HCC-827 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

41 genes with high or low copy number in HCC-827 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
XPOT exportin, tRNA 3.12177
TBC1D30 TBC1 domain family, member 30 2.93899
TBK1 TANK-binding kinase 1 2.93899
RASSF3 Ras association (RalGDS/AF-6) domain family member 3 2.76305
FLJ41278 uncharacterized LOC400046 2.76305
MIR548Z microRNA 548z 2.76305
TMEM170B transmembrane protein 170B 2.76305
MIR548C microRNA 548c 2.76305
GNS glucosamine (N-acetyl)-6-sulfatase 2.76305
ADTRP androgen-dependent TFPI-regulating protein 2.64759
PI15 peptidase inhibitor 15 2.3178
DTX3 deltex 3, E3 ubiquitin ligase 2.30944
MIR2052 microRNA 2052 2.30944
FLJ39080 2.30944
MIR5681B microRNA 5681b 2.30944
MIR5681A microRNA 5681a 2.30944
JPH1 junctophilin 1 2.30944
PIP4K2C phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 2.30944
GDAP1 ganglioside induced differentiation associated protein 1 2.30944
CDK4 cyclin-dependent kinase 4 2.283
SNORA67 small nucleolar RNA, H/ACA box 67 2.283
SLC26A10 solute carrier family 26, member 10 2.283
TSPAN31 tetraspanin 31 2.283
AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 2.283
ARHGEF25 Rho guanine nucleotide exchange factor (GEF) 25 2.283
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1 2.283
AGAP2-AS1 AGAP2 antisense RNA 1 2.283
HPVC1 human papillomavirus (type 18) E5 central sequence-like 1 2.22793
VSTM2A V-set and transmembrane domain containing 2A 2.22633
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 2.22123
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 2.21727
SEC61G Sec61 gamma subunit 2.21727
EGFR-AS1 EGFR antisense RNA 1 2.21096
EGFR epidermal growth factor receptor 2.20309
KIF5A kinesin family member 5A 2.07776
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 2.0731
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 2.0731

low copy number

Symbol Name Standardized Value
CHRFAM7A CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion -3.47623
DKFZP434L187 uncharacterized LOC26082 -3.47486
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3 -2.80776
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2 -2.73329