HCT15 Gene Set

Dataset CCLE Cell Line Gene Expression Profiles
Category transcriptomics
Type cell line
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Genes

201 genes with high or low expression in HCT15 relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
RGSL1 regulator of G-protein signaling like 1 2.60757
DEC1 deleted in esophageal cancer 1 2.49664
MRPL17 mitochondrial ribosomal protein L17 2.23327
PYCR1 pyrroline-5-carboxylate reductase 1 2.20131
ATP5D ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit 2.1967
TNNC1 troponin C type 1 (slow) 2.04551
AFAP1-AS1 AFAP1 antisense RNA 1 2.01633
CHRNA10 cholinergic receptor, nicotinic, alpha 10 (neuronal) 2.00575
MCAT malonyl CoA:ACP acyltransferase (mitochondrial) 2.00486
MRPS2 mitochondrial ribosomal protein S2 1.96202
PGP phosphoglycolate phosphatase 1.95673
C2ORF47 chromosome 2 open reading frame 47 1.9474
ZNF511 zinc finger protein 511 1.94072
ZNF57 zinc finger protein 57 1.94068
TSSK1B testis-specific serine kinase 1B 1.93885
C19ORF24 chromosome 19 open reading frame 24 1.93815
GDPD3 glycerophosphodiester phosphodiesterase domain containing 3 1.93765
ZFP57 ZFP57 zinc finger protein 1.93079
FAM181A-AS1 FAM181A antisense RNA 1 1.89762
LOC253573 uncharacterized LOC253573 1.88921
CATSPER3 cation channel, sperm associated 3 1.87531
WDR34 WD repeat domain 34 1.87516
PITX2 paired-like homeodomain 2 1.86951
TMEM52B transmembrane protein 52B 1.85759
ATRIP ATR interacting protein 1.8546
LOC284933 uncharacterized LOC284933 1.85028
KCNJ8 potassium channel, inwardly rectifying subfamily J, member 8 1.84601
CDH20 cadherin 20, type 2 1.83765
VPS18 vacuolar protein sorting 18 homolog (S. cerevisiae) 1.82838
TRAV17 T cell receptor alpha variable 17 1.81714
ALDH1B1 aldehyde dehydrogenase 1 family, member B1 1.81649
KIR3DL1 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1 1.76758
TRMU tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase 1.75825
C6ORF203 chromosome 6 open reading frame 203 1.75802
SLC25A10 solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10 1.75454
ABCB1 ATP-binding cassette, sub-family B (MDR/TAP), member 1 1.75439
CARM1 coactivator-associated arginine methyltransferase 1 1.73864
DCP1A decapping mRNA 1A 1.72636
STIP1 stress-induced phosphoprotein 1 1.71552
LINC00474 long intergenic non-protein coding RNA 474 1.71218
TRA2B transformer 2 beta homolog (Drosophila) 1.70444
C1QB complement component 1, q subcomponent, B chain 1.69592
ADAM21 ADAM metallopeptidase domain 21 1.69292
CDPF1 cysteine-rich, DPF motif domain containing 1 1.68653
NR2C2AP nuclear receptor 2C2-associated protein 1.68337
GAL galanin/GMAP prepropeptide 1.67908
TRAPPC4 trafficking protein particle complex 4 1.67119
LHX4 LIM homeobox 4 1.66756
C4BPB complement component 4 binding protein, beta 1.6594
JARID2-AS1 JARID2 antisense RNA 1 1.65696
THRAP3 thyroid hormone receptor associated protein 3 1.64689
AUNIP aurora kinase A and ninein interacting protein 1.64073
TNNT2 troponin T type 2 (cardiac) 1.63939
NOP56 NOP56 ribonucleoprotein 1.63839
GLS2 glutaminase 2 (liver, mitochondrial) 1.63612
TMSB4Y thymosin beta 4, Y-linked 1.63447
IGFL2 IGF-like family member 2 1.62912
SMPDL3B sphingomyelin phosphodiesterase, acid-like 3B 1.62553
MARCH10 membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase 1.61768
AIM1L absent in melanoma 1-like 1.61297
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1 1.58277
GRPEL1 GrpE-like 1, mitochondrial (E. coli) 1.57925
IFNA1 interferon, alpha 1 1.57784
GGT6 gamma-glutamyltransferase 6 1.57136
RRM2 ribonucleotide reductase M2 1.56685
CCBL2 cysteine conjugate-beta lyase 2 1.56422
ZNF205 zinc finger protein 205 1.56067
HES7 hes family bHLH transcription factor 7 1.54967
FAM187B family with sequence similarity 187, member B 1.54022
ACAD9 acyl-CoA dehydrogenase family, member 9 1.52709
NOP9 NOP9 nucleolar protein 1.52504
CEP78 centrosomal protein 78kDa 1.52218
UBXN8 UBX domain protein 8 1.51256
PIH1D1 PIH1 domain containing 1 1.50909
ULBP3 UL16 binding protein 3 1.50692
NOL9 nucleolar protein 9 1.50687
PANK4 pantothenate kinase 4 1.50679
RABL3 RAB, member of RAS oncogene family-like 3 1.5046
FAM9A family with sequence similarity 9, member A 1.49711
MRPL28 mitochondrial ribosomal protein L28 1.49466
VSNL1 visinin-like 1 1.49314
LOC1720 dihydrofolate reductase pseudogene 1.49117
CIRBP-AS1 CIRBP antisense RNA 1 1.48813
PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 1.48197
WDR82 WD repeat domain 82 1.4804
CEP76 centrosomal protein 76kDa 1.4794
EPHA10 EPH receptor A10 1.47124
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 1.46587
ERICH5 glutamate-rich 5 1.46364
POLR3K polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa 1.46271
TAAR1 trace amine associated receptor 1 1.45345
POLR2L polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa 1.43659
HELLS helicase, lymphoid-specific 1.43331
CNTN5 contactin 5 1.4328
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa 1.43229
NEU4 sialidase 4 1.43136
KCNV1 potassium channel, voltage gated modifier subfamily V, member 1 1.42723
NUP88 nucleoporin 88kDa 1.4266
POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) 1.42579
PTPMT1 protein tyrosine phosphatase, mitochondrial 1 1.42235
CENPM centromere protein M 1.41842
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae) 1.41599
U2AF2 U2 small nuclear RNA auxiliary factor 2 1.40871
FAM171B family with sequence similarity 171, member B 1.40865
PRMT1 protein arginine methyltransferase 1 1.40285
ASCL2 achaete-scute family bHLH transcription factor 2 1.40253
LOC100506286 uncharacterized LOC100506286 1.40127
C16ORF46 chromosome 16 open reading frame 46 1.40051
MRPL2 mitochondrial ribosomal protein L2 1.40012
ATAD3B ATPase family, AAA domain containing 3B 1.395
NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 1.39073
ASMT acetylserotonin O-methyltransferase 1.38763
MRPL16 mitochondrial ribosomal protein L16 1.38599
CCDC62 coiled-coil domain containing 62 1.38548
BCL2L12 BCL2-like 12 (proline rich) 1.38523
LOC100129620 uncharacterized LOC100129620 1.38486
BMP4 bone morphogenetic protein 4 1.38483
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 1.38196
GMPPB GDP-mannose pyrophosphorylase B 1.37507
RBM27 RNA binding motif protein 27 1.37214
LMTK3 lemur tyrosine kinase 3 1.37082
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 1.36918
MC2R melanocortin 2 receptor (adrenocorticotropic hormone) 1.36854
TIPIN TIMELESS interacting protein 1.36539
KCNA4 potassium channel, voltage gated shaker related subfamily A, member 4 1.36422
ABHD11 abhydrolase domain containing 11 1.35991
TSSC4 tumor suppressing subtransferable candidate 4 1.35981
KLHL34 kelch-like family member 34 1.35676
SLC25A22 solute carrier family 25 (mitochondrial carrier: glutamate), member 22 1.35653
PELP1 proline, glutamate and leucine rich protein 1 1.35592
NAF1 nuclear assembly factor 1 ribonucleoprotein 1.35567
MANF mesencephalic astrocyte-derived neurotrophic factor 1.35258
CCDC124 coiled-coil domain containing 124 1.3488
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3 1.34723

low expression

Symbol Name Standardized Value
FTSJ1 FtsJ RNA methyltransferase homolog 1 (E. coli) -3.34053
GCM2 glial cells missing homolog 2 (Drosophila) -3.20808
PHOX2B paired-like homeobox 2b -3.02166
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 -2.93292
FAM46D family with sequence similarity 46, member D -2.84669
ZNF354C zinc finger protein 354C -2.69036
SYTL3 synaptotagmin-like 3 -2.65086
PLEKHA8P1 pleckstrin homology domain containing, family A member 8 pseudogene 1 -2.62871
EXO5 exonuclease 5 -2.61766
MRI1 methylthioribose-1-phosphate isomerase 1 -2.47284
DNAH7 dynein, axonemal, heavy chain 7 -2.45082
SLC23A3 solute carrier family 23, member 3 -2.44041
MTERF1 mitochondrial transcription termination factor 1 -2.40875
C19ORF18 chromosome 19 open reading frame 18 -2.33723
SEC31A SEC31 homolog A (S. cerevisiae) -2.32636
ZNF45 zinc finger protein 45 -2.27522
ZNF512B zinc finger protein 512B -2.1709
HEATR5B HEAT repeat containing 5B -2.14174
CD101 CD101 molecule -2.12185
ZNF614 zinc finger protein 614 -2.11895
MSH6 mutS homolog 6 -2.05024
PTPRS protein tyrosine phosphatase, receptor type, S -2.00436
REG1B regenerating islet-derived 1 beta -2.00163
ZNF512 zinc finger protein 512 -1.98817
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -1.94389
ZNF304 zinc finger protein 304 -1.94069
FNBP1 formin binding protein 1 -1.90547
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -1.90324
ANO6 anoctamin 6 -1.90262
ASB11 ankyrin repeat and SOCS box containing 11, E3 ubiquitin protein ligase -1.87879
HIST1H4G histone cluster 1, H4g -1.83357
LOC284294 uncharacterized LOC284294 -1.81907
LINC01549 long intergenic non-protein coding RNA 1549 -1.8031
DICER1 dicer 1, ribonuclease type III -1.76327
MGC16275 uncharacterized protein MGC16275 -1.75892
ZNF75A zinc finger protein 75a -1.74545
SLC39A2 solute carrier family 39 (zinc transporter), member 2 -1.74257
LOC100507194 uncharacterized LOC100507194 -1.67866
CNTD1 cyclin N-terminal domain containing 1 -1.67489
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 -1.66607
YPEL5 yippee-like 5 (Drosophila) -1.64489
ZNF547 zinc finger protein 547 -1.62963
THBS3 thrombospondin 3 -1.62941
EXOC1 exocyst complex component 1 -1.60816
HHAT hedgehog acyltransferase -1.58194
LOC647323 uncharacterized LOC647323 -1.58097
EP300 E1A binding protein p300 -1.57523
PLCXD3 phosphatidylinositol-specific phospholipase C, X domain containing 3 -1.56019
AFAP1L2 actin filament associated protein 1-like 2 -1.55512
SPINT3 serine peptidase inhibitor, Kunitz type, 3 -1.55056
TMEM132B transmembrane protein 132B -1.5353
TTC37 tetratricopeptide repeat domain 37 -1.53529
OR2C1 olfactory receptor, family 2, subfamily C, member 1 -1.52749
C15ORF40 chromosome 15 open reading frame 40 -1.52649
ADGRL4 adhesion G protein-coupled receptor L4 -1.51765
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -1.50754
ZNF134 zinc finger protein 134 -1.50699
KCNE4 potassium channel, voltage gated subfamily E regulatory beta subunit 4 -1.50038
KLHL4 kelch-like family member 4 -1.49913
SLC26A8 solute carrier family 26 (anion exchanger), member 8 -1.49644
MRGPRG-AS1 MRGPRG antisense RNA 1 -1.4918
PHKB phosphorylase kinase, beta -1.49076
ZNF302 zinc finger protein 302 -1.48405
ELOVL5 ELOVL fatty acid elongase 5 -1.47938
ZNF548 zinc finger protein 548 -1.47451
CARTPT CART prepropeptide -1.46444
GRAMD1A GRAM domain containing 1A -1.4576