HCC-78 Gene Set

Dataset Sanger Dependency Map Cancer Cell Line Proteomics
Category proteomics
Type cell line
Description cell line derived from Non-Small Cell Lung Carcinoma Metastasis (Cell Model Passports, SIDM01068)
External Link https://cellmodelpassports.sanger.ac.uk/passports/SIDM01068
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Genes

195 proteins associated with the cell line HCC-78 from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.

Symbol Name
ADGRF1 adhesion G protein-coupled receptor F1
AKAP6 A kinase (PRKA) anchor protein 6
ALDH7A1 aldehyde dehydrogenase 7 family, member A1
ANXA10 annexin A10
ANXA11 annexin A11
APOB apolipoprotein B
APOE apolipoprotein E
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11
ATXN7L3B ataxin 7-like 3B
BROX BRO1 domain and CAAX motif containing
C1ORF116 chromosome 1 open reading frame 116
C2CD5 C2 calcium-dependent domain containing 5
CA9 carbonic anhydrase IX
CCDC6 coiled-coil domain containing 6
CCNK cyclin K
CCNYL1 cyclin Y-like 1
CD47 CD47 molecule
CDC50B cell division cycle 50 P4-ATPase accessory subunit B
CDC73 cell division cycle 73
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)
CHPF chondroitin polymerizing factor
CIB1 calcium and integrin binding 1 (calmyrin)
CLASP1 cytoplasmic linker associated protein 1
COA4 cytochrome c oxidase assembly factor 4 homolog (S. cerevisiae)
CPD carboxypeptidase D
CPS1 carbamoyl-phosphate synthase 1, mitochondrial
CTR9 CTR9, Paf1/RNA polymerase II complex component
CTSS cathepsin S
CYB5A cytochrome b5 type A (microsomal)
DDAH1 dimethylarginine dimethylaminohydrolase 1
DDX19A DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A
EPN1 epsin 1
GALM galactose mutarotase (aldose 1-epimerase)
GEMIN4 gem (nuclear organelle) associated protein 4
GLS2 glutaminase 2 (liver, mitochondrial)
GLUL glutamate-ammonia ligase
GOLM1 golgi membrane protein 1
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial
GPR107 G protein-coupled receptor 107
HMGCL 3-hydroxymethyl-3-methylglutaryl-CoA lyase
HNF1A HNF1 homeobox A
HPF1 histone PARylation factor 1
HSPBP1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
INTS7 integrator complex subunit 7
LACTB2 lactamase, beta 2
LPCAT1 lysophosphatidylcholine acyltransferase 1
LPP LIM domain containing preferred translocation partner in lipoma
MAP3K7 mitogen-activated protein kinase kinase kinase 7
MCDR3 macular dystrophy, retinal 3
MRPL32 mitochondrial ribosomal protein L32
MSI1 musashi RNA-binding protein 1
MUC4 mucin 4, cell surface associated
MUL1 mitochondrial E3 ubiquitin protein ligase 1
MVP major vault protein
MYO6 myosin VI
NAGLU N-acetylglucosaminidase, alpha
NCDN neurochondrin
NIT1 nitrilase 1
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa
OAT ornithine aminotransferase
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
PRPF31 pre-mRNA processing factor 31
PRRC2B proline-rich coiled-coil 2B
PTER phosphotriesterase related
QRICH1 glutamine-rich 1
RAD50 RAD50 homolog (S. cerevisiae)
RBM27 RNA binding motif protein 27
RBM34 RNA binding motif protein 34
RCC1 regulator of chromosome condensation 1
RDH13 retinol dehydrogenase 13 (all-trans/9-cis)
RFX1 regulatory factor X, 1 (influences HLA class II expression)
RNF7 ring finger protein 7
RNPEP arginyl aminopeptidase (aminopeptidase B)
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3
SGSH N-sulfoglucosamine sulfohydrolase
SLFN5 schlafen family member 5
SNAPIN SNAP-associated protein
SNX18 sorting nexin 18
SPATS2L spermatogenesis associated, serine-rich 2-like
SRGAP2 SLIT-ROBO Rho GTPase activating protein 2
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1
THOP1 thimet oligopeptidase 1
THSD7A thrombospondin, type I, domain containing 7A
TMC5 transmembrane channel-like 5
TMEM238 transmembrane protein 238
TRAPPC5 trafficking protein particle complex 5
TSEN34 TSEN34 tRNA splicing endonuclease subunit
TUBAL3 tubulin, alpha-like 3
TXNDC17 thioredoxin domain containing 17
UBE4A ubiquitination factor E4A
VPS18 vacuolar protein sorting 18 homolog (S. cerevisiae)
WRAP53 WD repeat containing, antisense to TP53
ZFAND6 zinc finger, AN1-type domain 6
ZNF296 zinc finger protein 296
ZNF671 zinc finger protein 671

Symbol Name
ACSL1 acyl-CoA synthetase long-chain family member 1
AK9 adenylate kinase 9
ANKRD17 ankyrin repeat domain 17
ANKZF1 ankyrin repeat and zinc finger domain containing 1
AP1M1 adaptor-related protein complex 1, mu 1 subunit
ARSB arylsulfatase B
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1
ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F
BASP1 brain abundant, membrane attached signal protein 1
BLMH bleomycin hydrolase
BRD1 bromodomain containing 1
BRD4 bromodomain containing 4
CDK5RAP1 CDK5 regulatory subunit associated protein 1
CDS1 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
CENPH centromere protein H
CEP104 centrosomal protein 104kDa
CHAF1A chromatin assembly factor 1, subunit A (p150)
COQ7 coenzyme Q7 homolog, ubiquinone (yeast)
CSNK1E casein kinase 1, epsilon
CXXC5 CXXC finger protein 5
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5
DOCK6 dedicator of cytokinesis 6
DPH2 DPH2 homolog (S. cerevisiae)
EDC3 enhancer of mRNA decapping 3
ETFA electron-transfer-flavoprotein, alpha polypeptide
ETFB electron-transfer-flavoprotein, beta polypeptide
FTH1 ferritin, heavy polypeptide 1
FXR2 fragile X mental retardation, autosomal homolog 2
GCAT glycine C-acetyltransferase
GTPBP6 GTP binding protein 6 (putative)
HIST1H2APS2 histone cluster 1, H2a, pseudogene 2
IGF2R insulin-like growth factor 2 receptor
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
INTS3 integrator complex subunit 3
ISCA1 iron-sulfur cluster assembly 1
JUN jun proto-oncogene
KIF23 kinesin family member 23
KRT4 keratin 4, type II
LOC105371242 peptidyl-prolyl cis-trans isomerase A-like 4G
LOC105378547 uncharacterized LOC105378547
LPXN leupaxin
MAP1B microtubule-associated protein 1B
MEA1 male-enhanced antigen 1
MED29 mediator complex subunit 29
MFSD10 major facilitator superfamily domain containing 10
MIA2 melanoma inhibitory activity 2
MIR513A1 microRNA 513a-1
MRPS6 mitochondrial ribosomal protein S6
MTCH1 mitochondrial carrier 1
MTFR1 mitochondrial fission regulator 1
NEDD1 neural precursor cell expressed, developmentally down-regulated 1
NFRKB nuclear factor related to kappaB binding protein
NUP188 nucleoporin 188kDa
NUP85 nucleoporin 85kDa
NUP88 nucleoporin 88kDa
ORC3 origin recognition complex, subunit 3
OSBPL8 oxysterol binding protein-like 8
OXCT1 3-oxoacid CoA transferase 1
PBRM1 polybromo 1
PDS5B PDS5 cohesin associated factor B
PET100 PET100 homolog (S. cerevisiae)
PFN2 profilin 2
PGP phosphoglycolate phosphatase
PNO1 partner of NOB1 homolog (S. cerevisiae)
PPIL1 peptidylprolyl isomerase (cyclophilin)-like 1
PRR15 proline rich 15
PSEN1 presenilin 1
PVOP2 Pelvic organ prolapse, susceptibility to, 2
PYROXD2 pyridine nucleotide-disulphide oxidoreductase domain 2
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
RAD18 RAD18 E3 ubiquitin protein ligase
RILPL1 Rab interacting lysosomal protein-like 1
RNF5 ring finger protein 5, E3 ubiquitin protein ligase
RPS27L ribosomal protein S27-like
RPTOR regulatory associated protein of MTOR, complex 1
RSPRY1 ring finger and SPRY domain containing 1
SLC25A4 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4
SMAD3 SMAD family member 3
SMAD5 SMAD family member 5
SMC1B structural maintenance of chromosomes 1B
SPNS1 spinster homolog 1 (Drosophila)
SRC SRC proto-oncogene, non-receptor tyrosine kinase
TCF20 transcription factor 20 (AR1)
TMEM199 transmembrane protein 199
TMOD2 tropomodulin 2 (neuronal)
TRAFD1 TRAF-type zinc finger domain containing 1
TRAPPC6B trafficking protein particle complex 6B
TTC37 tetratricopeptide repeat domain 37
TUB tubby bipartite transcription factor
TUBB4A tubulin, beta 4A class IVa
TUFT1 tuftelin 1
URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
USP11 ubiquitin specific peptidase 11
USP33 ubiquitin specific peptidase 33
ZMYND11 zinc finger, MYND-type containing 11
ZNF512 zinc finger protein 512
ZNF609 zinc finger protein 609