Gemfibrozil_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Gemfibrozil perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Gemfibrozil_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CDH13 cadherin 13 0.133459
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.112294
POTEF POTE ankyrin domain family, member F 0.107088
TRIO trio Rho guanine nucleotide exchange factor 0.10105
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0935266
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0857299
HDAC9 histone deacetylase 9 0.0841681
PRELID2 PRELI domain containing 2 0.0775123
FNDC3B fibronectin type III domain containing 3B 0.076741
INTS6 integrator complex subunit 6 0.0754433
CD44 CD44 molecule (Indian blood group) 0.074883
NAV1 neuron navigator 1 0.0739263
DST dystonin 0.0734235
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0718232
MYOF myoferlin 0.0712166
VCL vinculin 0.069657
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0679469
MAP1B microtubule-associated protein 1B 0.0671442
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0667528
ASPH aspartate beta-hydroxylase 0.0613259
SLC39A11 solute carrier family 39, member 11 0.0606299
EGFR epidermal growth factor receptor 0.0602582
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.057505
MACF1 microtubule-actin crosslinking factor 1 0.0559558
PBX3 pre-B-cell leukemia homeobox 3 0.054921
SP100 SP100 nuclear antigen 0.0549125
ANKRD11 ankyrin repeat domain 11 0.053387
ZSWIM6 zinc finger, SWIM-type containing 6 0.0525268
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0500475
SQSTM1 sequestosome 1 0.0488934
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0486834
SLC38A2 solute carrier family 38, member 2 0.0485069
MBNL1 muscleblind-like splicing regulator 1 0.0481767
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0457138
FLNA filamin A, alpha 0.0450441
EFNA5 ephrin-A5 0.0442799
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0436748
TIMP2 TIMP metallopeptidase inhibitor 2 0.043196
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0430105
NAV2 neuron navigator 2 0.0419686
LDHA lactate dehydrogenase A 0.0418877
PDLIM5 PDZ and LIM domain 5 0.0418128
RIGI RNA sensor RIG-I 0.0413891
ERBIN erbb2 interacting protein 0.0412948
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0412187
GOLGB1 golgin B1 0.0407974
DOCK5 dedicator of cytokinesis 5 0.0407736
AHNAK AHNAK nucleoprotein 0.0404972
ACTG1 actin gamma 1 0.0377896
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0364379
MPRIP myosin phosphatase Rho interacting protein 0.036261
WWTR1 WW domain containing transcription regulator 1 0.0361746
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0361123
ADD1 adducin 1 (alpha) 0.035924
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 0.0357742
CDK6 cyclin-dependent kinase 6 0.0357716
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0355642
NEK7 NIMA-related kinase 7 0.0353118
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0350461
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0350361
RASAL2 RAS protein activator like 2 0.0350163
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0345983
NIBAN1 niban apoptosis regulator 1 0.0342678
PKM pyruvate kinase, muscle 0.0341383
SMYD3 SET and MYND domain containing 3 0.0339614
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0337316
RHOBTB3 Rho-related BTB domain containing 3 0.0334667
PDE4D phosphodiesterase 4D, cAMP-specific 0.0333307
VEGFA vascular endothelial growth factor A 0.0332986
COPA coatomer protein complex, subunit alpha 0.0332437
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0331281
CENPF centromere protein F, 350/400kDa 0.032278
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0321973
DIAPH3 diaphanous-related formin 3 0.0318079
NSD2 nuclear receptor binding SET domain protein 2 0.0317595
SMAD3 SMAD family member 3 0.0317452
NAP1L1 nucleosome assembly protein 1-like 1 0.0315489
MYH9 myosin, heavy chain 9, non-muscle 0.0314471
TRIP12 thyroid hormone receptor interactor 12 0.0314099
ATXN1 ataxin 1 0.0311798
LPP LIM domain containing preferred translocation partner in lipoma 0.0308289
ZNF638 zinc finger protein 638 0.030697
TENM3 teneurin transmembrane protein 3 0.0303364
IPO9 importin 9 0.0302551
DSPP dentin sialophosphoprotein 0.0301269
ANKRD36 ankyrin repeat domain 36 0.0301026
TRA2A transformer 2 alpha homolog (Drosophila) 0.0299889
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0298811
ALCAM activated leukocyte cell adhesion molecule 0.0298385
MSN moesin 0.0295241
FBXL7 F-box and leucine-rich repeat protein 7 0.0294134
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.0290862
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0290771
BPTF bromodomain PHD finger transcription factor 0.0288321
PICALM phosphatidylinositol binding clathrin assembly protein 0.028748
MED13 mediator complex subunit 13 0.0286831
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 0.0284375
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0282541
RRM2 ribonucleotide reductase M2 0.0281354
GLIS3 GLIS family zinc finger 3 0.0279846

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.290147
VIM vimentin -0.167932
TMSB10 thymosin beta 10 -0.142355
LOXL2 lysyl oxidase-like 2 -0.103727
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0963994
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.09266
THBS2 thrombospondin 2 -0.0841504
MT2A metallothionein 2A -0.0777797
FBN1 fibrillin 1 -0.0711759
DLG1 discs, large homolog 1 (Drosophila) -0.0661092
S100A6 S100 calcium binding protein A6 -0.0653764
COL3A1 collagen, type III, alpha 1 -0.0586623
ABI3BP ABI family, member 3 (NESH) binding protein -0.0581111
COL1A2 collagen, type I, alpha 2 -0.05684
HLA-B major histocompatibility complex, class I, B -0.0533625
NDRG1 N-myc downstream regulated 1 -0.0517598
LOX lysyl oxidase -0.0515823
PLAT plasminogen activator, tissue -0.0503235
ELL2 elongation factor, RNA polymerase II, 2 -0.0500258
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0473857
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0461761
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0453553
CD99 CD99 molecule -0.045215
MT1X metallothionein 1X -0.0440639
AKAP12 A kinase (PRKA) anchor protein 12 -0.0440613
SLC38A1 solute carrier family 38, member 1 -0.0415457
SOD2 superoxide dismutase 2, mitochondrial -0.0413563
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0408837
FLNB filamin B, beta -0.0370567
BHLHE40 basic helix-loop-helix family, member e40 -0.0369429
CSTB cystatin B (stefin B) -0.0368022
FN1 fibronectin 1 -0.0356957
FTH1 ferritin, heavy polypeptide 1 -0.0340442
RAI1 retinoic acid induced 1 -0.0326571
PDIA3 protein disulfide isomerase family A, member 3 -0.0315634
MEIS2 Meis homeobox 2 -0.0302766
LOC112694756 uncharaterized LOC112694756 -0.0297426
KDM3A lysine (K)-specific demethylase 3A -0.0287414
GARS1 glycyl-tRNA synthetase 1 -0.0286345
RNF24 ring finger protein 24 -0.028152
RNF168 ring finger protein 168, E3 ubiquitin protein ligase -0.0274688
ANXA2 annexin A2 -0.0273648
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0272618
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0266688
SUCNR1 succinate receptor 1 -0.0263829
EIF1 eukaryotic translation initiation factor 1 -0.0261767
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0257566
HLA-E major histocompatibility complex, class I, E -0.0250687
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0233212
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0229101
DDIT4 DNA-damage-inducible transcript 4 -0.0224423
SBF2 SET binding factor 2 -0.0223764
LGALS1 lectin, galactoside-binding, soluble, 1 -0.021963
MXI1 MAX interactor 1, dimerization protein -0.0218752
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0218329
TM4SF1 transmembrane 4 L six family member 1 -0.0215579
UGCG UDP-glucose ceramide glucosyltransferase -0.0213401
B2M beta-2-microglobulin -0.0212369
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0212227
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1 -0.021163
MYADM myeloid-associated differentiation marker -0.02077
IFITM3 interferon induced transmembrane protein 3 -0.0206997
EPAS1 endothelial PAS domain protein 1 -0.0198507
RLF rearranged L-myc fusion -0.0198273
CTSB cathepsin B -0.0197025
PLAUR plasminogen activator, urokinase receptor -0.0196224
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0195291
NAMPT nicotinamide phosphoribosyltransferase -0.0193097
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0190378
IKBIP IKBKB interacting protein -0.0189652
S100A4 S100 calcium binding protein A4 -0.0187992
TMOD1 tropomodulin 1 -0.0187803
BSG basigin (Ok blood group) -0.0187009
S100A11 S100 calcium binding protein A11 -0.0186845
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0185984
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0180812
FTL ferritin, light polypeptide -0.0180506
INSIG1 insulin induced gene 1 -0.0180473
TMSB4X thymosin beta 4, X-linked -0.0178266
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0177931
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0177584
USP3 ubiquitin specific peptidase 3 -0.0177082
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0176668
CLU clusterin -0.0174506
S100A10 S100 calcium binding protein A10 -0.0173749
TUBB6 tubulin, beta 6 class V -0.0172334
NPEPPS aminopeptidase puromycin sensitive -0.0172286
NGLY1 N-glycanase 1 -0.0170966
ADM adrenomedullin -0.0170729
COL8A1 collagen, type VIII, alpha 1 -0.0170697
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0168943
COL5A2 collagen, type V, alpha 2 -0.0168162
FAM162A family with sequence similarity 162, member A -0.016527
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0164141
NT5E 5'-nucleotidase, ecto (CD73) -0.0163766
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0163117
FNBP4 formin binding protein 4 -0.0162321
COQ10B coenzyme Q10 homolog B (S. cerevisiae) -0.0162043
IFITM1 interferon induced transmembrane protein 1 -0.016084
RPS27 ribosomal protein S27 -0.0160698