HI-TOPK-032_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description HI-TOPK-032 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the HI-TOPK-032_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.254417
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.183559
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.155037
VIM vimentin 0.101656
NLGN1 neuroligin 1 0.0967168
CALR calreticulin 0.0878719
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0865884
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.082528
RRM2 ribonucleotide reductase M2 0.0759372
CANX calnexin 0.0744666
PDIA6 protein disulfide isomerase family A, member 6 0.0718063
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.068447
YAP1 Yes-associated protein 1 0.0652393
MKI67 marker of proliferation Ki-67 0.0625925
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0585061
BIRC3 baculoviral IAP repeat containing 3 0.0574544
TMSB10 thymosin beta 10 0.0566218
SMC4 structural maintenance of chromosomes 4 0.0560334
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0541577
RPS12 ribosomal protein S12 0.0535935
RPS6 ribosomal protein S6 0.0528342
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0505108
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.050455
RTN4 reticulon 4 0.0498221
TPT1 tumor protein, translationally-controlled 1 0.0484885
FNDC3B fibronectin type III domain containing 3B 0.0455934
HMGA2 high mobility group AT-hook 2 0.0440197
TPM3 tropomyosin 3 0.0436574
WWOX WW domain containing oxidoreductase 0.0432345
PDIA3 protein disulfide isomerase family A, member 3 0.0427949
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0417023
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 0.0406269
ANKRD12 ankyrin repeat domain 12 0.0392466
CCN2 cellular communication network factor 2 0.038194
PDIA4 protein disulfide isomerase family A, member 4 0.0376883
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0373315
DNAJB11 DnaJ (Hsp40) homolog, subfamily B, member 11 0.0366025
XPOT exportin, tRNA 0.0365669
SETX senataxin 0.035173
RPS19 ribosomal protein S19 0.035028
EIF5 eukaryotic translation initiation factor 5 0.0349452
TUBA1B tubulin, alpha 1b 0.0345338
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0343315
NEGR1 neuronal growth regulator 1 0.033877
HYOU1 hypoxia up-regulated 1 0.0335221
TPI1 triosephosphate isomerase 1 0.03335
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0325556
ASPH aspartate beta-hydroxylase 0.0325543
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0325236
LRMDA leucine rich melanocyte differentiation associated 0.0319899
PFN1 profilin 1 0.0317363
RPS8 ribosomal protein S8 0.0314758
SRRM2 serine/arginine repetitive matrix 2 0.0309936
YBX1 Y box binding protein 1 0.0302817
DIAPH3 diaphanous-related formin 3 0.0300683
JMJD1C jumonji domain containing 1C 0.0298932
NALF1 NALCN channel auxiliary factor 1 0.0295496
TMEM41B transmembrane protein 41B 0.0290548
HDGF hepatoma-derived growth factor 0.0284895
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0283421
HSPA8 heat shock 70kDa protein 8 0.0282768
RPL3 ribosomal protein L3 0.028244
RPL9 ribosomal protein L9 0.0279052
PTMS parathymosin 0.0278488
SMC1A structural maintenance of chromosomes 1A 0.0276071
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0275807
PCBP2 poly(rC) binding protein 2 0.0272336
UBC ubiquitin C 0.0270914
POTEF POTE ankyrin domain family, member F 0.0269172
ACTG1 actin gamma 1 0.0268169
LGALS12 lectin, galactoside-binding, soluble, 12 0.0266983
MAP1B microtubule-associated protein 1B 0.0264438
ENO1 enolase 1, (alpha) 0.0262804
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0262755
WDPCP WD repeat containing planar cell polarity effector 0.0260713
RPL37A ribosomal protein L37a 0.0260389
RPL37 ribosomal protein L37 0.026029
RPS27A ribosomal protein S27a 0.025945
RPLP2 ribosomal protein, large, P2 0.0258363
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0257145
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0255029
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0253654
PCM1 pericentriolar material 1 0.0253145
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0252052
GOLGA4 golgin A4 0.0250916
PRELID2 PRELI domain containing 2 0.0249527
EEF2 eukaryotic translation elongation factor 2 0.0248018
RPL23 ribosomal protein L23 0.0245911
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0244517
GOLGB1 golgin B1 0.0243235
PCDH7 protocadherin 7 0.024073
MYO10 myosin X 0.0238678
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0236418
PTMA prothymosin, alpha 0.0234467
KTN1 kinectin 1 (kinesin receptor) 0.0234223
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0233226
SET SET nuclear proto-oncogene 0.0232168
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.022784
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0226541
HSPH1 heat shock 105kDa/110kDa protein 1 0.022366

decreased expression

Symbol Name Standardized Value
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0888939
CELF2 CUGBP, Elav-like family member 2 -0.0847672
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0818884
CLDN1 claudin 1 -0.0737309
BIRC6 baculoviral IAP repeat containing 6 -0.0647095
DPYD dihydropyrimidine dehydrogenase -0.0634951
MMP12 matrix metallopeptidase 12 -0.0616381
ZBTB20 zinc finger and BTB domain containing 20 -0.0616081
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0610991
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0579323
RERE arginine-glutamic acid dipeptide (RE) repeats -0.05728
NEBL nebulette -0.0567632
DST dystonin -0.0554407
LMO7 LIM domain 7 -0.0545945
EHBP1 EH domain binding protein 1 -0.0545886
DLC1 DLC1 Rho GTPase activating protein -0.0542884
AHNAK AHNAK nucleoprotein -0.0518258
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0517963
RASAL2 RAS protein activator like 2 -0.0472212
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0466065
TAS2R14 taste receptor, type 2, member 14 -0.0457923
PEG10 paternally expressed 10 -0.0451332
NF1 neurofibromin 1 -0.0447279
SYT1 synaptotagmin I -0.0435562
SNCA synuclein, alpha (non A4 component of amyloid precursor) -0.0434068
SLC38A2 solute carrier family 38, member 2 -0.0431674
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0406623
CMIP c-Maf inducing protein -0.0402436
ADGRG6 adhesion G protein-coupled receptor G6 -0.0391794
TENM3 teneurin transmembrane protein 3 -0.0385757
ANKRD28 ankyrin repeat domain 28 -0.0385365
CARD16 caspase recruitment domain family, member 16 -0.0377636
USP34 ubiquitin specific peptidase 34 -0.0377304
TMEM131 transmembrane protein 131 -0.0377071
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0373292
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0370587
RAD21 RAD21 homolog (S. pombe) -0.0362981
ELP4 elongator acetyltransferase complex subunit 4 -0.0359262
ARB2A ARB2 cotranscriptional regulator A -0.0348756
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0341158
MTAP methylthioadenosine phosphorylase -0.0329663
ITSN1 intersectin 1 (SH3 domain protein) -0.0321828
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0320894
ATP5F1B ATP synthase F1 subunit beta -0.0318976
RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1 -0.031438
ZNF217 zinc finger protein 217 -0.0313888
NCOR1 nuclear receptor corepressor 1 -0.0313119
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0310336
NABP1 nucleic acid binding protein 1 -0.0308738
CXADR coxsackie virus and adenovirus receptor -0.0302664
P3H2 prolyl 3-hydroxylase 2 -0.0299689
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0293537
RAB10 RAB10, member RAS oncogene family -0.0292976
CDK6 cyclin-dependent kinase 6 -0.0290788
GSK3B glycogen synthase kinase 3 beta -0.0288139
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0285885
IFIH1 interferon induced with helicase C domain 1 -0.0284305
LARS1 leucyl-tRNA synthetase 1 -0.0282522
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0282112
RIMKLB ribosomal modification protein rimK-like family member B -0.0280528
GCG glucagon -0.0279738
TSPAN5 tetraspanin 5 -0.027893
NHSL1 NHS-like 1 -0.0273663
RNF13 ring finger protein 13 -0.02727
PDE4D phosphodiesterase 4D, cAMP-specific -0.0270829
WDR43 WD repeat domain 43 -0.0269307
THOC2 THO complex 2 -0.0269052
LARP1 La ribonucleoprotein domain family, member 1 -0.0264542
CAMKMT calmodulin-lysine N-methyltransferase -0.0264456
SBF2 SET binding factor 2 -0.0258662
ZNF804A zinc finger protein 804A -0.0258481
FSTL5 follistatin-like 5 -0.0256932
ACBD6 acyl-CoA binding domain containing 6 -0.0255762
MARCHF6 membrane associated ring-CH-type finger 6 -0.0255534
NEK7 NIMA-related kinase 7 -0.025526
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0254502
PGK1 phosphoglycerate kinase 1 -0.0252993
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0251362
NPC1 Niemann-Pick disease, type C1 -0.0249542
TSC22D2 TSC22 domain family, member 2 -0.0249193
SMYD3 SET and MYND domain containing 3 -0.0246757
VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) -0.0246375
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0243504
SOS1 son of sevenless homolog 1 (Drosophila) -0.024307
PATJ PATJ crumbs cell polarity complex component -0.0241875
SPIDR scaffolding protein involved in DNA repair -0.0240342
ZNF407 zinc finger protein 407 -0.0239279
CDK17 cyclin-dependent kinase 17 -0.0238945
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0237725
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.023532
FBXL20 F-box and leucine-rich repeat protein 20 -0.0235316
R3HDM1 R3H domain containing 1 -0.0232937
UBE2K ubiquitin-conjugating enzyme E2K -0.0232198
SRPK2 SRSF protein kinase 2 -0.0226087
MED13L mediator complex subunit 13-like -0.0225598
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0222639
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0222238
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 -0.0220241
PRRC2B proline-rich coiled-coil 2B -0.0220145
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0218677