Gemcitabine_NCI-H1792 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Gemcitabine perturbation in NCI-H1792 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Gemcitabine_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.134587
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.128622
SMAD3 SMAD family member 3 0.126863
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.115562
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.103601
PCBP2 poly(rC) binding protein 2 0.102553
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) 0.0987094
HIPK2 homeodomain interacting protein kinase 2 0.0919782
ECE1 endothelin converting enzyme 1 0.0817973
RUNX2 runt-related transcription factor 2 0.0786926
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0785068
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.075761
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0738352
GRB10 growth factor receptor-bound protein 10 0.0722985
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0717092
ZSWIM6 zinc finger, SWIM-type containing 6 0.0689692
CXCL8 chemokine (C-X-C motif) ligand 8 0.0646807
EREG epiregulin 0.0635108
FAM107B family with sequence similarity 107, member B 0.0617857
SEPTIN9 septin 9 0.0604253
APLP2 amyloid beta (A4) precursor-like protein 2 0.0579461
AHRR aryl-hydrocarbon receptor repressor 0.0569699
ENO1 enolase 1, (alpha) 0.0568373
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0561285
B2M beta-2-microglobulin 0.0535058
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.053494
LDHA lactate dehydrogenase A 0.0534475
SOD2 superoxide dismutase 2, mitochondrial 0.0529617
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.052882
LPP LIM domain containing preferred translocation partner in lipoma 0.051735
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0512295
ZNF638 zinc finger protein 638 0.051007
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0503212
MYO10 myosin X 0.0484872
ATXN10 ataxin 10 0.0481744
PKM pyruvate kinase, muscle 0.0479983
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0474188
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0464046
USP34 ubiquitin specific peptidase 34 0.0457337
WLS wntless Wnt ligand secretion mediator 0.0456994
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0454797
TPST1 tyrosylprotein sulfotransferase 1 0.0454194
EXT1 exostosin glycosyltransferase 1 0.0453789
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0446881
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0442279
JARID2 jumonji, AT rich interactive domain 2 0.0431118
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0431062
SQSTM1 sequestosome 1 0.043102
VEGFA vascular endothelial growth factor A 0.0425888
NAV2 neuron navigator 2 0.0421429
GLS2 glutaminase 2 (liver, mitochondrial) 0.0420758
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0420287
MB21D2 Mab-21 domain containing 2 0.0419077
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0418448
WNT7B wingless-type MMTV integration site family, member 7B 0.0416031
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.040354
IFI44L interferon-induced protein 44-like 0.0402965
LRMDA leucine rich melanocyte differentiation associated 0.0394147
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.038981
LOXL2 lysyl oxidase-like 2 0.0380923
ZFP91 ZFP91 zinc finger protein 0.0372982
NPAS2 neuronal PAS domain protein 2 0.0370971
ALCAM activated leukocyte cell adhesion molecule 0.0370753
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0367452
ALDH1A3 aldehyde dehydrogenase 1 family, member A3 0.036732
CA12 carbonic anhydrase XII 0.0364936
PABPC1 poly(A) binding protein, cytoplasmic 1 0.036318
SRRM2 serine/arginine repetitive matrix 2 0.0361407
ATXN1 ataxin 1 0.0353853
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0348816
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 0.0348637
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0348616
EEF2 eukaryotic translation elongation factor 2 0.0345709
RPTOR regulatory associated protein of MTOR, complex 1 0.0343416
STC1 stanniocalcin 1 0.0342861
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0341039
ADAMTS14 ADAM metallopeptidase with thrombospondin type 1 motif, 14 0.0339022
ANO6 anoctamin 6 0.0334988
KDM2A lysine (K)-specific demethylase 2A 0.0333169
INTS6 integrator complex subunit 6 0.0329102
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0325976
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.032595
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0325521
ADM adrenomedullin 0.031865
RORA RAR-related orphan receptor A 0.0318086
BIRC3 baculoviral IAP repeat containing 3 0.0317501
CCSER1 coiled-coil serine-rich protein 1 0.031627
EGFR epidermal growth factor receptor 0.0315672
COPA coatomer protein complex, subunit alpha 0.031532
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0309995
MEIS2 Meis homeobox 2 0.0309897
GPATCH2L G patch domain containing 2-like 0.0309496
RAI14 retinoic acid induced 14 0.030945
SYNJ2 synaptojanin 2 0.0301903
SFTPA2 surfactant protein A2 0.0300763
FER fer (fps/fes related) tyrosine kinase 0.0298313
RDH10 retinol dehydrogenase 10 (all-trans) 0.0297205
TXNRD1 thioredoxin reductase 1 0.0296872
LGALS12 lectin, galactoside-binding, soluble, 12 0.0290114
CADPS2 Ca++-dependent secretion activator 2 0.0285714

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.188138
NAMPT nicotinamide phosphoribosyltransferase -0.166964
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.138163
SDK1 sidekick cell adhesion molecule 1 -0.116042
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0902358
IGFBP3 insulin-like growth factor binding protein 3 -0.087387
PTMA prothymosin, alpha -0.0814432
RBM39 RNA binding motif protein 39 -0.0794861
PDE4D phosphodiesterase 4D, cAMP-specific -0.0784848
FN1 fibronectin 1 -0.0781374
ZMYND8 zinc finger, MYND-type containing 8 -0.0759798
LOX lysyl oxidase -0.0734677
GLCCI1 glucocorticoid induced 1 -0.0733525
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0726315
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0702111
OSMR oncostatin M receptor -0.0694346
HMGA2 high mobility group AT-hook 2 -0.0688394
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0662938
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0620665
GPC6 glypican 6 -0.0598684
FAM20C family with sequence similarity 20, member C -0.0560551
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0552689
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0542476
RPLP1 ribosomal protein, large, P1 -0.0536476
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0533499
ELL2 elongation factor, RNA polymerase II, 2 -0.0511937
RAP1B RAP1B, member of RAS oncogene family -0.0511167
ZNF804A zinc finger protein 804A -0.0505724
OXR1 oxidation resistance 1 -0.050151
NCOA7 nuclear receptor coactivator 7 -0.0469786
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0468545
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0462319
ANTXR2 anthrax toxin receptor 2 -0.0451986
NPC1 Niemann-Pick disease, type C1 -0.0450427
RPS21 ribosomal protein S21 -0.0431326
RPL35A ribosomal protein L35a -0.0423408
GNAS GNAS complex locus -0.0423279
RPS19 ribosomal protein S19 -0.0414099
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0412588
PRELID2 PRELI domain containing 2 -0.0405142
VCL vinculin -0.0401602
CDH13 cadherin 13 -0.0393997
BASP1 brain abundant, membrane attached signal protein 1 -0.038682
GLIS3 GLIS family zinc finger 3 -0.038658
NDRG1 N-myc downstream regulated 1 -0.0381482
PRRX1 paired related homeobox 1 -0.0369521
OGA O-GlcNAcase -0.036849
DLG1 discs, large homolog 1 (Drosophila) -0.0367741
TNNC1 troponin C type 1 (slow) -0.0363212
LMAN1 lectin, mannose-binding, 1 -0.0358551
MTSS1 metastasis suppressor 1 -0.0357257
FTL ferritin, light polypeptide -0.035404
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.035316
RAB27B RAB27B, member RAS oncogene family -0.0348131
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0345477
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0340804
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0335332
AHNAK AHNAK nucleoprotein -0.0334807
ABCA6 ATP-binding cassette, sub-family A (ABC1), member 6 -0.0330727
RPL36 ribosomal protein L36 -0.0327279
RAI1 retinoic acid induced 1 -0.0319367
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0315439
ZEB2 zinc finger E-box binding homeobox 2 -0.0310526
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0310148
RPL34 ribosomal protein L34 -0.0303878
KLF6 Kruppel-like factor 6 -0.0303627
CDK17 cyclin-dependent kinase 17 -0.0300015
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0298813
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0291447
DPYD dihydropyrimidine dehydrogenase -0.0289701
ANXA2 annexin A2 -0.02894
AKAP12 A kinase (PRKA) anchor protein 12 -0.0288494
TM4SF1 transmembrane 4 L six family member 1 -0.0286372
ARHGAP5 Rho GTPase activating protein 5 -0.0286201
KCTD16 potassium channel tetramerization domain containing 16 -0.0284604
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0284567
HAS2 hyaluronan synthase 2 -0.0280905
TMSB4X thymosin beta 4, X-linked -0.0279755
RNF24 ring finger protein 24 -0.0278031
JMJD1C jumonji domain containing 1C -0.0270109
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0266208
DAAM1 dishevelled associated activator of morphogenesis 1 -0.0265319
TMTC1 transmembrane and tetratricopeptide repeat containing 1 -0.0262974
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.025706
EIF5B eukaryotic translation initiation factor 5B -0.0256721
MARCKS myristoylated alanine-rich protein kinase C substrate -0.025651
SLC38A1 solute carrier family 38, member 1 -0.0256468
CD44 CD44 molecule (Indian blood group) -0.0255811
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0254735
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0254455
RPL38 ribosomal protein L38 -0.0253394
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.0251571
TRPS1 trichorhinophalangeal syndrome I -0.0250969
OFD1 oral-facial-digital syndrome 1 -0.0250261
VIM vimentin -0.02491
NUMB numb homolog (Drosophila) -0.0248886
FDPS farnesyl diphosphate synthase -0.0247019
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0245518
MT2A metallothionein 2A -0.0245111
STRN3 striatin, calmodulin binding protein 3 -0.024268