HI-TOPK-032_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description HI-TOPK-032 perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the HI-TOPK-032_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.153487
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.118212
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0647783
TPM3 tropomyosin 3 0.059351
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0560078
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0451356
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0433788
MKI67 marker of proliferation Ki-67 0.039944
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0390977
PRELID2 PRELI domain containing 2 0.0385638
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0384547
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0351867
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0343508
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0341968
SRRM2 serine/arginine repetitive matrix 2 0.0341259
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0340742
CENPF centromere protein F, 350/400kDa 0.0310214
PTMA prothymosin, alpha 0.0302916
IFI6 interferon, alpha-inducible protein 6 0.029569
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0294553
GOLGB1 golgin B1 0.0283942
HSPA8 heat shock 70kDa protein 8 0.0273482
CALR calreticulin 0.0270603
UBC ubiquitin C 0.0264572
TRIP12 thyroid hormone receptor interactor 12 0.0264403
DSPP dentin sialophosphoprotein 0.0264256
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0260703
HDGF hepatoma-derived growth factor 0.0259011
PDIA6 protein disulfide isomerase family A, member 6 0.0251114
BBX bobby sox homolog (Drosophila) 0.0245868
HLA-B major histocompatibility complex, class I, B 0.0242562
CANX calnexin 0.0240535
AKAP9 A kinase (PRKA) anchor protein 9 0.024032
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0233486
HSPH1 heat shock 105kDa/110kDa protein 1 0.0227051
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0224953
RSL1D1 ribosomal L1 domain containing 1 0.0222687
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0218323
XPOT exportin, tRNA 0.0217497
KPNB1 karyopherin (importin) beta 1 0.0215298
ERRFI1 ERBB receptor feedback inhibitor 1 0.0213603
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0211571
NAP1L1 nucleosome assembly protein 1-like 1 0.0210478
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0210432
CTTN cortactin 0.020997
TPM4 tropomyosin 4 0.0208713
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.020347
IER3 immediate early response 3 0.0197255
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0190846
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0189706
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0188391
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0186048
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0184297
SRP72 signal recognition particle 72kDa 0.0184291
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0180945
SGO2 shugoshin 2 0.0180143
HDLBP high density lipoprotein binding protein 0.0178976
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0175804
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.0173875
CSDE1 cold shock domain containing E1, RNA-binding 0.0173559
NFE2L1 nuclear factor, erythroid 2-like 1 0.017028
SSB Sjogren syndrome antigen B (autoantigen La) 0.016915
VCP valosin containing protein 0.0169062
DST dystonin 0.0168685
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0168405
PDIA4 protein disulfide isomerase family A, member 4 0.0166545
UBB ubiquitin B 0.0165927
ESYT2 extended synaptotagmin-like protein 2 0.0163202
CIP2A cellular inhibitor of PP2A 0.0162169
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0161909
S100A10 S100 calcium binding protein A10 0.0159548
AEBP2 AE binding protein 2 0.0159201
AFF3 AF4/FMR2 family, member 3 0.0159013
SET SET nuclear proto-oncogene 0.0158714
METTL21A methyltransferase like 21A 0.0158146
TUBA1B tubulin, alpha 1b 0.0157733
DNAJC2 DnaJ (Hsp40) homolog, subfamily C, member 2 0.0157151
SMC4 structural maintenance of chromosomes 4 0.0155835
WWOX WW domain containing oxidoreductase 0.0155687
TPX2 TPX2, microtubule-associated 0.0155007
KMT5B lysine methyltransferase 5B 0.0154681
MTERF1 mitochondrial transcription termination factor 1 0.0154473
TPR translocated promoter region, nuclear basket protein 0.015263
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0151265
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0151206
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0151168
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.015006
PRKCE protein kinase C, epsilon 0.0149735
H1-3 H1.3 linker histone, cluster member 0.0149327
ADAR adenosine deaminase, RNA-specific 0.0146778
GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 0.0146707
PRC1 protein regulator of cytokinesis 1 0.0146026
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0144816
ICAM1 intercellular adhesion molecule 1 0.0144429
SMC1A structural maintenance of chromosomes 1A 0.0144095
KIF4A kinesin family member 4A 0.0144044
STC1 stanniocalcin 1 0.0143411
STIP1 stress-induced phosphoprotein 1 0.014098
JMJD1C jumonji domain containing 1C 0.013942
ENO1 enolase 1, (alpha) 0.0138942

decreased expression

Symbol Name Standardized Value
TFPI2 tissue factor pathway inhibitor 2 -0.122492
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.113019
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.096564
TXNRD1 thioredoxin reductase 1 -0.0932636
VIM vimentin -0.0918432
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.080926
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0610546
NABP1 nucleic acid binding protein 1 -0.0602999
EGR1 early growth response 1 -0.0600978
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0563084
EXT1 exostosin glycosyltransferase 1 -0.0521735
EML4 echinoderm microtubule associated protein like 4 -0.0499434
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.048489
VCL vinculin -0.0426213
RPLP1 ribosomal protein, large, P1 -0.0425006
RPS21 ribosomal protein S21 -0.0416561
OSMR oncostatin M receptor -0.0407881
MCL1 myeloid cell leukemia 1 -0.0403224
GPHN gephyrin -0.0403205
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0400049
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0399323
ZBTB20 zinc finger and BTB domain containing 20 -0.0393663
RTN4 reticulon 4 -0.0381063
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0379575
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0366258
GATAD2B GATA zinc finger domain containing 2B -0.0357206
WNK1 WNK lysine deficient protein kinase 1 -0.0352567
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0351936
POTEF POTE ankyrin domain family, member F -0.0347888
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0344396
CDK17 cyclin-dependent kinase 17 -0.033705
SLC38A2 solute carrier family 38, member 2 -0.0329872
RPS27 ribosomal protein S27 -0.0327609
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0324926
DOCK5 dedicator of cytokinesis 5 -0.0315173
RPLP0 ribosomal protein, large, P0 -0.030975
TRIO trio Rho guanine nucleotide exchange factor -0.0307651
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0299763
PDE10A phosphodiesterase 10A -0.029864
GRAMD1B GRAM domain containing 1B -0.0293091
LRRC23 leucine rich repeat containing 23 -0.02922
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0289102
ETNK1 ethanolamine kinase 1 -0.028531
BIRC6 baculoviral IAP repeat containing 6 -0.0284811
RPS29 ribosomal protein S29 -0.0280785
LATS2 large tumor suppressor kinase 2 -0.0278068
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0277525
UBE2H ubiquitin-conjugating enzyme E2H -0.027443
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0269311
BCAS3 breast carcinoma amplified sequence 3 -0.0267613
USP34 ubiquitin specific peptidase 34 -0.0264014
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0262973
TMSB10 thymosin beta 10 -0.0262896
TIAM1 T-cell lymphoma invasion and metastasis 1 -0.0261735
WDR70 WD repeat domain 70 -0.0260252
SRPK2 SRSF protein kinase 2 -0.025792
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0252772
VMP1 vacuole membrane protein 1 -0.0252005
SMYD3 SET and MYND domain containing 3 -0.0249221
IGF1R insulin-like growth factor 1 receptor -0.0247057
FMNL2 formin-like 2 -0.0245481
BICD1 bicaudal D homolog 1 (Drosophila) -0.0240589
BRD2 bromodomain containing 2 -0.0240283
RPL35A ribosomal protein L35a -0.0239832
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.023891
BASP1 brain abundant, membrane attached signal protein 1 -0.0237871
RUSC2 RUN and SH3 domain containing 2 -0.0236851
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0235627
JAK1 Janus kinase 1 -0.0235615
RAB10 RAB10, member RAS oncogene family -0.0233305
CALD1 caldesmon 1 -0.0233209
WSB1 WD repeat and SOCS box containing 1 -0.0229764
ITSN1 intersectin 1 (SH3 domain protein) -0.0226718
PUM2 pumilio RNA-binding family member 2 -0.0226623
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0225787
LOC112694756 uncharaterized LOC112694756 -0.0223982
SBF2 SET binding factor 2 -0.0222121
ZNF638 zinc finger protein 638 -0.0219237
RPL28 ribosomal protein L28 -0.021882
AP1S3 adaptor-related protein complex 1, sigma 3 subunit -0.0217128
ATP5F1B ATP synthase F1 subunit beta -0.0216266
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0213801
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0212934
PCLO piccolo presynaptic cytomatrix protein -0.0209193
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0208897
RPS12 ribosomal protein S12 -0.0207835
GSK3B glycogen synthase kinase 3 beta -0.0207139
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0206108
WWTR1 WW domain containing transcription regulator 1 -0.0204845
SFPQ splicing factor proline/glutamine-rich -0.0204323
TMEM165 transmembrane protein 165 -0.020424
ANKRD17 ankyrin repeat domain 17 -0.0201297
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.020113
PTK2 protein tyrosine kinase 2 -0.0199656
ANKRD28 ankyrin repeat domain 28 -0.019862
TPI1 triosephosphate isomerase 1 -0.0196481
ZFAND3 zinc finger, AN1-type domain 3 -0.0196155
TEX14 testis expressed 14 -0.0193956
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0192752
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.019231