HMGA2 Gene Set

Dataset MSigDB Cancer Gene Co-expression Modules
Category transcriptomics
Type co-expressed gene
Description high mobility group AT-hook 2|This gene encodes a protein that belongs to the non-histone chromosomal high mobility group (HMG) protein family. HMG proteins function as architectural factors and are essential components of the enhancesome. This protein contains structural DNA-binding domains and may act as a transcriptional regulating factor. Identification of the deletion, amplification, and rearrangement of this gene that are associated with myxoid liposarcoma suggests a role in adipogenesis and mesenchymal differentiation. A gene knock out study of the mouse counterpart demonstrated that this gene is involved in diet-induced obesity. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008] (NCBI Entrez Gene Database, 8091)
External Link http://www.broadinstitute.org/gsea/msigdb/cards/GCM_HMGA2
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Genes

122 co-expressed genes for HMGA2 from the MSigDB Cancer Gene Co-expression Modules dataset.

Symbol Name
AANAT aralkylamine N-acetyltransferase
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1
ADCYAP1 adenylate cyclase activating polypeptide 1 (pituitary)
ADORA2A adenosine A2a receptor
AGER advanced glycosylation end product-specific receptor
APOC3 apolipoprotein C-III
AQP7 aquaporin 7
ASMT acetylserotonin O-methyltransferase
AVPR1B arginine vasopressin receptor 1B
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
BDH1 3-hydroxybutyrate dehydrogenase, type 1
BNIP1 BCL2/adenovirus E1B 19kDa interacting protein 1
CCL2 chemokine (C-C motif) ligand 2
CCR9 chemokine (C-C motif) receptor 9
CD8B CD8b molecule
CDH5 cadherin 5, type 2 (vascular endothelium)
CDSN corneodesmosin
CENPI centromere protein I
CHIC1 cysteine-rich hydrophobic domain 1
CHRM5 cholinergic receptor, muscarinic 5
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
CLCN1 chloride channel, voltage-sensitive 1
COL14A1 collagen, type XIV, alpha 1
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor
CSN2 casein beta
CSN3 casein kappa
CSPG4 chondroitin sulfate proteoglycan 4
CTLA4 cytotoxic T-lymphocyte-associated protein 4
CYP2F1 cytochrome P450, family 2, subfamily F, polypeptide 1
DGCR6 DiGeorge syndrome critical region gene 6
DPF2 D4, zinc and double PHD fingers family 2
DRD1 dopamine receptor D1
DRG2 developmentally regulated GTP binding protein 2
DTX2P1-UPK3BP1-PMS2P11 DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene
EBI3 Epstein-Barr virus induced 3
ELK4 ELK4, ETS-domain protein (SRF accessory protein 1)
ERCC4 excision repair cross-complementation group 4
FABP3 fatty acid binding protein 3, muscle and heart
FANCC Fanconi anemia, complementation group C
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32)
FCGR2B Fc fragment of IgG, low affinity IIb, receptor (CD32)
FEV FEV (ETS oncogene family)
FHL3 four and a half LIM domains 3
FUT2 fucosyltransferase 2 (secretor status included)
GABRQ gamma-aminobutyric acid (GABA) A receptor, theta
GCK glucokinase (hexokinase 4)
GCM1 glial cells missing homolog 1 (Drosophila)
GH2 growth hormone 2
GHRHR growth hormone releasing hormone receptor
GJA5 gap junction protein, alpha 5, 40kDa
GPR3 G protein-coupled receptor 3
GRIN2C glutamate receptor, ionotropic, N-methyl D-aspartate 2C
GRM4 glutamate receptor, metabotropic 4
GSTZ1 glutathione S-transferase zeta 1
HCG8 HLA complex group 8
HMGA2 high mobility group AT-hook 2
HTR1E 5-hydroxytryptamine (serotonin) receptor 1E, G protein-coupled
HTR2C 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled
IFNA21 interferon, alpha 21
IGKV7-3 immunoglobulin kappa variable 7-3 (pseudogene)
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
IRF5 interferon regulatory factor 5
ITSN1 intersectin 1 (SH3 domain protein)
KCNA6 potassium channel, voltage gated shaker related subfamily A, member 6
KIAA0195 KIAA0195
KRT31 keratin 31, type I
KRT32 keratin 32, type I
KRT35 keratin 35, type I
KRT83 keratin 83, type II
L1CAM L1 cell adhesion molecule
LEP leptin
LYST lysosomal trafficking regulator
MADD MAP-kinase activating death domain
MICB MHC class I polypeptide-related sequence B
MMP19 matrix metallopeptidase 19
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
MVK mevalonate kinase
MYBPC2 myosin binding protein C, fast type
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
MYH7 myosin, heavy chain 7, cardiac muscle, beta
NDUFA1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa
NEFL neurofilament, light polypeptide
NGFR nerve growth factor receptor
NR2C1 nuclear receptor subfamily 2, group C, member 1
NR4A3 nuclear receptor subfamily 4, group A, member 3
NRF1 nuclear respiratory factor 1
ODF1 outer dense fiber of sperm tails 1
PDE6B phosphodiesterase 6B, cGMP-specific, rod, beta
PLK1 polo-like kinase 1
PNMT phenylethanolamine N-methyltransferase
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit
PRKCG protein kinase C, gamma
PSG7 pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)
PTPN5 protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
PTPRU protein tyrosine phosphatase, receptor type, U
RABGGTA Rab geranylgeranyltransferase, alpha subunit
RENBP renin binding protein
RING1 ring finger protein 1
SCNN1G sodium channel, non voltage gated 1 gamma subunit
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4
SIRPB1 signal-regulatory protein beta 1
SLC14A2 solute carrier family 14 (urea transporter), member 2
SLC17A2 solute carrier family 17, member 2
SLC18A1 solute carrier family 18 (vesicular monoamine transporter), member 1
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4
SLC30A3 solute carrier family 30 (zinc transporter), member 3
SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
SSTR3 somatostatin receptor 3
STAT4 signal transducer and activator of transcription 4
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae)
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa
TMEM106A transmembrane protein 106A
TRIM15 tripartite motif containing 15
TRIP13 thyroid hormone receptor interactor 13
TUB tubby bipartite transcription factor
UROD uroporphyrinogen decarboxylase
VAV1 vav 1 guanine nucleotide exchange factor
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae)
WAS Wiskott-Aldrich syndrome
ZNF132 zinc finger protein 132
ZNF8 zinc finger protein 8