Glycyrrhizic acid_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Glycyrrhizic acid perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Glycyrrhizic acid_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0937278
EEF1G eukaryotic translation elongation factor 1 gamma 0.0839742
EEF2 eukaryotic translation elongation factor 2 0.0744399
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0738609
LAMB3 laminin, beta 3 0.073561
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0715659
PTK2 protein tyrosine kinase 2 0.0676367
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.067065
NUP58 nucleoporin 58 0.0658139
PGK1 phosphoglycerate kinase 1 0.0656434
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.065474
RAD21 RAD21 homolog (S. pombe) 0.0590097
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0576114
ZFAND3 zinc finger, AN1-type domain 3 0.0547268
ATP13A3 ATPase type 13A3 0.0524826
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0523871
STC1 stanniocalcin 1 0.0517851
UBA6 ubiquitin-like modifier activating enzyme 6 0.0513456
USP3 ubiquitin specific peptidase 3 0.0510683
ADAM17 ADAM metallopeptidase domain 17 0.050723
ELL2 elongation factor, RNA polymerase II, 2 0.0505708
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0502717
TXNRD1 thioredoxin reductase 1 0.0499016
TPD52 tumor protein D52 0.0497443
RB1CC1 RB1-inducible coiled-coil 1 0.0496215
RASA2 RAS p21 protein activator 2 0.0475219
PRRC2B proline-rich coiled-coil 2B 0.0461488
ZNF292 zinc finger protein 292 0.0448586
PKM pyruvate kinase, muscle 0.0442706
WDR43 WD repeat domain 43 0.0433724
USP9X ubiquitin specific peptidase 9, X-linked 0.0432413
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0432236
MAST4 microtubule associated serine/threonine kinase family member 4 0.0418531
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0414766
FOXJ3 forkhead box J3 0.0413424
WAC WW domain containing adaptor with coiled-coil 0.0409962
NCKAP1 NCK-associated protein 1 0.0404372
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0399375
PUM2 pumilio RNA-binding family member 2 0.0397367
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.0376112
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0374282
CLTC clathrin, heavy chain (Hc) 0.0370828
BIRC6 baculoviral IAP repeat containing 6 0.0368753
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0367541
COG5 component of oligomeric golgi complex 5 0.036649
SRPK2 SRSF protein kinase 2 0.0365156
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0364496
OGA O-GlcNAcase 0.036304
ZEB1 zinc finger E-box binding homeobox 1 0.0362051
SNX9 sorting nexin 9 0.035853
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0349421
CDK17 cyclin-dependent kinase 17 0.0347651
ARFGEF3 ARFGEF family member 3 0.0345268
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0344868
RPL4 ribosomal protein L4 0.0344769
TM9SF3 transmembrane 9 superfamily member 3 0.0344331
RLF rearranged L-myc fusion 0.0343493
FLNA filamin A, alpha 0.0339023
ZMYM2 zinc finger, MYM-type 2 0.0336681
CCNL1 cyclin L1 0.0334409
TRIO trio Rho guanine nucleotide exchange factor 0.0334074
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0332967
NBAS neuroblastoma amplified sequence 0.0330808
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0327142
ANXA5 annexin A5 0.032469
C1ORF52 chromosome 1 open reading frame 52 0.0324582
ADAM9 ADAM metallopeptidase domain 9 0.0322874
FUBP3 far upstream element (FUSE) binding protein 3 0.0321444
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.0320837
EIF4B eukaryotic translation initiation factor 4B 0.0319333
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3 0.0317597
UBE3A ubiquitin protein ligase E3A 0.0317207
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0312907
AFF4 AF4/FMR2 family, member 4 0.0310286
YEATS2 YEATS domain containing 2 0.0310139
TOP1 topoisomerase (DNA) I 0.0308099
RBM33 RNA binding motif protein 33 0.0307617
SBF2 SET binding factor 2 0.0307119
RTN4 reticulon 4 0.0306532
GOLGA4 golgin A4 0.0305719
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0304242
BRWD3 bromodomain and WD repeat domain containing 3 0.0303832
FRS2 fibroblast growth factor receptor substrate 2 0.0303763
BHLHE40 basic helix-loop-helix family, member e40 0.0302577
CDC73 cell division cycle 73 0.0302543
FAR1 fatty acyl CoA reductase 1 0.0300984
PALS2 protein associated with LIN7 2, MAGUK p55 family member 0.0300883
KDM6A lysine (K)-specific demethylase 6A 0.0299422
PDIA3 protein disulfide isomerase family A, member 3 0.0298744
G2E3 G2/M-phase specific E3 ubiquitin protein ligase 0.029749
KDM3A lysine (K)-specific demethylase 3A 0.0297118
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0296654
CD68 CD68 molecule 0.0296311
CELF1 CUGBP, Elav-like family member 1 0.029523
SCAF11 SR-related CTD-associated factor 11 0.0295196
NSMAF neutral sphingomyelinase (N-SMase) activation associated factor 0.0294715
CAMTA1 calmodulin binding transcription activator 1 0.0294035
CAPRIN1 cell cycle associated protein 1 0.0291023
LMAN1 lectin, mannose-binding, 1 0.0290924
CALU calumenin 0.0289061

decreased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.186072
FRMD6 FERM domain containing 6 -0.170945
ZNF438 zinc finger protein 438 -0.126449
NABP1 nucleic acid binding protein 1 -0.108614
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.098832
HMGA2 high mobility group AT-hook 2 -0.0928276
ARHGAP22 Rho GTPase activating protein 22 -0.0879859
MT2A metallothionein 2A -0.0793712
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.076285
SP100 SP100 nuclear antigen -0.0706568
INTS6 integrator complex subunit 6 -0.0617468
IFI16 interferon, gamma-inducible protein 16 -0.0576704
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0548347
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0546793
ASPH aspartate beta-hydroxylase -0.0532129
NAV3 neuron navigator 3 -0.0528783
HDAC9 histone deacetylase 9 -0.0520297
TMSB10 thymosin beta 10 -0.0509573
MTAP methylthioadenosine phosphorylase -0.049347
MCTP1 multiple C2 domains, transmembrane 1 -0.048508
RPS6 ribosomal protein S6 -0.0483579
EXT1 exostosin glycosyltransferase 1 -0.0451705
FHIT fragile histidine triad -0.0444083
WNT2B wingless-type MMTV integration site family, member 2B -0.0434108
TPT1 tumor protein, translationally-controlled 1 -0.0426424
GFPT2 glutamine-fructose-6-phosphate transaminase 2 -0.0418702
RAD51B RAD51 paralog B -0.0418208
BNC2 basonuclin 2 -0.0412813
FTL ferritin, light polypeptide -0.0392543
RPS8 ribosomal protein S8 -0.0372729
DGKI diacylglycerol kinase, iota -0.0367784
AHNAK AHNAK nucleoprotein -0.0367543
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0358668
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0350273
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0346442
MYRFL myelin regulatory factor-like -0.0343775
NAV2 neuron navigator 2 -0.033757
RPS3 ribosomal protein S3 -0.0332671
MSH4 mutS homolog 4 -0.0319239
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0318674
AEBP2 AE binding protein 2 -0.0318126
RPL7A ribosomal protein L7a -0.0312859
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0304689
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0301399
PTPRG protein tyrosine phosphatase, receptor type, G -0.030109
SLC38A2 solute carrier family 38, member 2 -0.0295672
RPS19 ribosomal protein S19 -0.0294253
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0293498
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0290978
DST dystonin -0.029018
RCOR1 REST corepressor 1 -0.0288981
EFNB2 ephrin-B2 -0.0285414
RPLP1 ribosomal protein, large, P1 -0.0280715
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0278247
ZC3H12B zinc finger CCCH-type containing 12B -0.0275763
SGMS2 sphingomyelin synthase 2 -0.0275609
ALCAM activated leukocyte cell adhesion molecule -0.027542
SAMD4A sterile alpha motif domain containing 4A -0.0274089
RPS12 ribosomal protein S12 -0.0270942
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.0257284
DDR2 discoidin domain receptor tyrosine kinase 2 -0.0249606
DIAPH2 diaphanous-related formin 2 -0.0248437
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0248038
ANK2 ankyrin 2, neuronal -0.024458
TIAM2 T-cell lymphoma invasion and metastasis 2 -0.0243865
RPS29 ribosomal protein S29 -0.0242695
RPL34 ribosomal protein L34 -0.024194
COL27A1 collagen, type XXVII, alpha 1 -0.0241727
RPS24 ribosomal protein S24 -0.0241727
DENND1A DENN/MADD domain containing 1A -0.0237304
RASAL2 RAS protein activator like 2 -0.0235294
CAST calpastatin -0.023216
STAU2 staufen double-stranded RNA binding protein 2 -0.0230617
EGR1 early growth response 1 -0.0230488
RPLP2 ribosomal protein, large, P2 -0.0230141
PLSCR1 phospholipid scramblase 1 -0.0224227
RPL5 ribosomal protein L5 -0.0222307
SLC9A1 solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1 -0.0220472
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0218344
RPL31 ribosomal protein L31 -0.0217433
EXOC4 exocyst complex component 4 -0.021296
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0209749
AKAP12 A kinase (PRKA) anchor protein 12 -0.0202759
KCNMB4 potassium channel subfamily M regulatory beta subunit 4 -0.0200396
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0199217
CDKL1 cyclin-dependent kinase-like 1 (CDC2-related kinase) -0.0197926
CCDC91 coiled-coil domain containing 91 -0.0195582
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0193741
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 -0.0193595
RPS23 ribosomal protein S23 -0.0192696
RPL36 ribosomal protein L36 -0.0192462
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like -0.0191239
RIGI RNA sensor RIG-I -0.0190725
AKAP9 A kinase (PRKA) anchor protein 9 -0.018992
RAB7A RAB7A, member RAS oncogene family -0.0188893
LRMDA leucine rich melanocyte differentiation associated -0.0188429
RPS27A ribosomal protein S27a -0.0186397
TRIM44 tripartite motif containing 44 -0.0183812
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0182015
HDAC4 histone deacetylase 4 -0.0181718