Gemfibrozil_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Gemfibrozil perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Gemfibrozil_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.21569
SLC38A2 solute carrier family 38, member 2 0.156702
EHBP1 EH domain binding protein 1 0.10538
NKD1 naked cuticle homolog 1 (Drosophila) 0.0898537
SAMD4A sterile alpha motif domain containing 4A 0.0826925
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0802679
FAM107B family with sequence similarity 107, member B 0.0684359
DLC1 DLC1 Rho GTPase activating protein 0.0672371
APLP2 amyloid beta (A4) precursor-like protein 2 0.0659056
C3 complement component 3 0.0629454
FOXP1 forkhead box P1 0.0626159
MAML2 mastermind-like 2 (Drosophila) 0.0615696
FBF1 Fas (TNFRSF6) binding factor 1 0.0593967
DSPP dentin sialophosphoprotein 0.0592085
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0587007
CPE carboxypeptidase E 0.0584341
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0561537
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0561318
GPC3 glypican 3 0.0557453
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0550523
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0545944
TNS1 tensin 1 0.0535284
MBNL2 muscleblind-like splicing regulator 2 0.0518195
VMP1 vacuole membrane protein 1 0.0495944
OSBPL10 oxysterol binding protein-like 10 0.0456919
SVIL supervillin 0.0446234
GPC6 glypican 6 0.0435044
ZBTB20 zinc finger and BTB domain containing 20 0.0433568
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0425184
RAD51B RAD51 paralog B 0.0423152
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0414283
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0413204
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0410023
PEG10 paternally expressed 10 0.040391
GMDS GDP-mannose 4,6-dehydratase 0.0400197
DNAH17 dynein, axonemal, heavy chain 17 0.0394532
PTPRM protein tyrosine phosphatase, receptor type, M 0.0385992
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0385789
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0375525
PTCHD4 patched domain containing 4 0.0372484
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0361006
SET SET nuclear proto-oncogene 0.0358972
KDM4C lysine (K)-specific demethylase 4C 0.035439
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0353151
TNS3 tensin 3 0.0348139
VEGFA vascular endothelial growth factor A 0.034561
DOCK4 dedicator of cytokinesis 4 0.0340808
ATXN1 ataxin 1 0.0334857
UBASH3B ubiquitin associated and SH3 domain containing B 0.033159
NAP1L1 nucleosome assembly protein 1-like 1 0.0331258
CNKSR3 CNKSR family member 3 0.032992
CP ceruloplasmin (ferroxidase) 0.0328538
LMCD1 LIM and cysteine-rich domains 1 0.0326258
SEPTIN9 septin 9 0.032441
AHSG alpha-2-HS-glycoprotein 0.0323908
DST dystonin 0.0323729
ITGA1 integrin, alpha 1 0.0322994
DUSP6 dual specificity phosphatase 6 0.0316974
RIGI RNA sensor RIG-I 0.0316513
EGR1 early growth response 1 0.0314397
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0304803
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0303787
VCL vinculin 0.0303133
ASXL1 additional sex combs like transcriptional regulator 1 0.0302044
PATJ PATJ crumbs cell polarity complex component 0.0300431
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0295728
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0295447
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0294745
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0293368
ZEB1 zinc finger E-box binding homeobox 1 0.0292407
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0290843
MALRD1 MAM and LDL receptor class A domain containing 1 0.0288738
SDC2 syndecan 2 0.0286731
RIN2 Ras and Rab interactor 2 0.028389
CUL3 cullin 3 0.0279644
JAK1 Janus kinase 1 0.0276689
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.027591
MYO1E myosin IE 0.0274604
ARHGAP9 Rho GTPase activating protein 9 0.0271476
RPS3 ribosomal protein S3 0.0269997
CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 0.026804
JMJD1C jumonji domain containing 1C 0.026596
ADGRG6 adhesion G protein-coupled receptor G6 0.0265478
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0263388
NCOA2 nuclear receptor coactivator 2 0.0260068
FAT1 FAT atypical cadherin 1 0.026003
FILIP1L filamin A interacting protein 1-like 0.0259193
CRY1 cryptochrome circadian clock 1 0.0254886
COL27A1 collagen, type XXVII, alpha 1 0.0254504
GK glycerol kinase 0.025204
NSUN6 NOP2/Sun domain family, member 6 0.0248317
ADIPOR2 adiponectin receptor 2 0.0248054
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0246103
PRKCA protein kinase C, alpha 0.0243689
TBC1D22A TBC1 domain family, member 22A 0.0242142
SMAD3 SMAD family member 3 0.0241661
CADM1 cell adhesion molecule 1 0.0241556
BCL2L1 BCL2-like 1 0.0241089
WDR43 WD repeat domain 43 0.0240853
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.0240812

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.288942
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.177559
MT2A metallothionein 2A -0.119329
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0906105
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0807106
RPS6 ribosomal protein S6 -0.0746133
ELL2 elongation factor, RNA polymerase II, 2 -0.0720964
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0714199
RPLP1 ribosomal protein, large, P1 -0.0704716
RPL34 ribosomal protein L34 -0.0699899
APOA2 apolipoprotein A-II -0.0684192
CCL20 chemokine (C-C motif) ligand 20 -0.0681101
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.065186
RPL11 ribosomal protein L11 -0.0648426
TPT1 tumor protein, translationally-controlled 1 -0.063718
DTNA dystrobrevin, alpha -0.0629799
PLIN2 perilipin 2 -0.062204
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0582361
TMSB10 thymosin beta 10 -0.0580134
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0569695
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.05509
RPS19 ribosomal protein S19 -0.0539497
RPL23 ribosomal protein L23 -0.053349
SBF2 SET binding factor 2 -0.0530361
BHLHE40 basic helix-loop-helix family, member e40 -0.052887
RPL35A ribosomal protein L35a -0.0519594
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 -0.0519034
EPAS1 endothelial PAS domain protein 1 -0.0473402
AKAP12 A kinase (PRKA) anchor protein 12 -0.0467151
RPS21 ribosomal protein S21 -0.0458833
ZNF292 zinc finger protein 292 -0.045334
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0450721
RPLP0 ribosomal protein, large, P0 -0.04424
IGFBP1 insulin-like growth factor binding protein 1 -0.0441198
NDRG1 N-myc downstream regulated 1 -0.0440128
RPL12 ribosomal protein L12 -0.0435194
H1-0 H1.0 linker histone -0.0430143
RPLP2 ribosomal protein, large, P2 -0.0429964
APOE apolipoprotein E -0.0423892
S100A9 S100 calcium binding protein A9 -0.0421543
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0402648
FNDC3B fibronectin type III domain containing 3B -0.0401535
FTH1 ferritin, heavy polypeptide 1 -0.0347809
NIPBL Nipped-B homolog (Drosophila) -0.0344557
INSIG2 insulin induced gene 2 -0.0342853
LOC112694756 uncharaterized LOC112694756 -0.0340311
KRT18 keratin 18, type I -0.0340242
NUP58 nucleoporin 58 -0.0335293
RPL19 ribosomal protein L19 -0.0333095
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.032244
ARHGAP5 Rho GTPase activating protein 5 -0.0322387
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0316268
RPS14 ribosomal protein S14 -0.0314541
RPL27 ribosomal protein L27 -0.0313605
KDM3A lysine (K)-specific demethylase 3A -0.0311231
NPAS2 neuronal PAS domain protein 2 -0.0310593
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0307811
ZMYND8 zinc finger, MYND-type containing 8 -0.0304836
SRPK1 SRSF protein kinase 1 -0.0297917
SOD2 superoxide dismutase 2, mitochondrial -0.029601
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0293294
GOLGA4 golgin A4 -0.0290715
KMT2E lysine (K)-specific methyltransferase 2E -0.0289936
FTL ferritin, light polypeptide -0.0289566
SQSTM1 sequestosome 1 -0.0287967
PTBP3 polypyrimidine tract binding protein 3 -0.0287494
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0285182
RPS27A ribosomal protein S27a -0.028381
HMGA1 high mobility group AT-hook 1 -0.0282543
ARHGAP21 Rho GTPase activating protein 21 -0.0278504
WDR45B WD repeat domain 45B -0.0278119
RPS8 ribosomal protein S8 -0.0273881
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0272886
NPEPPS aminopeptidase puromycin sensitive -0.0271556
KRT8 keratin 8, type II -0.0270674
APOC1 apolipoprotein C-I -0.0269184
RPS16 ribosomal protein S16 -0.0269105
KIAA1217 KIAA1217 -0.0267523
RPS5 ribosomal protein S5 -0.0265833
RPS11 ribosomal protein S11 -0.0265768
FAM162A family with sequence similarity 162, member A -0.0263979
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0261558
VIM vimentin -0.0261427
PDIA3 protein disulfide isomerase family A, member 3 -0.0260867
SH3GLB1 SH3-domain GRB2-like endophilin B1 -0.0257011
ABAT 4-aminobutyrate aminotransferase -0.0256725
SEPTIN2 septin 2 -0.0256621
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma -0.0256245
NAMPT nicotinamide phosphoribosyltransferase -0.0254913
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0252424
GLG1 golgi glycoprotein 1 -0.0251242
RPS20 ribosomal protein S20 -0.0251045
SCAF11 SR-related CTD-associated factor 11 -0.0250472
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0249396
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0243014
RPS23 ribosomal protein S23 -0.0240638
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0239918
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0233651
RUNX1 runt-related transcription factor 1 -0.0232627
MATR3 matrin 3 -0.0230757