Glasdegib_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Glasdegib perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Glasdegib_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.177804
ZNF292 zinc finger protein 292 0.0982713
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0976807
PDE4B phosphodiesterase 4B, cAMP-specific 0.0847383
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0756219
RPS6 ribosomal protein S6 0.0748149
GOLGA4 golgin A4 0.0745493
DLG1 discs, large homolog 1 (Drosophila) 0.0647754
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.06029
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0584241
UBA6 ubiquitin-like modifier activating enzyme 6 0.0545098
PRELID2 PRELI domain containing 2 0.0530073
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.052768
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0520748
MYOF myoferlin 0.0515648
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0510724
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0509875
PRRC2C proline-rich coiled-coil 2C 0.0498906
PICALM phosphatidylinositol binding clathrin assembly protein 0.0495779
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.0474457
KMT2E lysine (K)-specific methyltransferase 2E 0.0472122
SET SET nuclear proto-oncogene 0.046952
NUP58 nucleoporin 58 0.0464369
HDAC9 histone deacetylase 9 0.0460705
CENPF centromere protein F, 350/400kDa 0.0457431
FAM13A family with sequence similarity 13, member A 0.045507
ANKRD36 ankyrin repeat domain 36 0.0443799
SETD5 SET domain containing 5 0.0439076
PCBP2 poly(rC) binding protein 2 0.0435126
RPL3 ribosomal protein L3 0.0434936
CDC73 cell division cycle 73 0.0425407
ECT2 epithelial cell transforming 2 0.0423301
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0423062
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0422863
SSBP2 single-stranded DNA binding protein 2 0.0420341
CAMKMT calmodulin-lysine N-methyltransferase 0.0418059
RNF145 ring finger protein 145 0.0415805
CCNL1 cyclin L1 0.0409253
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.040722
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0401003
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0398168
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0393832
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0386511
SOX6 SRY (sex determining region Y)-box 6 0.0386421
KDM3A lysine (K)-specific demethylase 3A 0.0380408
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0377338
XPO1 exportin 1 0.0377097
HELZ helicase with zinc finger 0.0377045
CAMTA1 calmodulin binding transcription activator 1 0.0369595
RPL21 ribosomal protein L21 0.0367379
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0362776
FAM168A family with sequence similarity 168, member A 0.0358658
SRP54 signal recognition particle 54kDa 0.035501
HDGF hepatoma-derived growth factor 0.0354307
RBMS3 RNA binding motif, single stranded interacting protein 3 0.034824
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0347866
DIAPH3 diaphanous-related formin 3 0.0347671
SMC4 structural maintenance of chromosomes 4 0.0335365
HILPDA hypoxia inducible lipid droplet-associated 0.0334374
EVI5 ecotropic viral integration site 5 0.0330276
COPA coatomer protein complex, subunit alpha 0.0329913
RBM26 RNA binding motif protein 26 0.0328649
PNISR PNN-interacting serine/arginine-rich protein 0.0326044
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0325028
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0323951
ZNF638 zinc finger protein 638 0.0323834
ANKRD36B ankyrin repeat domain 36B 0.0318649
INSIG2 insulin induced gene 2 0.0316948
NAMPT nicotinamide phosphoribosyltransferase 0.031291
SMAP1 small ArfGAP 1 0.0312221
CASC3 cancer susceptibility candidate 3 0.0311707
WAC WW domain containing adaptor with coiled-coil 0.0303726
RIOK3 RIO kinase 3 0.0302998
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0298954
MATR3 matrin 3 0.0297294
MKI67 marker of proliferation Ki-67 0.0296877
RPS3 ribosomal protein S3 0.0296497
KTN1 kinectin 1 (kinesin receptor) 0.0295111
DENND4A DENN/MADD domain containing 4A 0.0294792
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0294234
YAP1 Yes-associated protein 1 0.0291787
WSB1 WD repeat and SOCS box containing 1 0.029128
SRSF11 serine/arginine-rich splicing factor 11 0.0290573
ANKRD12 ankyrin repeat domain 12 0.0288094
B2M beta-2-microglobulin 0.0284985
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0284516
NBAS neuroblastoma amplified sequence 0.028181
RPL7 ribosomal protein L7 0.0281732
ENO1 enolase 1, (alpha) 0.0281614
PDIA6 protein disulfide isomerase family A, member 6 0.028128
GPBP1 GC-rich promoter binding protein 1 0.0279484
SRRM2 serine/arginine repetitive matrix 2 0.0279128
KDM6A lysine (K)-specific demethylase 6A 0.0278144
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0277369
DSTN destrin (actin depolymerizing factor) 0.0273686
ARID4B AT rich interactive domain 4B (RBP1-like) 0.027227
NAP1L1 nucleosome assembly protein 1-like 1 0.0271146
KDM2A lysine (K)-specific demethylase 2A 0.0270224
RBM25 RNA binding motif protein 25 0.0267401
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0267263

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.307863
PDE4D phosphodiesterase 4D, cAMP-specific -0.149624
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.140294
LOC112694756 uncharaterized LOC112694756 -0.101244
AHNAK AHNAK nucleoprotein -0.0922854
EGFR epidermal growth factor receptor -0.0897708
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0843014
ACTG1 actin gamma 1 -0.0836573
PKM pyruvate kinase, muscle -0.0834129
TMSB4X thymosin beta 4, X-linked -0.0758619
VCL vinculin -0.0722293
TPT1 tumor protein, translationally-controlled 1 -0.0707833
RPL35A ribosomal protein L35a -0.0593697
RPLP0 ribosomal protein, large, P0 -0.0582264
HDLBP high density lipoprotein binding protein -0.0568464
LDHA lactate dehydrogenase A -0.0507277
S100A6 S100 calcium binding protein A6 -0.050225
TXNRD1 thioredoxin reductase 1 -0.0492499
RTN4 reticulon 4 -0.0482305
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0472235
ZBTB20 zinc finger and BTB domain containing 20 -0.0470407
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0460694
GLI2 GLI family zinc finger 2 -0.0456239
TJP1 tight junction protein 1 -0.0434907
ATP9B ATPase, class II, type 9B -0.0430803
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0420913
RPS24 ribosomal protein S24 -0.0419352
PDGFC platelet derived growth factor C -0.0419289
NCEH1 neutral cholesterol ester hydrolase 1 -0.0412366
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 -0.0410786
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0409982
EFNA5 ephrin-A5 -0.0396752
OSMR oncostatin M receptor -0.0383411
ZNF217 zinc finger protein 217 -0.0359322
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.03593
CCND1 cyclin D1 -0.0352493
RPL4 ribosomal protein L4 -0.0336478
ZMYND8 zinc finger, MYND-type containing 8 -0.0328274
SGMS1 sphingomyelin synthase 1 -0.0326025
EEF2 eukaryotic translation elongation factor 2 -0.0318073
S100A10 S100 calcium binding protein A10 -0.0313487
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0309861
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0308248
RPL34 ribosomal protein L34 -0.0300294
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0297838
ANK2 ankyrin 2, neuronal -0.0288328
ZNFX1 zinc finger, NFX1-type containing 1 -0.0285722
DUSP4 dual specificity phosphatase 4 -0.0285351
EXT1 exostosin glycosyltransferase 1 -0.0269655
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 -0.0268608
S100A4 S100 calcium binding protein A4 -0.0266736
IFI16 interferon, gamma-inducible protein 16 -0.0260402
ZNF608 zinc finger protein 608 -0.0256506
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0253318
FLNB filamin B, beta -0.0245941
HMGA1 high mobility group AT-hook 1 -0.0239983
IARS1 isoleucyl-tRNA synthetase 1 -0.0235793
SPRY4 sprouty homolog 4 (Drosophila) -0.0232667
GLI3 GLI family zinc finger 3 -0.0230571
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0229278
DOCK3 dedicator of cytokinesis 3 -0.0228674
FOXP1 forkhead box P1 -0.0227351
NT5C2 5'-nucleotidase, cytosolic II -0.022667
HLA-B major histocompatibility complex, class I, B -0.0225604
ARL4C ADP-ribosylation factor-like 4C -0.0225062
SP100 SP100 nuclear antigen -0.0224603
TMSB10 thymosin beta 10 -0.0223323
RPL13A ribosomal protein L13a -0.0223021
RPS4X ribosomal protein S4, X-linked -0.0222176
VDAC1 voltage-dependent anion channel 1 -0.0220505
PRRC2B proline-rich coiled-coil 2B -0.0219545
RIGI RNA sensor RIG-I -0.0218668
RPLP1 ribosomal protein, large, P1 -0.0217513
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0217303
RHOB ras homolog family member B -0.0217227
GNAS GNAS complex locus -0.021704
NPAS2 neuronal PAS domain protein 2 -0.0217029
TRIP12 thyroid hormone receptor interactor 12 -0.0214937
CEP95 centrosomal protein 95kDa -0.0213724
FUS FUS RNA binding protein -0.0213544
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0212849
ALDOC aldolase C, fructose-bisphosphate -0.0212721
RPS27A ribosomal protein S27a -0.0211106
SDCBP syndecan binding protein (syntenin) -0.0206377
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0205475
EEF1G eukaryotic translation elongation factor 1 gamma -0.0205297
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 -0.0204546
ADNP activity-dependent neuroprotector homeobox -0.0202175
NF1 neurofibromin 1 -0.0201674
TKT transketolase -0.0198819
RPS23 ribosomal protein S23 -0.0198441
ARB2A ARB2 cotranscriptional regulator A -0.0198035
RAB7A RAB7A, member RAS oncogene family -0.0195863
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0195589
PLSCR1 phospholipid scramblase 1 -0.0195588
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.0195466
ARF1 ADP-ribosylation factor 1 -0.0193272
RAB27B RAB27B, member RAS oncogene family -0.0191996
RPS19 ribosomal protein S19 -0.0191651
THBD thrombomodulin -0.0187645