HI-TOPK-032_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description HI-TOPK-032 perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the HI-TOPK-032_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.190335
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.11608
TPT1 tumor protein, translationally-controlled 1 0.0632328
HSPA8 heat shock 70kDa protein 8 0.0492983
RPS12 ribosomal protein S12 0.0484992
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0444229
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0426983
ONECUT3 one cut homeobox 3 0.0423755
PDE4D phosphodiesterase 4D, cAMP-specific 0.0363372
MYO1E myosin IE 0.0355041
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0354763
FHIT fragile histidine triad 0.0346521
ACTG1 actin gamma 1 0.0312673
EGFR epidermal growth factor receptor 0.0306322
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0293875
H1-0 H1.0 linker histone 0.0282016
EXT1 exostosin glycosyltransferase 1 0.0276008
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0273859
RPLP2 ribosomal protein, large, P2 0.0271442
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0269981
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0264625
RPS27A ribosomal protein S27a 0.0259551
PARD3B par-3 family cell polarity regulator beta 0.0242974
MUC13 mucin 13, cell surface associated 0.0234603
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.02325
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0230527
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0230286
RPS8 ribosomal protein S8 0.0226974
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0226797
LOC102724023 ES1 protein homolog, mitochondrial 0.0225545
RPS6 ribosomal protein S6 0.0218721
DST dystonin 0.0217355
RPS17 ribosomal protein S17 0.021539
CADPS Ca++-dependent secretion activator 0.0214889
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0207404
RIGI RNA sensor RIG-I 0.0205859
CEMIP cell migration inducing protein, hyaluronan binding 0.020464
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0203618
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0203421
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.020335
RAD51B RAD51 paralog B 0.020301
CCSER1 coiled-coil serine-rich protein 1 0.0201842
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0197686
LURAP1L leucine rich adaptor protein 1-like 0.0196141
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0194349
PTPRG protein tyrosine phosphatase, receptor type, G 0.0194031
RPL38 ribosomal protein L38 0.0193269
KLF5 Kruppel-like factor 5 (intestinal) 0.0192042
PCDH9 protocadherin 9 0.0189346
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0186555
HSPH1 heat shock 105kDa/110kDa protein 1 0.0180502
TRAPPC9 trafficking protein particle complex 9 0.0178442
ZBTB20 zinc finger and BTB domain containing 20 0.0176634
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0175907
SRRM2 serine/arginine repetitive matrix 2 0.017391
SMC1A structural maintenance of chromosomes 1A 0.0173566
MTAP methylthioadenosine phosphorylase 0.0173139
MKI67 marker of proliferation Ki-67 0.0172311
SQSTM1 sequestosome 1 0.0171245
SOX9 SRY (sex determining region Y)-box 9 0.0169312
VCL vinculin 0.0168858
AKAP12 A kinase (PRKA) anchor protein 12 0.0168083
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0167653
FOXP1 forkhead box P1 0.0165943
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 0.016572
WWOX WW domain containing oxidoreductase 0.0165364
PDE10A phosphodiesterase 10A 0.0161919
RPL36A ribosomal protein L36a 0.0160755
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.015699
ALCAM activated leukocyte cell adhesion molecule 0.0154198
CCND1 cyclin D1 0.0154166
RPL9 ribosomal protein L9 0.0153938
PDZD8 PDZ domain containing 8 0.0153804
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0152189
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.015145
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.014953
H1-4 H1.4 linker histone, cluster member 0.0149438
SET SET nuclear proto-oncogene 0.0149066
EXOC4 exocyst complex component 4 0.0148305
BMAL2 basic helix-loop-helix ARNT like 2 0.0148296
FLNA filamin A, alpha 0.0145628
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0145156
DOCK1 dedicator of cytokinesis 1 0.0143083
NCEH1 neutral cholesterol ester hydrolase 1 0.0141775
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0141371
ASB4 ankyrin repeat and SOCS box containing 4 0.0140045
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0139934
MARCHF3 membrane associated ring-CH-type finger 3 0.013913
TGFBR3 transforming growth factor, beta receptor III 0.0138934
OASL 2'-5'-oligoadenylate synthetase-like 0.0138108
RPL37A ribosomal protein L37a 0.0137896
SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 0.0137696
CD44 CD44 molecule (Indian blood group) 0.0137453
HSPE1 heat shock 10kDa protein 1 0.0137192
SAMD5 sterile alpha motif domain containing 5 0.0136906
SP100 SP100 nuclear antigen 0.0136603
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0136464
RPL26 ribosomal protein L26 0.0136431
TMSB4X thymosin beta 4, X-linked 0.0135537
TUBA1B tubulin, alpha 1b 0.0135008

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.206527
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.178885
MUC6 mucin 6, oligomeric mucus/gel-forming -0.161672
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.109539
GOLGA4 golgin A4 -0.101159
NDRG1 N-myc downstream regulated 1 -0.100665
ANXA2 annexin A2 -0.0996599
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0935547
ITGA6 integrin, alpha 6 -0.0910731
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0820465
FTH1 ferritin, heavy polypeptide 1 -0.0783194
TXNIP thioredoxin interacting protein -0.0760199
LDHA lactate dehydrogenase A -0.0747809
FAM13A family with sequence similarity 13, member A -0.0741057
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.073129
ESYT2 extended synaptotagmin-like protein 2 -0.0704953
ZFAND3 zinc finger, AN1-type domain 3 -0.0690946
NCOR1 nuclear receptor corepressor 1 -0.0684647
RNF145 ring finger protein 145 -0.0656699
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0630155
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0629732
MED13L mediator complex subunit 13-like -0.0621615
BIRC6 baculoviral IAP repeat containing 6 -0.0609884
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0603158
FLNB filamin B, beta -0.0593729
UBA6 ubiquitin-like modifier activating enzyme 6 -0.058552
HMGA1 high mobility group AT-hook 1 -0.0580794
RAB1A RAB1A, member RAS oncogene family -0.0579375
SEC31A SEC31 homolog A (S. cerevisiae) -0.057728
SETD5 SET domain containing 5 -0.0566546
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0558587
WDR45B WD repeat domain 45B -0.0558196
EZR ezrin -0.0556851
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0555507
PTEN phosphatase and tensin homolog -0.0554963
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0535792
RBM39 RNA binding motif protein 39 -0.0535064
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.053375
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0522614
IARS1 isoleucyl-tRNA synthetase 1 -0.0515947
MBNL2 muscleblind-like splicing regulator 2 -0.0515271
INSIG1 insulin induced gene 1 -0.0510112
S100P S100 calcium binding protein P -0.0508697
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0506646
MON2 MON2 homolog (S. cerevisiae) -0.0504239
CCNY cyclin Y -0.0499229
LOC112694756 uncharaterized LOC112694756 -0.0499203
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0493987
GARS1 glycyl-tRNA synthetase 1 -0.0493621
GDF15 growth differentiation factor 15 -0.0492841
GPHN gephyrin -0.0486815
WAC WW domain containing adaptor with coiled-coil -0.0485774
TTC3 tetratricopeptide repeat domain 3 -0.0484941
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0467069
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0465008
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0465
TMSB10 thymosin beta 10 -0.0459683
CD46 CD46 molecule, complement regulatory protein -0.0446458
PGK1 phosphoglycerate kinase 1 -0.0443216
SBF2 SET binding factor 2 -0.0440794
FNBP1L formin binding protein 1-like -0.0439753
OGA O-GlcNAcase -0.0439586
ANKRD17 ankyrin repeat domain 17 -0.0439582
FNDC3B fibronectin type III domain containing 3B -0.0435545
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0434394
GSK3B glycogen synthase kinase 3 beta -0.0434153
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0430305
CALB1 calbindin 1, 28kDa -0.0424901
DSCAM Down syndrome cell adhesion molecule -0.0424381
SREBF2 sterol regulatory element binding transcription factor 2 -0.0422476
COG5 component of oligomeric golgi complex 5 -0.0422347
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0420477
COPA coatomer protein complex, subunit alpha -0.041398
ANKRD11 ankyrin repeat domain 11 -0.0411147
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0404887
PPARG peroxisome proliferator-activated receptor gamma -0.0401407
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0398809
GCC2 GRIP and coiled-coil domain containing 2 -0.0398727
USP3 ubiquitin specific peptidase 3 -0.0398685
GLG1 golgi glycoprotein 1 -0.0395917
EXOC1 exocyst complex component 1 -0.0395404
RAB6A RAB6A, member RAS oncogene family -0.0391916
KDM3A lysine (K)-specific demethylase 3A -0.0385545
TFG TRK-fused gene -0.0384956
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0382542
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0381335
ZMYM2 zinc finger, MYM-type 2 -0.0377858
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0377202
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0376571
NFIA nuclear factor I/A -0.0376495
ZNF292 zinc finger protein 292 -0.0375109
DDIT4 DNA-damage-inducible transcript 4 -0.0372776
STRN3 striatin, calmodulin binding protein 3 -0.0371791
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0370455
MED13 mediator complex subunit 13 -0.0370193
MUC17 mucin 17, cell surface associated -0.035902
PERP PERP, TP53 apoptosis effector -0.0356374
BTBD9 BTB (POZ) domain containing 9 -0.0355252
ITGB4 integrin, beta 4 -0.0353708
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.03507