HOXA9 Gene Set

Dataset JASPAR Predicted Human Transcription Factor Targets 2025
Category genomics
Type transcription factor
Description homeobox A9|In vertebrates, the genes encoding the class of transcription factors called homeobox genes are found in clusters named A, B, C, and D on four separate chromosomes. Expression of these proteins is spatially and temporally regulated during embryonic development. This gene is part of the A cluster on chromosome 7 and encodes a DNA-binding transcription factor which may regulate gene expression, morphogenesis, and differentiation. This gene is highly similar to the abdominal-B (Abd-B) gene of Drosophila. A specific translocation event which causes a fusion between this gene and the NUP98 gene has been associated with myeloid leukemogenesis. Read-through transcription exists between this gene and the upstream homeobox A10 (HOXA10) gene.[provided by RefSeq, Mar 2011] (NCBI Entrez Gene Database, 3205)
External Link https://ncbi.nlm.nih.gov/gene/3205
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Genes

78 target genes of the HOXA9 transcription factor predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.

Symbol Name Standardized Value
TFDP3 transcription factor Dp family, member 3 45.3183
H4C15 H4 clustered histone 15 37.4138
PRR20E proline rich 20E 22.6443
HOXB5 homeobox B5 19.5466
ISY1-RAB43 ISY1-RAB43 readthrough 19.5449
SAP18 Sin3A-associated protein, 18kDa 19.3518
CAND1 cullin-associated and neddylation-dissociated 1 19.2747
GDI1 GDP dissociation inhibitor 1 18.6743
KLF18 KLF transcription factor 18 18.4252
H2AC11 H2A clustered histone 11 18.3638
RPL9 ribosomal protein L9 18.3578
LIAS lipoic acid synthetase 18.3578
CCNH cyclin H 18.2038
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 14.6947
PLD3 phospholipase D family, member 3 14.5556
RBM25 RNA binding motif protein 25 14.5475
SRSF9 serine/arginine-rich splicing factor 9 14.5256
H2BC4 H2B clustered histone 4 14.4667
FUBP1 far upstream element (FUSE) binding protein 1 14.4501
DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 14.4501
GIPC2 GIPC PDZ domain containing family, member 2 14.4501
OIP5 Opa interacting protein 5 14.442
EIF3D eukaryotic translation initiation factor 3, subunit D 14.4356
ELOVL5 ELOVL fatty acid elongase 5 14.4135
FAM90A19 family with sequence similarity 90 member A19 14.3868
FAM90A10 family with sequence similarity 90 member A10 14.3868
IFT52 intraflagellar transport 52 14.3787
EIF3H eukaryotic translation initiation factor 3, subunit H 14.3432
FAM114A2 family with sequence similarity 114, member A2 14.1851
MFAP3 microfibrillar-associated protein 3 14.1851
XAGE1A X antigen family member 1A 14.1702
GDNF glial cell derived neurotrophic factor 14.1608
TBPL1 TBP-like 1 14.1446
KRT222 keratin 222, type II 14.1351
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 14.0892
TTC1 tetratricopeptide repeat domain 1 14.0749
C2CD3 C2 calcium-dependent domain containing 3 14.0708
TFCP2 transcription factor CP2 14.0565
DRAM2 DNA-damage regulated autophagy modulator 2 14.0497
CDKL2 cyclin-dependent kinase-like 2 (CDC2-related kinase) 14.0117
TRIM50 tripartite motif containing 50 14.0039
FKTN fukutin 13.9735
KIAA0586 KIAA0586 13.9571
DHRS9 dehydrogenase/reductase (SDR family) member 9 13.9559
CEP162 centrosomal protein 162kDa 13.936
STX4 syntaxin 4 13.9343
ZC3H13 zinc finger CCCH-type containing 13 13.9334
PIAS1 protein inhibitor of activated STAT, 1 13.8984
ZNF552 zinc finger protein 552 13.8855
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 13.8744
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16 13.8568
CYLC2 cylicin, basic protein of sperm head cytoskeleton 2 13.8568
DRAXIN dorsal inhibitory axon guidance protein 13.8488
NSUN6 NOP2/Sun domain family, member 6 13.8465
ZNF41 zinc finger protein 41 13.8328
TSPY10 testis specific protein, Y-linked 10 13.8189
MARK3 MAP/microtubule affinity-regulating kinase 3 13.8111
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 13.8065
SUV39H2 suppressor of variegation 3-9 homolog 2 (Drosophila) 13.8064
MRPL1 mitochondrial ribosomal protein L1 13.7691
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 13.7404
CEBPZ CCAAT/enhancer binding protein (C/EBP), zeta 13.7359
NDUFAF7 NADH dehydrogenase (ubiquinone) complex I, assembly factor 7 13.7359
GMNN geminin, DNA replication inhibitor 13.7296
OR2A7 olfactory receptor, family 2, subfamily A, member 7 13.7273
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 13.7076
AURKB aurora kinase B 13.7059
POTEB3 POTE ankyrin domain family, member B3 13.6992
ADD3 adducin 3 (gamma) 13.6877
TKFC triokinase/FMN cyclase 13.6816
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 13.6727
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 13.6596
DDX59-AS1 DDX59 antisense RNA 1 13.6551
SCAND3 SCAN domain containing 3 13.6393
LMBRD1 LMBR1 domain containing 1 13.5952
PPIAL4C peptidylprolyl isomerase A (cyclophilin A)-like 4C 13.5426
PPIAL4E peptidylprolyl isomerase A (cyclophilin A)-like 4E 13.5426
PPIAL4A peptidylprolyl isomerase A (cyclophilin A)-like 4A 13.5426