GI1 Gene Set

Dataset CCLE Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
Description A immortal human brain-derived cell line cell that has the characteristics: Human glioma separated from gliosarcoma. (Cell Line Ontology, CLO_0050634)
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Genes

213 genes with high or low expression in GI1 relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
LOC100507530 3.40795
LOC285593 uncharacterized LOC285593 2.90248
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 2.76921
ZZZ3 zinc finger, ZZ-type containing 3 2.76849
MYSM1 Myb-like, SWIRM and MPN domains 1 2.74567
SNUPN snurportin 1 2.61413
PIGK phosphatidylinositol glycan anchor biosynthesis, class K 2.58923
ANKRD50 ankyrin repeat domain 50 2.52388
TP53BP1 tumor protein p53 binding protein 1 2.46358
HHIPL2 HHIP-like 2 2.37735
NT5DC2 5'-nucleotidase domain containing 2 2.37284
SCN10A sodium channel, voltage gated, type X alpha subunit 2.32445
SCARA3 scavenger receptor class A, member 3 2.29342
PTPN9 protein tyrosine phosphatase, non-receptor type 9 2.24148
OMA1 OMA1 zinc metallopeptidase 2.20609
MORF4L1 mortality factor 4 like 1 2.11929
APCDD1L adenomatosis polyposis coli down-regulated 1-like 2.11097
SLC22A3 solute carrier family 22 (organic cation transporter), member 3 2.09216
METTL21C methyltransferase like 21C 2.08026
CRABP2 cellular retinoic acid binding protein 2 2.05778
MEIS2 Meis homeobox 2 2.04374
LOC100130111 uncharacterized LOC100130111 1.97391
TRIP13 thyroid hormone receptor interactor 13 1.9699
SUGT1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 1.96597
WNT10B wingless-type MMTV integration site family, member 10B 1.94814
ASPG asparaginase 1.92068
RXFP3 relaxin/insulin-like family peptide receptor 3 1.90014
CAMK2A calcium/calmodulin-dependent protein kinase II alpha 1.89983
SPACA1 sperm acrosome associated 1 1.89701
RFX1 regulatory factor X, 1 (influences HLA class II expression) 1.88257
KRT38 keratin 38, type I 1.87765
SLC22A8 solute carrier family 22 (organic anion transporter), member 8 1.86552
LINC01599 long intergenic non-protein coding RNA 1599 1.86352
GUCY1A2 guanylate cyclase 1, soluble, alpha 2 1.86116
ARSI arylsulfatase family, member I 1.84581
MGC15885 uncharacterized protein MGC15885 1.83276
JUN jun proto-oncogene 1.82975
LOC100507461 uncharacterized LOC100507461 1.82693
PLD3 phospholipase D family, member 3 1.80511
ASB5 ankyrin repeat and SOCS box containing 5 1.79973
MGC24103 uncharacterized MGC24103 1.78718
PCOLCE procollagen C-endopeptidase enhancer 1.77298
PCDHGB7 protocadherin gamma subfamily B, 7 1.76668
CDK15 cyclin-dependent kinase 15 1.76483
ADCY8 adenylate cyclase 8 (brain) 1.7545
ZNF804B zinc finger protein 804B 1.74179
NMBR neuromedin B receptor 1.73638
BRD7P3 bromodomain containing 7 pseudogene 3 1.71244
MXRA5 matrix-remodelling associated 5 1.71119
PSMA4 proteasome (prosome, macropain) subunit, alpha type, 4 1.69798
C20ORF173 chromosome 20 open reading frame 173 1.69503
MATN2 matrilin 2 1.69379
C8ORF59 chromosome 8 open reading frame 59 1.69208
BAALC brain and acute leukemia, cytoplasmic 1.68724
LOC100129476 uncharacterized LOC100129476 1.68653
HIPK4 homeodomain interacting protein kinase 4 1.67586
WFDC6 WAP four-disulfide core domain 6 1.67565
OLFML3 olfactomedin-like 3 1.66669
SPEG SPEG complex locus 1.6622
C11ORF84 chromosome 11 open reading frame 84 1.66094
KCNK13 potassium channel, two pore domain subfamily K, member 13 1.65718
UBE2V2 ubiquitin-conjugating enzyme E2 variant 2 1.65427
TRIM55 tripartite motif containing 55 1.64129
FAM198B family with sequence similarity 198, member B 1.63505
MS4A15 membrane-spanning 4-domains, subfamily A, member 15 1.62764
TWIST1 twist family bHLH transcription factor 1 1.62618
PXT1 peroxisomal, testis specific 1 1.62395
FRMD4A FERM domain containing 4A 1.61921
ADRB3 adrenoceptor beta 3 1.61572
CCIN calicin 1.61555
HOXA5 homeobox A5 1.60711
HOXA2 homeobox A2 1.60081
PSD3 pleckstrin and Sec7 domain containing 3 1.59963
TRAV17 T cell receptor alpha variable 17 1.59584
COL3A1 collagen, type III, alpha 1 1.58825
LOC100507534 uncharacterized LOC100507534 1.58262
COLEC12 collectin sub-family member 12 1.5691
PGK2 phosphoglycerate kinase 2 1.56856
LOC157273 uncharacterized LOC157273 1.56835
FLJ32790 1.56683
KLHL4 kelch-like family member 4 1.56126
DES desmin 1.55184
IMPG2 interphotoreceptor matrix proteoglycan 2 1.54999
LINC01561 long intergenic non-protein coding RNA 1561 1.53875
BDKRB1 bradykinin receptor B1 1.52944
ZFHX4 zinc finger homeobox 4 1.52355
HECW1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 1.51608
HOXB2 homeobox B2 1.51478
SLC22A1 solute carrier family 22 (organic cation transporter), member 1 1.50819
GORAB golgin, RAB6-interacting 1.50602
PSMC3IP PSMC3 interacting protein 1.50599
LOC51145 uncharacterized LOC51145 1.50425
FGGY FGGY carbohydrate kinase domain containing 1.49686
WNT3 wingless-type MMTV integration site family, member 3 1.49516
HTR7 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled 1.4941
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 1.4938
FAM205BP transmembrane protein C9orf144B pseudogene 1.48349
PTK7 protein tyrosine kinase 7 (inactive) 1.47848
BNC2 basonuclin 2 1.4779
PYGM phosphorylase, glycogen, muscle 1.4738
LOC100506016 uncharacterized LOC100506016 1.46597
DDI1 DNA-damage inducible 1 homolog 1 (S. cerevisiae) 1.45459
C7ORF69 chromosome 7 open reading frame 69 1.45431
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 1.45341
LINC00162 long intergenic non-protein coding RNA 162 1.45298
MYBPH myosin binding protein H 1.45207
FLRT2 fibronectin leucine rich transmembrane protein 2 1.45091
POLR2J polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa 1.44914
PAGE1 P antigen family, member 1 (prostate associated) 1.44769
FERD3L Fer3-like bHLH transcription factor 1.44739
C20ORF85 chromosome 20 open reading frame 85 1.44493
NEFL neurofilament, light polypeptide 1.44344
CXORF36 chromosome X open reading frame 36 1.4391
TAF6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 1.43702
FBP2 fructose-1,6-bisphosphatase 2 1.43686
NCS1 neuronal calcium sensor 1 1.43659
GSK3A glycogen synthase kinase 3 alpha 1.43254
GIP gastric inhibitory polypeptide 1.42623
MOV10L1 Mov10 RISC complex RNA helicase like 1 1.42004
MSC musculin 1.41621
GPALPP1 GPALPP motifs containing 1 1.41546
LINC00551 long intergenic non-protein coding RNA 551 1.41412
CACNG1 calcium channel, voltage-dependent, gamma subunit 1 1.41289
KANK4 KN motif and ankyrin repeat domains 4 1.409
ZNF70 zinc finger protein 70 1.40138
ZMAT4 zinc finger, matrin-type 4 1.40094
IL21 interleukin 21 1.39865
TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae) 1.39474
NNAT neuronatin 1.3914
CBLB Cbl proto-oncogene B, E3 ubiquitin protein ligase 1.38744
ENKUR enkurin, TRPC channel interacting protein 1.38651
MRGPRX2 MAS-related GPR, member X2 1.38495
ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 1.38442
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3 1.38309
ARMCX4 armadillo repeat containing, X-linked 4 1.38151
GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa 1.3811
LOC285768 uncharacterized LOC285768 1.37927
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 1.37218
PRCD progressive rod-cone degeneration 1.36936
ZBTB12 zinc finger and BTB domain containing 12 1.36606
PHOX2A paired-like homeobox 2a 1.36397
MFAP1 microfibrillar-associated protein 1 1.36164
LOC728084 uncharacterized LOC728084 1.36135
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 1.36107
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme 1.35822
HSPB7 heat shock 27kDa protein family, member 7 (cardiovascular) 1.35618
REG1P regenerating islet-derived 1 pseudogene 1.35376
ZNF843 zinc finger protein 843 1.3492

low expression

Symbol Name Standardized Value
DKFZP586I1420 uncharacterized protein DKFZp586I1420 -2.98749
SRSF8 serine/arginine-rich splicing factor 8 -2.80869
ZBTB44 zinc finger and BTB domain containing 44 -2.50267
ZNRF2 zinc and ring finger 2, E3 ubiquitin protein ligase -2.4206
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase -2.35837
GPR25 G protein-coupled receptor 25 -2.21758
PPTC7 PTC7 protein phosphatase homolog (S. cerevisiae) -2.18031
CBX7 chromobox homolog 7 -2.16525
LARP1B La ribonucleoprotein domain family, member 1B -2.15399
SEPSECS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase -2.08939
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -2.07969
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4 -2.03823
RNF141 ring finger protein 141 -1.9746
MIR205HG MIR205 host gene -1.89177
OTUD1 OTU deubiquitinase 1 -1.88045
C14ORF169 chromosome 14 open reading frame 169 -1.84846
MIF4GD MIF4G domain containing -1.83193
AGTPBP1 ATP/GTP binding protein 1 -1.8313
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -1.8252
AFTPH aftiphilin -1.82082
RNF103 ring finger protein 103 -1.80008
PPP1R13B protein phosphatase 1, regulatory subunit 13B -1.76403
SDHAF3 succinate dehydrogenase complex assembly factor 3 -1.74501
PSMB9 proteasome (prosome, macropain) subunit, beta type, 9 -1.73703
CATSPER3 cation channel, sperm associated 3 -1.73702
ERVW-1 endogenous retrovirus group W, member 1 -1.72771
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae) -1.72221
BRAP BRCA1 associated protein -1.69824
PDCD6 programmed cell death 6 -1.69667
DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 -1.67164
TMEM129 transmembrane protein 129, E3 ubiquitin protein ligase -1.66885
PNP purine nucleoside phosphorylase -1.66612
PKP4 plakophilin 4 -1.65118
BST1 bone marrow stromal cell antigen 1 -1.64808
ZFP36L2 ZFP36 ring finger protein-like 2 -1.63713
PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 -1.63335
SCGB2A2 secretoglobin, family 2A, member 2 -1.63
CACNG7 calcium channel, voltage-dependent, gamma subunit 7 -1.62973
KDM3A lysine (K)-specific demethylase 3A -1.61076
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 -1.60871
NSUN4 NOP2/Sun domain family, member 4 -1.60841
DUSP22 dual specificity phosphatase 22 -1.60374
SYNGR2 synaptogyrin 2 -1.60331
PODXL podocalyxin-like -1.60103
GPBP1L1 GC-rich promoter binding protein 1-like 1 -1.59188
CNOT11 CCR4-NOT transcription complex, subunit 11 -1.58554
NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 -1.58025
ZNF274 zinc finger protein 274 -1.56923
DHH desert hedgehog -1.56463
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 -1.55964
KIAA1147 KIAA1147 -1.55946
C14ORF105 chromosome 14 open reading frame 105 -1.55476
WDR31 WD repeat domain 31 -1.55208
SLC48A1 solute carrier family 48 (heme transporter), member 1 -1.53828
MKNK1 MAP kinase interacting serine/threonine kinase 1 -1.52491
GMDS GDP-mannose 4,6-dehydratase -1.52251
APLP2 amyloid beta (A4) precursor-like protein 2 -1.5124
ARRDC1 arrestin domain containing 1 -1.50453
MIR205 microRNA 205 -1.48888
LRRC8D leucine rich repeat containing 8 family, member D -1.48716
MKNK2 MAP kinase interacting serine/threonine kinase 2 -1.48535
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha -1.48516
CHRNB4 cholinergic receptor, nicotinic, beta 4 (neuronal) -1.48196
PURA purine-rich element binding protein A -1.47367
TMEM156 transmembrane protein 156 -1.46864