Glycyrrhizic acid_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Glycyrrhizic acid perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Glycyrrhizic acid_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.142872
FNDC3B fibronectin type III domain containing 3B 0.136105
LSAMP limbic system-associated membrane protein 0.116233
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.115635
FLNA filamin A, alpha 0.0941709
NLGN1 neuroligin 1 0.0886614
FMN1 formin 1 0.073959
NRG3 neuregulin 3 0.0723302
SLC39A11 solute carrier family 39, member 11 0.0685821
ICAM1 intercellular adhesion molecule 1 0.0631337
RAD51B RAD51 paralog B 0.0593366
EEF2 eukaryotic translation elongation factor 2 0.0537798
LINGO2 leucine rich repeat and Ig domain containing 2 0.052568
PKM pyruvate kinase, muscle 0.0499112
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0496816
FHIT fragile histidine triad 0.0492797
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0489158
NAV2 neuron navigator 2 0.0488084
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0469918
SFTPA2 surfactant protein A2 0.0460673
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0459576
SREBF2 sterol regulatory element binding transcription factor 2 0.0443845
FRMD4A FERM domain containing 4A 0.0436794
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0422691
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0399831
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0387131
FLNB filamin B, beta 0.0368373
BACE2 beta-site APP-cleaving enzyme 2 0.0364874
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0362428
NOTCH2 notch 2 0.035709
MSI2 musashi RNA-binding protein 2 0.0356544
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0353001
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0341255
HDAC9 histone deacetylase 9 0.0340175
IGF1R insulin-like growth factor 1 receptor 0.0337459
PGK1 phosphoglycerate kinase 1 0.033181
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0326668
ZMIZ1 zinc finger, MIZ-type containing 1 0.0324255
TRIO trio Rho guanine nucleotide exchange factor 0.031811
SEPTIN9 septin 9 0.0302826
FMNL2 formin-like 2 0.0296865
CTSB cathepsin B 0.0295572
PRELID2 PRELI domain containing 2 0.0290602
SOX10 SRY (sex determining region Y)-box 10 0.0288289
KDM4C lysine (K)-specific demethylase 4C 0.0283841
STK10 serine/threonine kinase 10 0.0275796
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.026178
ATXN1 ataxin 1 0.0259558
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0255997
RUNX1 runt-related transcription factor 1 0.0255507
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0252464
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.02478
HDAC4 histone deacetylase 4 0.0243706
SMYD3 SET and MYND domain containing 3 0.0240615
CFAP20DC CFAP20 domain containing 0.0239449
NFE2L1 nuclear factor, erythroid 2-like 1 0.0239298
YEATS2 YEATS domain containing 2 0.0238965
RERE arginine-glutamic acid dipeptide (RE) repeats 0.023689
ENTHD1 ENTH domain containing 1 0.0226228
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.022512
CCDC91 coiled-coil domain containing 91 0.0222247
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0221724
MYH9 myosin, heavy chain 9, non-muscle 0.0221463
EXOC4 exocyst complex component 4 0.0221387
PTPRM protein tyrosine phosphatase, receptor type, M 0.0218641
PTPRG protein tyrosine phosphatase, receptor type, G 0.0218579
PRKCE protein kinase C, epsilon 0.0213073
SVIL supervillin 0.0212863
NCOR2 nuclear receptor corepressor 2 0.021093
MSN moesin 0.0210833
CCNL1 cyclin L1 0.021063
SMAD3 SMAD family member 3 0.0208378
CLEC2D C-type lectin domain family 2, member D 0.0207629
TENM3 teneurin transmembrane protein 3 0.0207139
CADM1 cell adhesion molecule 1 0.0206664
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0205126
TCF20 transcription factor 20 (AR1) 0.0204658
LDLRAD3 low density lipoprotein receptor class A domain containing 3 0.0203273
LRMDA leucine rich melanocyte differentiation associated 0.0202867
PTP4A1 protein tyrosine phosphatase type IVA, member 1 0.0201121
USP22 ubiquitin specific peptidase 22 0.0200001
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0199533
MCL1 myeloid cell leukemia 1 0.0199252
KLHL29 kelch-like family member 29 0.0198322
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0197062
TBC1D22A TBC1 domain family, member 22A 0.0197013
BABAM2 BRISC and BRCA1 A complex member 2 0.0195555
TNNC1 troponin C type 1 (slow) 0.019406
LOC112694756 uncharaterized LOC112694756 0.0193446
RPTOR regulatory associated protein of MTOR, complex 1 0.0191869
EP300 E1A binding protein p300 0.0190532
EEF1G eukaryotic translation elongation factor 1 gamma 0.0190162
CMSS1 cms1 ribosomal small subunit homolog (yeast) 0.0189867
KAZN kazrin, periplakin interacting protein 0.0189396
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0188712
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0188007
ARID1A AT rich interactive domain 1A (SWI-like) 0.0187099
IGFBP3 insulin-like growth factor binding protein 3 0.0186735
SND1 staphylococcal nuclease and tudor domain containing 1 0.018575
CNIH3 cornichon family AMPA receptor auxiliary protein 3 0.018528

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.240741
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.112335
FTL ferritin, light polypeptide -0.0987285
PTMA prothymosin, alpha -0.092788
RPS3 ribosomal protein S3 -0.0815741
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0799177
TMSB10 thymosin beta 10 -0.0765251
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0705515
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0653648
EIF1 eukaryotic translation initiation factor 1 -0.0573305
TPT1 tumor protein, translationally-controlled 1 -0.0560015
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0543576
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0541283
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0518765
AKAP12 A kinase (PRKA) anchor protein 12 -0.0455448
GARS1 glycyl-tRNA synthetase 1 -0.0449488
CENPF centromere protein F, 350/400kDa -0.0436983
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0426391
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0422338
CANX calnexin -0.0411958
RPLP1 ribosomal protein, large, P1 -0.040533
RPL32 ribosomal protein L32 -0.0372652
RPL31 ribosomal protein L31 -0.0368867
RPS6 ribosomal protein S6 -0.0366354
RPL12 ribosomal protein L12 -0.0345295
RPL35A ribosomal protein L35a -0.0343804
GOLGA4 golgin A4 -0.0339568
NAP1L1 nucleosome assembly protein 1-like 1 -0.0335999
RPS24 ribosomal protein S24 -0.0334028
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0332067
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0327174
MT2A metallothionein 2A -0.0312634
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0308525
RPS8 ribosomal protein S8 -0.0301606
FRMD5 FERM domain containing 5 -0.0298909
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0265245
RPL11 ribosomal protein L11 -0.0264393
RPL23 ribosomal protein L23 -0.0263933
RPL34 ribosomal protein L34 -0.0258633
ANLN anillin, actin binding protein -0.0257299
RAD21 RAD21 homolog (S. pombe) -0.0255796
TXNRD1 thioredoxin reductase 1 -0.0254424
TFG TRK-fused gene -0.025353
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0249047
KDM3A lysine (K)-specific demethylase 3A -0.0248758
KPNB1 karyopherin (importin) beta 1 -0.0247625
KTN1 kinectin 1 (kinesin receptor) -0.0245353
B2M beta-2-microglobulin -0.02452
TKT transketolase -0.0244687
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 -0.0239266
RPS4X ribosomal protein S4, X-linked -0.0239061
CCDC47 coiled-coil domain containing 47 -0.0238065
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0237645
RPS12 ribosomal protein S12 -0.0236661
MORF4L2 mortality factor 4 like 2 -0.0235461
S100A9 S100 calcium binding protein A9 -0.0233837
RSL1D1 ribosomal L1 domain containing 1 -0.0233129
NPR2 natriuretic peptide receptor 2 -0.023266
H3-3B H3.3 histone B -0.0231198
QKI QKI, KH domain containing, RNA binding -0.0230497
CLINT1 clathrin interactor 1 -0.0230424
TENM1 teneurin transmembrane protein 1 -0.0230404
NAMPT nicotinamide phosphoribosyltransferase -0.0230137
RPS14 ribosomal protein S14 -0.0225662
MAP4 microtubule-associated protein 4 -0.0224153
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0222873
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0221032
RPL19 ribosomal protein L19 -0.0220814
TPM4 tropomyosin 4 -0.0219368
CBX3 chromobox homolog 3 -0.0217649
TFPI2 tissue factor pathway inhibitor 2 -0.0216762
RPS5 ribosomal protein S5 -0.0216268
RPS27A ribosomal protein S27a -0.021609
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0215609
PDIA6 protein disulfide isomerase family A, member 6 -0.0214361
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 -0.0214244
SEPTIN7 septin 7 -0.0213855
NPEPPS aminopeptidase puromycin sensitive -0.0208464
S100A10 S100 calcium binding protein A10 -0.0206624
STAU1 staufen double-stranded RNA binding protein 1 -0.0205189
RLF rearranged L-myc fusion -0.0205052
RPLP2 ribosomal protein, large, P2 -0.020486
NOP58 NOP58 ribonucleoprotein -0.0204362
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0202903
MKI67 marker of proliferation Ki-67 -0.0202353
RPL36A ribosomal protein L36a -0.0202197
LAMP2 lysosomal-associated membrane protein 2 -0.0200908
HMGB2 high mobility group box 2 -0.0200261
STMN1 stathmin 1 -0.0199527
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0199484
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0198776
ARID4B AT rich interactive domain 4B (RBP1-like) -0.019858
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0197765
RRBP1 ribosome binding protein 1 -0.0195863
RPL5 ribosomal protein L5 -0.01924
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0192167
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0191953
ENO1 enolase 1, (alpha) -0.0189999
TRIM33 tripartite motif containing 33 -0.0189616
RPS16 ribosomal protein S16 -0.0185993