HCC-44 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

32 genes with high or low copy number in HCC-44 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
SBSPON somatomedin B and thrombospondin, type 1 domain containing 2.3178
TERF1 telomeric repeat binding factor (NIMA-interacting) 1 2.3178
LOC100130301 2.30944
MARCH11 membrane-associated ring finger (C3HC4) 11 2.19863
FAM134B family with sequence similarity 134, member B 2.19863
ZNF622 zinc finger protein 622 2.19863
MYO10 myosin X 2.19301
DNAH5 dynein, axonemal, heavy chain 5 2.18778
ANKH ANKH inorganic pyrophosphate transport regulator 2.18778
FAM105A family with sequence similarity 105, member A 2.18778
LOC100130744 uncharacterized LOC100130744 2.18778
MIR4637 microRNA 4637 2.18778
TRIO trio Rho guanine nucleotide exchange factor 2.18124
FBXL7 F-box and leucine-rich repeat protein 7 2.17694
MIR1206 microRNA 1206 2.07612
MIR1208 microRNA 1208 2.07136
MIR1205 microRNA 1205 2.07136
MIR1207 microRNA 1207 2.07136
TMEM75 transmembrane protein 75 2.06401
CCAT1 colon cancer associated transcript 1 (non-protein coding) 2.0614
POU5F1B POU class 5 homeobox 1B 2.05836
CTNND2 catenin (cadherin-associated protein), delta 2 2.05129
CDH18 cadherin 18, type 2 2.0489
CDH12 cadherin 12, type 2 (N-cadherin 2) 2.0489
GUSBP1 glucuronidase, beta pseudogene 1 2.0489
MIR1204 microRNA 1204 2.04661
PVT1 Pvt1 oncogene (non-protein coding) 2.04585

low copy number

Symbol Name Standardized Value
OR4F5 olfactory receptor, family 4, subfamily F, member 5 -2.99615
OR4C11 olfactory receptor, family 4, subfamily C, member 11 -2.98179
HLA-H major histocompatibility complex, class I, H (pseudogene) -2.8504
HLA-J major histocompatibility complex, class I, J (pseudogene) -2.8473
HCG4B HLA complex group 4B (non-protein coding) -2.75184