha motif domain containing 4A 0.0310599
BZW1 basic leucine zipper and W2 domains 1 0.0306748
SLC38A2 solute carrier family 38, member 2 0.0301886
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0296746
ZSWIM6 zinc finger, SWIM-type containing 6 0.0292878
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0292777
INTS6 integrator complex subunit 6 0.0281807
FMNL2 formin-like 2 0.0281771
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0279782
EEF2 eukaryotic translation elongation factor 2 0.0279563
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0277278
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0276878
SMAD3 SMAD family member 3 0.0276113
GOLGB1 golgin B1 0.0275577
NRIP1 nuclear receptor interacting protein 1 0.0263561
FSTL1 follistatin-like 1 0.026199
LPP LIM domain containing preferred translocation partner in lipoma 0.0261879
ARHGAP22 Rho GTPase activating protein 22 0.0261498
TLN1 talin 1 0.0253559
PKM pyruvate kinase, muscle 0.0251404
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0250797
PRELID2 PRELI domain containing 2 0.0250238
NABP1 nucleic acid binding protein 1 0.0249869
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0249248
EGFR epidermal growth factor receptor 0.0248713
GLRX glutaredoxin (thioltransferase) 0.0246598
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0246107
MYH9 myosin, heavy chain 9, non-muscle 0.0244256
SERINC1 serine incorporator 1 0.0244125
PHF3 PHD finger protein 3 0.0241986
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0241744
SFTPA2 surfactant protein A2 0.0241453
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0241449
FAT1 FAT atypical cadherin 1 0.0240163
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0234725
MYO1D myosin ID 0.0231607
TOP1 topoisomerase (DNA) I 0.0231465
C3ORF52 chromosome 3 open reading frame 52 0.0228986
STC2 stanniocalcin 2 0.0225909
RAB31 RAB31, member RAS oncogene family 0.0225334
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0222442
ADIPOR2 adiponectin receptor 2 0.0221786
ANO6 anoctamin 6 0.0220076
CLIP2 CAP-GLY domain containing linker protein 2 0.0218763
TPR translocated promoter region, nuclear basket protein 0.0217499
IER3 immediate early response 3 0.0217354

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.175099
OXR1 oxidation resistance 1 -0.151747
PRKG1 protein kinase, cGMP-dependent, type I -0.149898
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.137572
ADGRB3 adhesion G protein-coupled receptor B3 -0.101543
COL6A1 collagen, type VI, alpha 1 -0.0963913
AKAP12 A kinase (PRKA) anchor protein 12 -0.0954757
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0833989
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0820026
FAM13A family with sequence similarity 13, member A -0.0756397
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 -0.0729048
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0653599
ATP13A3 ATPase type 13A3 -0.0636391
TMEM165 transmembrane protein 165 -0.0560782
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0548386
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0532091
TMSB10 thymosin beta 10 -0.0527507
GOLGA4 golgin A4 -0.0512954
FRMPD4 FERM and PDZ domain containing 4 -0.0504026
MYO10 myosin X -0.0501067
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0426237
PRRX1 paired related homeobox 1 -0.0421314
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0416988
MMP12 matrix metallopeptidase 12 -0.0401127
COL1A1 collagen, type I, alpha 1 -0.0398007
CLMP CXADR-like membrane protein -0.039519
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0388217
MEIS1 Meis homeobox 1 -0.0380648
ZEB1 zinc finger E-box binding homeobox 1 -0.0375388
GPHN gephyrin -0.0366697
CDH13 cadherin 13 -0.0359866
HIPK2 homeodomain interacting protein kinase 2 -0.035347
DDR2 discoidin domain receptor tyrosine kinase 2 -0.0348874
ABI3BP ABI family, member 3 (NESH) binding protein -0.0346248
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0343861
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.033974
COL8A1 collagen, type VIII, alpha 1 -0.0339075
PDE8A phosphodiesterase 8A -0.033354
ITGA1 integrin, alpha 1 -0.0325455
PTPRG protein tyrosine phosphatase, receptor type, G -0.0325328
USP3 ubiquitin specific peptidase 3 -0.0317425
RAB6A RAB6A, member RAS oncogene family -0.0314768
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.031469
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0310669
NDRG1 N-myc downstream regulated 1 -0.0303391
MAP4 microtubule-associated protein 4 -0.0300173
LCORL ligand dependent nuclear receptor corepressor-like -0.0299389
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0298127
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0295869
VCAN versican -0.0287645
COL1A2 collagen, type I, alpha 2 -0.0285234
SBF2 SET binding factor 2 -0.0284016
AFF3 AF4/FMR2 family, member 3 -0.0280551
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0274334
GLI2 GLI family zinc finger 2 -0.0269055
S100A6 S100 calcium binding protein A6 -0.0268707
BIRC6 baculoviral IAP repeat containing 6 -0.0264894
ZFPM2 zinc finger protein, FOG family member 2 -0.0263039
NPTX1 neuronal pentraxin I -0.0262582
PLPP3 phospholipid phosphatase 3 -0.0262236
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0260652
PCDH9 protocadherin 9 -0.0259796
ARHGAP10 Rho GTPase activating protein 10 -0.0258702
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) -0.0255459
LIMCH1 LIM and calponin homology domains 1 -0.0252724
HHIP hedgehog interacting protein -0.0252651
IARS1 isoleucyl-tRNA synthetase 1 -0.0252576
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0252342
MON2 MON2 homolog (S. cerevisiae) -0.0251783
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.0247008
PFN1 profilin 1 -0.0246917
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) -0.0243177
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0243153
ADAM9 ADAM metallopeptidase domain 9 -0.0240508
CCDC102B coiled-coil domain containing 102B -0.0240208
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.023844
GARS1 glycyl-tRNA synthetase 1 -0.0235801
ANO10 anoctamin 10 -0.0233577
EBF1 early B-cell factor 1 -0.0233011
COL5A3 collagen, type V, alpha 3 -0.0231382
WSB1 WD repeat and SOCS box containing 1 -0.0230816
SASH1 SAM and SH3 domain containing 1 -0.0230485
DLC1 DLC1 Rho GTPase activating protein -0.0229562
FTL ferritin, light polypeptide -0.0228637
TRPC4 transient receptor potential cation channel, subfamily C, member 4 -0.0223499
ESYT2 extended synaptotagmin-like protein 2 -0.0223234
WNT5A wingless-type MMTV integration site family, member 5A -0.0222375
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0222327
PTMA prothymosin, alpha -0.0221839
TENM3 teneurin transmembrane protein 3 -0.0221734
RNF145 ring finger protein 145 -0.022156
BNC2 basonuclin 2 -0.0220758
ZEB2 zinc finger E-box binding homeobox 2 -0.0219778
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.021971
RAI14 retinoic acid induced 14 -0.0216787
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0216421
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0215648
PRSS23 protease, serine, 23 -0.0214339
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0214168
RPS23 ribosomal protein S23 -0.0212945