HCC-33 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Small Cell Lung Carcinoma Tumour (Cell Model Passports, SIDM01071)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01071
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Genes

198 proteins associated with the cell line HCC-33 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ACTL6A actin-like 6A
ACYP1 acylphosphatase 1, erythrocyte (common) type
ANKLE2 ankyrin repeat and LEM domain containing 2
B3GALT6 UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
BUD31 BUD31 homolog (S. cerevisiae)
C1ORF159 chromosome 1 open reading frame 159
C1ORF198 chromosome 1 open reading frame 198
CALCOCO2 calcium binding and coiled-coil domain 2
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast)
CBX3 chromobox homolog 3
CDCA7L cell division cycle associated 7-like
CENPV centromere protein V
CGNL1 cingulin-like 1
CHAMP1 chromosome alignment maintaining phosphoprotein 1
CTBP1 C-terminal binding protein 1
CTPS1 CTP synthase 1
CUL4A cullin 4A
DAAM1 dishevelled associated activator of morphogenesis 1
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
DDX51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
DNM1L dynamin 1-like
ENO2 enolase 2 (gamma, neuronal)
ENY2 enhancer of yellow 2 homolog (Drosophila)
EP400 E1A binding protein p400
ERI3 ERI1 exoribonuclease family member 3
FCF1 FCF1 rRNA-processing protein
FYTTD1 forty-two-three domain containing 1
GDE1 glycerophosphodiester phosphodiesterase 1
GDI1 GDP dissociation inhibitor 1
GOLGA3 golgin A3
GSK3B glycogen synthase kinase 3 beta
GTF2I general transcription factor IIi
HDAC2 histone deacetylase 2
HDAC7 histone deacetylase 7
HMGN2 high mobility group nucleosomal binding domain 2
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0
IGFBP2 insulin-like growth factor binding protein 2, 36kDa
IGFBPL1 insulin-like growth factor binding protein-like 1
IPO8 importin 8
KDM1A lysine (K)-specific demethylase 1A
LAMA2 laminin, alpha 2
LSM8 LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
MAP7D3 MAP7 domain containing 3
MRFAP1 Morf4 family associated protein 1
MRPS30 mitochondrial ribosomal protein S30
MYO6 myosin VI
NCBP1 nuclear cap binding protein subunit 1, 80kDa
NECAB2 N-terminal EF-hand calcium binding protein 2
PANK4 pantothenate kinase 4
PDS5A PDS5 cohesin associated factor A
PGAM5 phosphoglycerate mutase family member 5
PNISR PNN-interacting serine/arginine-rich protein
POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD)
PPDPF pancreatic progenitor cell differentiation and proliferation factor
PPT1 palmitoyl-protein thioesterase 1
PQBP1 polyglutamine binding protein 1
PRTFDC1 phosphoribosyl transferase domain containing 1
PSIP1 PC4 and SFRS1 interacting protein 1
PUF60 poly-U binding splicing factor 60KDa
PXMP2 peroxisomal membrane protein 2, 22kDa
PYGL phosphorylase, glycogen, liver
RAD21 RAD21 homolog (S. pombe)
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2
RBM25 RNA binding motif protein 25
RBM26 RNA binding motif protein 26
RDH14 retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
RFC2 replication factor C (activator 1) 2, 40kDa
RFC4 replication factor C (activator 1) 4, 37kDa
RFC5 replication factor C (activator 1) 5, 36.5kDa
RLF rearranged L-myc fusion
RTN4RL2 reticulon 4 receptor-like 2
SAMD11 sterile alpha motif domain containing 11
SDF4 stromal cell derived factor 4
SMC1A structural maintenance of chromosomes 1A
SMC3 structural maintenance of chromosomes 3
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1
SNRPA1 small nuclear ribonucleoprotein polypeptide A'
SRRT serrate, RNA effector molecule
SRSF1 serine/arginine-rich splicing factor 1
SRSF3 serine/arginine-rich splicing factor 3
SRSF5 serine/arginine-rich splicing factor 5
SRSF6 serine/arginine-rich splicing factor 6
SRSF7 serine/arginine-rich splicing factor 7
TAGLN3 transgelin 3
TMEM59 transmembrane protein 59
TRIT1 tRNA isopentenyltransferase 1
TRPT1 tRNA phosphotransferase 1
TUBB2B tubulin, beta 2B class IIb
U2AF2 U2 small nuclear RNA auxiliary factor 2
UBE2T ubiquitin-conjugating enzyme E2T
UBE3C ubiquitin protein ligase E3C
USP5 ubiquitin specific peptidase 5 (isopeptidase T)
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae)
WBP11 WW domain binding protein 11
ZMPSTE24 zinc metallopeptidase STE24
ZNF384 zinc finger protein 384
ZNF385A zinc finger protein 385A

Symbol Name
ACADSB acyl-CoA dehydrogenase, short/branched chain
AHNAK AHNAK nucleoprotein
AHSG alpha-2-HS-glycoprotein
AKAP2 A kinase (PRKA) anchor protein 2
ALDH18A1 aldehyde dehydrogenase 18 family, member A1
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase
ANXA2 annexin A2
AP2M1 adaptor-related protein complex 2, mu 1 subunit
ARHGAP36 Rho GTPase activating protein 36
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa
ASCC1 activating signal cointegrator 1 complex subunit 1
ATAD3A ATPase family, AAA domain containing 3A
ATAD3B ATPase family, AAA domain containing 3B
BAG2 BCL2-associated athanogene 2
BAIAP2 BAI1-associated protein 2
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
C12ORF43 chromosome 12 open reading frame 43
CAPNS1 calpain, small subunit 1
CASP2 caspase 2, apoptosis-related cysteine peptidase
CAT catalase
CPT1A carnitine palmitoyltransferase 1A (liver)
CYFIP1 cytoplasmic FMR1 interacting protein 1
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase)
DEPDC1B DEP domain containing 1B
DHODH dihydroorotate dehydrogenase (quinone)
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1
ECH1 enoyl CoA hydratase 1, peroxisomal
EEA1 early endosome antigen 1
ENDOD1 endonuclease domain containing 1
FNDC3A fibronectin type III domain containing 3A
GALE UDP-galactose-4-epimerase
GIPC2 GIPC PDZ domain containing family, member 2
GIT2 G protein-coupled receptor kinase interacting ArfGAP 2
GLUD1 glutamate dehydrogenase 1
GMPPA GDP-mannose pyrophosphorylase A
GNG5 guanine nucleotide binding protein (G protein), gamma 5
GNPAT glyceronephosphate O-acyltransferase
GNPDA1 glucosamine-6-phosphate deaminase 1
GPX8 glutathione peroxidase 8 (putative)
GSTK1 glutathione S-transferase kappa 1
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
HOMER1 homer scaffolding protein 1
IER3IP1 immediate early response 3 interacting protein 1
IGSF1 immunoglobulin superfamily, member 1
IGSF8 immunoglobulin superfamily, member 8
IQGAP3 IQ motif containing GTPase activating protein 3
ISCU iron-sulfur cluster assembly enzyme
ITGAV integrin, alpha V
ITSN2 intersectin 2
KLF5 Kruppel-like factor 5 (intestinal)
LAD1 ladinin 1
LYPLAL1 lysophospholipase-like 1
M6PR mannose-6-phosphate receptor (cation dependent)
MCU mitochondrial calcium uniporter
METTL7A methyltransferase like 7A
MEX3B mex-3 RNA binding family member B
MGAT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MRPL22 mitochondrial ribosomal protein L22
MTFP1 mitochondrial fission process 1
MTND2P3 MT-ND2 pseudogene 3
NAGA N-acetylgalactosaminidase, alpha-
NAT10 N-acetyltransferase 10 (GCN5-related)
NDUFAF5 NADH dehydrogenase (ubiquinone) complex I, assembly factor 5
NEGR1-IT1 NEGR1 intronic transcript 1
NFS1 NFS1 cysteine desulfurase
NME3 NME/NM23 nucleoside diphosphate kinase 3
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
PEX14 peroxisomal biogenesis factor 14
PIBF1 progesterone immunomodulatory binding factor 1
PINX1 PIN2/TERF1 interacting, telomerase inhibitor 1
PKP3 plakophilin 3
PLOD1 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
PMM2 phosphomannomutase 2
PNPT1 polyribonucleotide nucleotidyltransferase 1
PTPRC protein tyrosine phosphatase, receptor type, C
RHOC ras homolog family member C
RNF103 ring finger protein 103
RPAP2 RNA polymerase II associated protein 2
RPS27L ribosomal protein S27-like
RRBP1 ribosome binding protein 1
SEC23A Sec23 homolog A (S. cerevisiae)
SLC29A2 solute carrier family 29 (equilibrative nucleoside transporter), member 2
SNAP23 synaptosomal-associated protein, 23kDa
SPRYD4 SPRY domain containing 4
SQSTM1 sequestosome 1
STXBP2 syntaxin binding protein 2
SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit
SWAP70 SWAP switching B-cell complex 70kDa subunit
TELO2 telomere maintenance 2
THBS3 thrombospondin 3
TMOD3 tropomodulin 3 (ubiquitous)
TPP1 tripeptidyl peptidase I
TRIM56 tripartite motif containing 56
TSC22D1 TSC22 domain family, member 1
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
TUFM Tu translation elongation factor, mitochondrial
VAV1 vav 1 guanine nucleotide exchange factor
VMP1 vacuole membrane protein 1
WASF2 WAS protein family, member 2
ZC3HAV1 zinc finger CCCH-type, antiviral 1