Gemfibrozil_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Gemfibrozil perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Gemfibrozil_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FNDC3B fibronectin type III domain containing 3B 0.144155
ZSWIM6 zinc finger, SWIM-type containing 6 0.136698
MACF1 microtubule-actin crosslinking factor 1 0.109303
HMGA2 high mobility group AT-hook 2 0.107004
INTS6 integrator complex subunit 6 0.103402
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0986764
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.098077
SLC38A2 solute carrier family 38, member 2 0.094097
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0882027
BIRC3 baculoviral IAP repeat containing 3 0.0878057
POTEF POTE ankyrin domain family, member F 0.0860526
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0852178
FMNL2 formin-like 2 0.0746989
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0718391
ENO1 enolase 1, (alpha) 0.0707742
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0695549
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.066296
EGFR epidermal growth factor receptor 0.0661021
MBNL1 muscleblind-like splicing regulator 1 0.0651004
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0612044
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0606619
LMO7 LIM domain 7 0.0601335
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0595208
DST dystonin 0.0594799
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.059184
AKAP12 A kinase (PRKA) anchor protein 12 0.0571747
CD44 CD44 molecule (Indian blood group) 0.0557736
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0551456
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.054885
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0485556
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0485181
SQSTM1 sequestosome 1 0.0484363
PKM pyruvate kinase, muscle 0.0476218
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0475086
ANGPTL4 angiopoietin-like 4 0.0474432
ATXN1 ataxin 1 0.0470177
BICD1 bicaudal D homolog 1 (Drosophila) 0.0469628
JAK1 Janus kinase 1 0.0467296
RUNX1 runt-related transcription factor 1 0.0445907
SVIL supervillin 0.0444085
LOC102724023 ES1 protein homolog, mitochondrial 0.0440791
LPP LIM domain containing preferred translocation partner in lipoma 0.0428983
RTN4 reticulon 4 0.0423726
APLP2 amyloid beta (A4) precursor-like protein 2 0.0421169
GLS2 glutaminase 2 (liver, mitochondrial) 0.0419631
TOP1 topoisomerase (DNA) I 0.0417527
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0412414
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0401096
DOCK4 dedicator of cytokinesis 4 0.0400511
NPAS2 neuronal PAS domain protein 2 0.0399658
ERBIN erbb2 interacting protein 0.0399548
STARD13 StAR-related lipid transfer (START) domain containing 13 0.0398572
ZNF638 zinc finger protein 638 0.039769
ANXA1 annexin A1 0.0392402
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.038365
FRMD6 FERM domain containing 6 0.0382092
RIGI RNA sensor RIG-I 0.0376964
TRA2A transformer 2 alpha homolog (Drosophila) 0.0375756
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0374027
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0371658
UTRN utrophin 0.0369009
DTNA dystrobrevin, alpha 0.0365388
RASAL2 RAS protein activator like 2 0.0360774
CLIC4 chloride intracellular channel 4 0.0359487
AHNAK AHNAK nucleoprotein 0.0354934
TRIM44 tripartite motif containing 44 0.0347928
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 0.0347674
ESYT2 extended synaptotagmin-like protein 2 0.034518
NLK nemo-like kinase 0.0344605
BBX bobby sox homolog (Drosophila) 0.0342096
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0340643
CSNK1A1 casein kinase 1, alpha 1 0.0337003
EXT1 exostosin glycosyltransferase 1 0.0332875
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0330853
USP3 ubiquitin specific peptidase 3 0.0328617
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0327102
SH3KBP1 SH3-domain kinase binding protein 1 0.0324933
SEC31A SEC31 homolog A (S. cerevisiae) 0.0324704
IL6ST interleukin 6 signal transducer 0.0324363
CEMIP2 cell migration inducing hyaluronidase 2 0.0323445
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0322359
SHPRH SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase 0.0319033
TRAM2 translocation associated membrane protein 2 0.0317265
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0317224
PITPNB phosphatidylinositol transfer protein, beta 0.031686
ASPH aspartate beta-hydroxylase 0.0313779
SMAD3 SMAD family member 3 0.0313052
ITGA6 integrin, alpha 6 0.0311462
ACTN1 actinin, alpha 1 0.0311428
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 0.0310108
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0309324
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0306315
N4BP2L2 NEDD4 binding protein 2-like 2 0.0303567
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0302601
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0302395
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0301089
SYNGAP1 synaptic Ras GTPase activating protein 1 0.0300498
EPAS1 endothelial PAS domain protein 1 0.0299799
RHOBTB3 Rho-related BTB domain containing 3 0.0298585
KMT2C lysine (K)-specific methyltransferase 2C 0.0296001

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.0864796
DSCAM Down syndrome cell adhesion molecule -0.0701433
OSMR oncostatin M receptor -0.0652934
PTMA prothymosin, alpha -0.0569028
TAS2R14 taste receptor, type 2, member 14 -0.0517692
RPL35A ribosomal protein L35a -0.0511835
DNER delta/notch-like EGF repeat containing -0.0494587
MATR3 matrin 3 -0.0486232
ZNF292 zinc finger protein 292 -0.0477136
SMYD3 SET and MYND domain containing 3 -0.0471134
RBM39 RNA binding motif protein 39 -0.0465326
LOC112694756 uncharaterized LOC112694756 -0.046237
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0438845
EIF1 eukaryotic translation initiation factor 1 -0.0438167
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0411553
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0406394
TCERG1 transcription elongation regulator 1 -0.0405573
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0400861
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0396064
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase -0.0392512
BIRC6 baculoviral IAP repeat containing 6 -0.0386786
ACER3 alkaline ceramidase 3 -0.0380397
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0378438
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0377791
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0366797
KIAA1328 KIAA1328 -0.0366353
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0359537
CEP290 centrosomal protein 290kDa -0.0358923
RPL30 ribosomal protein L30 -0.0358074
FAF2 Fas associated factor family member 2 -0.0354674
HLA-C major histocompatibility complex, class I, C -0.0353005
RPL34 ribosomal protein L34 -0.0341577
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0340642
NAMPT nicotinamide phosphoribosyltransferase -0.0339043
CIRSR corepressor of RBPJ and splicing regulator -0.0337703
HILPDA hypoxia inducible lipid droplet-associated -0.0332435
XPO1 exportin 1 -0.0332386
FBXL2 F-box and leucine-rich repeat protein 2 -0.0330855
ANKRD28 ankyrin repeat domain 28 -0.0329669
TPM4 tropomyosin 4 -0.0325843
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) -0.0324175
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) -0.0323148
RBM25 RNA binding motif protein 25 -0.0321972
CENPF centromere protein F, 350/400kDa -0.0321763
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0321109
MBD5 methyl-CpG binding domain protein 5 -0.0319027
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0317672
RPL23 ribosomal protein L23 -0.0316572
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0316522
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 -0.0311402
PHF3 PHD finger protein 3 -0.0311392
BSG basigin (Ok blood group) -0.0309971
RPS27A ribosomal protein S27a -0.030925
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1 -0.0307534
CEP95 centrosomal protein 95kDa -0.030663
NOP58 NOP58 ribonucleoprotein -0.030372
DERA deoxyribose-phosphate aldolase (putative) -0.0302715
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0294992
FAM193A family with sequence similarity 193, member A -0.0293233
SCAF11 SR-related CTD-associated factor 11 -0.0292767
ANKRD12 ankyrin repeat domain 12 -0.0287377
APPBP2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 -0.0285658
NALCN sodium leak channel, non selective -0.0283527
EEF2 eukaryotic translation elongation factor 2 -0.0282915
RPL37 ribosomal protein L37 -0.0275997
RPL12 ribosomal protein L12 -0.0273151
SENP5 SUMO1/sentrin specific peptidase 5 -0.0270946
STRN3 striatin, calmodulin binding protein 3 -0.0268654
IGFBP3 insulin-like growth factor binding protein 3 -0.0267317
ZBTB44 zinc finger and BTB domain containing 44 -0.0263394
CDK5RAP1 CDK5 regulatory subunit associated protein 1 -0.0263386
RPS20 ribosomal protein S20 -0.0262514
RPLP1 ribosomal protein, large, P1 -0.0262125
SEPTIN2 septin 2 -0.0261788
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0260893
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0260311
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0259005
SEC63 SEC63 homolog (S. cerevisiae) -0.0258204
HJURP Holliday junction recognition protein -0.0256372
YARS1 tyrosyl-tRNA synthetase 1 -0.0256051
VIM vimentin -0.0254654
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0254543
RPL4 ribosomal protein L4 -0.0253118
KMT2A lysine (K)-specific methyltransferase 2A -0.0252555
SF3B1 splicing factor 3b, subunit 1, 155kDa -0.0251944
GLCCI1 glucocorticoid induced 1 -0.0251398
ZCCHC7 zinc finger, CCHC domain containing 7 -0.025109
RPL31 ribosomal protein L31 -0.0249848
KIAA1958 KIAA1958 -0.0249308
RPL35 ribosomal protein L35 -0.0248794
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0248572
ELP2 elongator acetyltransferase complex subunit 2 -0.0248159
SETD5 SET domain containing 5 -0.0247947
CEP57L1 centrosomal protein 57kDa-like 1 -0.0246367
TTC3 tetratricopeptide repeat domain 3 -0.0244708
HDLBP high density lipoprotein binding protein -0.0243806
REST RE1-silencing transcription factor -0.0243709
HMMR hyaluronan-mediated motility receptor (RHAMM) -0.0243037
PRKD1 protein kinase D1 -0.0241762
NUP98 nucleoporin 98kDa -0.0241043