GSK1059615_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description GSK1059615 perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the GSK1059615_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.292413
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.051695
AKAP12 A kinase (PRKA) anchor protein 12 0.0477576
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0412199
GRB10 growth factor receptor-bound protein 10 0.0346391
GPC5 glypican 5 0.0336365
GOLGB1 golgin B1 0.0323734
IGFBP1 insulin-like growth factor binding protein 1 0.0313594
VCAN versican 0.0295414
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0284667
MCL1 myeloid cell leukemia 1 0.0268142
SQSTM1 sequestosome 1 0.0265632
GLIS3 GLIS family zinc finger 3 0.0262876
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0242928
RAI14 retinoic acid induced 14 0.024208
CHD9 chromodomain helicase DNA binding protein 9 0.0240558
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0228341
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0223076
BRD2 bromodomain containing 2 0.0221556
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0214593
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0213039
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0212975
CLIC4 chloride intracellular channel 4 0.021198
INTS6 integrator complex subunit 6 0.0208039
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0206474
ZNF638 zinc finger protein 638 0.0200695
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0194694
PCBP2 poly(rC) binding protein 2 0.0194503
KAZN kazrin, periplakin interacting protein 0.0193623
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0185414
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0182574
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0182571
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0178039
PLIN2 perilipin 2 0.0176395
RPL37 ribosomal protein L37 0.0173868
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0172449
PDLIM5 PDZ and LIM domain 5 0.0169687
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0167946
EIF5 eukaryotic translation initiation factor 5 0.0166975
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.016193
ATF4 activating transcription factor 4 0.015809
NFE2L1 nuclear factor, erythroid 2-like 1 0.0155398
WWOX WW domain containing oxidoreductase 0.015406
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 0.0153796
CANX calnexin 0.0152182
NEB nebulin 0.0150712
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0149855
C6ORF62 chromosome 6 open reading frame 62 0.0148913
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0146697
N4BP2L2 NEDD4 binding protein 2-like 2 0.0146692
RNF213 ring finger protein 213 0.0146644
FST follistatin 0.0145252
ANKRD11 ankyrin repeat domain 11 0.014233
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0140019
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0137325
SFPQ splicing factor proline/glutamine-rich 0.0137175
HM13 histocompatibility (minor) 13 0.0135608
ZSWIM6 zinc finger, SWIM-type containing 6 0.0134947
EIF4B eukaryotic translation initiation factor 4B 0.013401
BMERB1 bMERB domain containing 1 0.0133536
USP34 ubiquitin specific peptidase 34 0.0131194
IARS1 isoleucyl-tRNA synthetase 1 0.0131083
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0130191
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 0.0129818
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0129529
ATF3 activating transcription factor 3 0.0127972
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0126351
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0126146
ADIPOR2 adiponectin receptor 2 0.0124575
HSPA8 heat shock 70kDa protein 8 0.0124423
SREBF2 sterol regulatory element binding transcription factor 2 0.0124337
GCLC glutamate-cysteine ligase, catalytic subunit 0.0124048
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.0123928
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0123887
TIAM2 T-cell lymphoma invasion and metastasis 2 0.0123654
SPDYA speedy/RINGO cell cycle regulator family member A 0.0121382
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.0120588
KLRD1 killer cell lectin-like receptor subfamily D, member 1 0.0119717
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0118395
RPS2 ribosomal protein S2 0.0117561
FAM13A family with sequence similarity 13, member A 0.0115441
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.011531
PIEZO2 piezo-type mechanosensitive ion channel component 2 0.0115174
BTG1 B-cell translocation gene 1, anti-proliferative 0.0115004
BIRC6 baculoviral IAP repeat containing 6 0.0114456
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0114093
BTBD9 BTB (POZ) domain containing 9 0.0114049
SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G 0.0113856
ACSL1 acyl-CoA synthetase long-chain family member 1 0.0113507
AKAP9 A kinase (PRKA) anchor protein 9 0.0112535
SPIRE1 spire-type actin nucleation factor 1 0.0110524
TRIB3 tribbles pseudokinase 3 0.0109607
BCAS3 breast carcinoma amplified sequence 3 0.0109551
OPTN optineurin 0.0109288
XPOT exportin, tRNA 0.0109247
CDK13 cyclin-dependent kinase 13 0.0109189
KAT6B K(lysine) acetyltransferase 6B 0.0109021
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0108789
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0108587
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 0.0108109

decreased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.311747
APOB apolipoprotein B -0.218697
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.184921
FN1 fibronectin 1 -0.176496
C3 complement component 3 -0.112028
ERRFI1 ERBB receptor feedback inhibitor 1 -0.102083
MT2A metallothionein 2A -0.0817533
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0780563
GPC6 glypican 6 -0.0768145
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0752023
GPC3 glypican 3 -0.073265
SLC38A2 solute carrier family 38, member 2 -0.073038
EHBP1 EH domain binding protein 1 -0.0645913
A2M alpha-2-macroglobulin -0.0614099
ELL2 elongation factor, RNA polymerase II, 2 -0.0608412
LRMDA leucine rich melanocyte differentiation associated -0.0604757
TRIM26 tripartite motif containing 26 -0.0599663
DLC1 DLC1 Rho GTPase activating protein -0.0569813
TM4SF1 transmembrane 4 L six family member 1 -0.0541985
FBF1 Fas (TNFRSF6) binding factor 1 -0.0532664
MAML2 mastermind-like 2 (Drosophila) -0.0532065
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0511981
NPAS2 neuronal PAS domain protein 2 -0.0488362
DSPP dentin sialophosphoprotein -0.0470915
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0459538
DOCK4 dedicator of cytokinesis 4 -0.0459035
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0451929
TMEM123 transmembrane protein 123 -0.0440043
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0432276
NKD1 naked cuticle homolog 1 (Drosophila) -0.0427306
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0407093
FNDC3B fibronectin type III domain containing 3B -0.0385915
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0384255
EML4 echinoderm microtubule associated protein like 4 -0.0383819
SDC4 syndecan 4 -0.0378672
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0372611
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0364053
TPT1 tumor protein, translationally-controlled 1 -0.0363241
GMDS GDP-mannose 4,6-dehydratase -0.0342905
MALT1 MALT1 paracaspase -0.0339799
CFB complement factor B -0.0338416
ZMYND8 zinc finger, MYND-type containing 8 -0.0337453
APOA2 apolipoprotein A-II -0.0333539
VCL vinculin -0.0327753
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0314443
CCL20 chemokine (C-C motif) ligand 20 -0.0303367
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 -0.0300952
BCL2L1 BCL2-like 1 -0.0300434
ABTB3 ankyrin repeat and BTB domain containing 3 -0.0297487
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0296891
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0296165
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0292267
RRBP1 ribosome binding protein 1 -0.0290306
ARHGAP9 Rho GTPase activating protein 9 -0.0289941
SESTD1 SEC14 and spectrin domains 1 -0.0284375
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0281391
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0278993
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0274754
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0270068
EPAS1 endothelial PAS domain protein 1 -0.0265211
MBNL3 muscleblind-like splicing regulator 3 -0.0264597
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0263039
LMCD1 LIM and cysteine-rich domains 1 -0.0261385
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0260715
PEG10 paternally expressed 10 -0.0258743
FRMD5 FERM domain containing 5 -0.0256171
RPS24 ribosomal protein S24 -0.0254721
ACTN4 actinin, alpha 4 -0.0254698
OSMR oncostatin M receptor -0.0254647
ENO1 enolase 1, (alpha) -0.0249218
RPL11 ribosomal protein L11 -0.0246551
SOX5 SRY (sex determining region Y)-box 5 -0.0246349
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0240996
DENND4A DENN/MADD domain containing 4A -0.0240543
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0236674
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0234884
LYZ lysozyme -0.0231287
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0228329
LOC112694756 uncharaterized LOC112694756 -0.0227564
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0224434
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0224349
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0221855
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 -0.0221828
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0221341
CPE carboxypeptidase E -0.0219004
APOE apolipoprotein E -0.021473
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0210726
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0210277
TM9SF3 transmembrane 9 superfamily member 3 -0.0210256
EGR1 early growth response 1 -0.0208783
FAM135A family with sequence similarity 135, member A -0.0208556
DST dystonin -0.0208038
PEG3 paternally expressed 3 -0.020789
RPS19 ribosomal protein S19 -0.0206152
ADGRG6 adhesion G protein-coupled receptor G6 -0.0205956
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.020426
FILIP1L filamin A interacting protein 1-like -0.0203035
APOA1 apolipoprotein A-I -0.0199857
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0198906
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0197382