HS578T Gene Set

Dataset DepMap CRISPR Gene Dependency
Category disease or phenotype associations
Type cell line
External Link https://depmap.org/portal/cell_line/ACH-000148
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Genes

229 gene knockdowns changing fitness of HS578T relative to other cell lines from the DepMap CRISPR Gene Dependency Dataset.

Symbol Name Standardized Value
FAM3D family with sequence similarity 3, member D 5.40833
SLC11A1 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1 5.19986
KRTAP6-1 keratin associated protein 6-1 4.96239
NPR1 natriuretic peptide receptor 1 4.71315
HRAS Harvey rat sarcoma viral oncogene homolog 4.51423
FOXC2 forkhead box C2 4.31469
P2RY1 purinergic receptor P2Y, G-protein coupled, 1 4.22685
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 4.16811
DDR2 discoidin domain receptor tyrosine kinase 2 4.04639
SLC25A45 solute carrier family 25, member 45 3.98057
PRDM8 PR domain containing 8 3.96579
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 3.94107
HSPB7 heat shock 27kDa protein family, member 7 (cardiovascular) 3.88207
TRERF1 transcriptional regulating factor 1 3.85688
PDGFRB platelet-derived growth factor receptor, beta polypeptide 3.84862
LRP1 low density lipoprotein receptor-related protein 1 3.79087
CES3 carboxylesterase 3 3.77003
TNNI1 troponin I type 1 (skeletal, slow) 3.74327
PF4V1 platelet factor 4 variant 1 3.73599
CANX calnexin 3.6812
OR1M1 olfactory receptor, family 1, subfamily M, member 1 3.5861
XAF1 XIAP associated factor 1 3.5856
FOXP1 forkhead box P1 3.57547
GJA1 gap junction protein, alpha 1, 43kDa 3.51389
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like 3.46386
DCLK2 doublecortin-like kinase 2 3.45445
DCAF8L1 DDB1 and CUL4 associated factor 8-like 1 3.41849
TMEM47 transmembrane protein 47 3.41415
DNAAF2 dynein, axonemal, assembly factor 2 3.41045
UBALD1 UBA-like domain containing 1 3.37951
EDN1 endothelin 1 3.32219
IGFL2 IGF-like family member 2 3.30514
SLC25A48 solute carrier family 25, member 48 3.25169
KYAT1 kynurenine aminotransferase 1 3.24689
LCE6A late cornified envelope 6A 3.24449
C2ORF70 chromosome 2 open reading frame 70 3.23789
ZNF599 zinc finger protein 599 3.23727
NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 3.23714
KIAA1549L KIAA1549-like 3.23499
DEFB114 defensin, beta 114 3.21455
KLF11 Kruppel-like factor 11 3.21451
OR6C70 olfactory receptor, family 6, subfamily C, member 70 3.20263
FAM186B family with sequence similarity 186, member B 3.19657
ANKRD24 ankyrin repeat domain 24 3.17853
ASAP3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 3.17748
PPTC7 PTC7 protein phosphatase homolog (S. cerevisiae) 3.17699
PCDHA1 protocadherin alpha 1 3.1688
PARK2 parkin RBR E3 ubiquitin protein ligase 3.14256
ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 3.1344
SWI5 SWI5 recombination repair homolog (yeast) 3.13029
FKTN fukutin 3.08936
OR7E24 olfactory receptor, family 7, subfamily E, member 24 3.05728
TSPEAR thrombospondin-type laminin G domain and EAR repeats 3.05071
KCTD14 potassium channel tetramerization domain containing 14 3.02433
SLC26A11 solute carrier family 26 (anion exchanger), member 11 2.99242
CTHRC1 collagen triple helix repeat containing 1 2.972
CIB4 calcium and integrin binding family member 4 2.94129
PHYHD1 phytanoyl-CoA dioxygenase domain containing 1 2.92013
APLNR apelin receptor 2.91622
OR51I2 olfactory receptor, family 51, subfamily I, member 2 2.90459
ITGA8 integrin, alpha 8 2.89526
GMEB2 glucocorticoid modulatory element binding protein 2 2.89456
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 2.87568
TMBIM1 transmembrane BAX inhibitor motif containing 1 2.87433
TEP1 telomerase-associated protein 1 2.86466
LIN28A lin-28 homolog A (C. elegans) 2.83241
BOD1L2 biorientation of chromosomes in cell division 1-like 2 2.83165
SEPT12 septin 12 2.83011
PTRH1 peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) 2.82814
USHBP1 Usher syndrome 1C binding protein 1 2.82646
APOOL apolipoprotein O-like 2.81821
ARHGEF19 Rho guanine nucleotide exchange factor (GEF) 19 2.81767
KLK7 kallikrein-related peptidase 7 2.80286
FOSB FBJ murine osteosarcoma viral oncogene homolog B 2.79772
OR8K1 olfactory receptor, family 8, subfamily K, member 1 2.79207
LAT2 linker for activation of T cells family, member 2 2.78924
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble 2.78596
TVP23A trans-golgi network vesicle protein 23 homolog A (S. cerevisiae) 2.78485
KDM5B lysine (K)-specific demethylase 5B 2.7823
SLC26A7 solute carrier family 26 (anion exchanger), member 7 2.77691
NBL1 neuroblastoma 1, DAN family BMP antagonist 2.77245
CRYGC crystallin, gamma C 2.76019
NELL2 NEL-like 2 (chicken) 2.75618
NABP2 nucleic acid binding protein 2 2.70969
PLAA phospholipase A2-activating protein 2.70691
BAMBI BMP and activin membrane-bound inhibitor 2.67525
DEFB1 defensin, beta 1 2.66871
ORC2 origin recognition complex, subunit 2 2.66466
MYL9 myosin, light chain 9, regulatory 2.65976
IHH indian hedgehog 2.64607
PDIA3 protein disulfide isomerase family A, member 3 2.61676
IGSF21 immunoglobin superfamily, member 21 2.60013
MARCKSL1 MARCKS-like 1 2.58713
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 2.58224
SLC51B solute carrier family 51, beta subunit 2.57332
TJP3 tight junction protein 3 2.57308
NAT2 N-acetyltransferase 2 (arylamine N-acetyltransferase) 2.56829
SLC45A2 solute carrier family 45, member 2 2.56051
CENPU centromere protein U 2.55052
LDLR low density lipoprotein receptor 2.5342
NEFM neurofilament, medium polypeptide 2.52163
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7 2.5178
WASHC2C WASH complex subunit 2C 2.51577
MYO9A myosin IXA 2.51246
ZBTB39 zinc finger and BTB domain containing 39 2.50032
PROB1 proline-rich basic protein 1 2.49885
RXFP3 relaxin/insulin-like family peptide receptor 3 2.49687
SEC24D SEC24 family member D 2.48423
CALML4 calmodulin-like 4 2.47597
ZBED3 zinc finger, BED-type containing 3 2.45
OR4M1 olfactory receptor, family 4, subfamily M, member 1 2.44624
GSN gelsolin 2.44339
CALCB calcitonin-related polypeptide beta 2.44027
EXOC3L1 exocyst complex component 3-like 1 2.4346
MYO1D myosin ID 2.43081
IL13 interleukin 13 2.42245
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 2.41797
SPINK8 serine peptidase inhibitor, Kazal type 8 (putative) 2.41486
ZNF543 zinc finger protein 543 2.41376
KRTAP4-4 keratin associated protein 4-4 2.41266
OR6V1 olfactory receptor, family 6, subfamily V, member 1 2.41165
GPR161 G protein-coupled receptor 161 2.40702
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 2.40454
TRIP12 thyroid hormone receptor interactor 12 2.39839
HADH hydroxyacyl-CoA dehydrogenase 2.39807
R3HCC1 R3H domain and coiled-coil containing 1 2.38042
PRKACA protein kinase, cAMP-dependent, catalytic, alpha 2.37179
FAM92B family with sequence similarity 92, member B 2.36444
OR5P2 olfactory receptor, family 5, subfamily P, member 2 2.36368
MBNL1 muscleblind-like splicing regulator 1 2.36152
TRAM1L1 translocation associated membrane protein 1-like 1 2.35556
FAM131C family with sequence similarity 131, member C 2.35129
ATMIN ATM interactor 2.34957
PLSCR2 phospholipid scramblase 2 2.34589
PSKH2 protein serine kinase H2 2.34516
HDAC1 histone deacetylase 1 2.34281
LARGE2 LARGE xylosyl- and glucuronyltransferase 2 2.33875
UIMC1 ubiquitin interaction motif containing 1 2.33872
OR14J1 olfactory receptor, family 14, subfamily J, member 1 2.33227
LRRC46 leucine rich repeat containing 46 2.33067
IKBIP IKBKB interacting protein 2.32654
BICDL2 BICD family like cargo adaptor 2 2.32049
TBC1D22A TBC1 domain family, member 22A 2.31344
FBLN2 fibulin 2 2.30673
RASSF4 Ras association (RalGDS/AF-6) domain family member 4 2.30118
NKAPL NFKB activating protein-like 2.30073
NUDT10 nudix (nucleoside diphosphate linked moiety X)-type motif 10 2.30044
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 2.29686
TBC1D28 TBC1 domain family, member 28 2.29631
CAPN3 calpain 3, (p94) 2.29542
TMEM125 transmembrane protein 125 2.29254
PLEKHM3 pleckstrin homology domain containing, family M, member 3 2.29018
BAZ1B bromodomain adjacent to zinc finger domain, 1B 2.28965
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 2.28828
TNN tenascin N 2.27964
C1ORF226 chromosome 1 open reading frame 226 2.27271
FAAP24 FA core complex associated protein 24 2.26423
C4ORF19 chromosome 4 open reading frame 19 2.26349
SYCE2 synaptonemal complex central element protein 2 2.26218
JADE3 jade family PHD finger 3 2.24249
RILPL1 Rab interacting lysosomal protein-like 1 2.22589
MORN5 MORN repeat containing 5 2.22584
SRSF4 serine/arginine-rich splicing factor 4 2.22242
TK2 thymidine kinase 2, mitochondrial 2.21921
SMKR1 small lysine-rich protein 1 2.21709
TAC3 tachykinin 3 2.21522
MORN3 MORN repeat containing 3 2.21336
CHRM2 cholinergic receptor, muscarinic 2 2.20738
NPPC natriuretic peptide C 2.20699
OR56A1 olfactory receptor, family 56, subfamily A, member 1 2.20457
PHACTR2 phosphatase and actin regulator 2 2.20183
HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 2.19003
OR52N1 olfactory receptor, family 52, subfamily N, member 1 2.18971
CAPG capping protein (actin filament), gelsolin-like 2.1886
SNED1 sushi, nidogen and EGF-like domains 1 2.18762
CXCL12 chemokine (C-X-C motif) ligand 12 2.17989
LRRC59 leucine rich repeat containing 59 2.17526
ABLIM3 actin binding LIM protein family, member 3 2.17433
TGM3 transglutaminase 3 2.17237
MYBPHL myosin binding protein H-like 2.17175
PROSER1 proline and serine rich 1 2.16742
NAALADL1 N-acetylated alpha-linked acidic dipeptidase-like 1 2.16257
PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 2.15773
POLE4 polymerase (DNA-directed), epsilon 4, accessory subunit 2.15763
CCL26 chemokine (C-C motif) ligand 26 2.1503
FAM53C family with sequence similarity 53, member C 2.14714
ZBTB40 zinc finger and BTB domain containing 40 2.14466
PTX4 pentraxin 4, long 2.14382
PRLH prolactin releasing hormone 2.14051
SLC25A28 solute carrier family 25 (mitochondrial iron transporter), member 28 2.13958
MTF2 metal response element binding transcription factor 2 2.13766
TLE5 TLE family member 5, transcriptional modulator 2.12706
UBL4B ubiquitin-like 4B 2.12676
AHNAK AHNAK nucleoprotein 2.12472
MTTP microsomal triglyceride transfer protein 2.12112
KCNK16 potassium channel, two pore domain subfamily K, member 16 2.11495
SLC12A3 solute carrier family 12 (sodium/chloride transporter), member 3 2.11426
JAZF1 JAZF zinc finger 1 2.11396
C1ORF216 chromosome 1 open reading frame 216 2.11145
PHF8 PHD finger protein 8 2.10842
BBC3 BCL2 binding component 3 2.10699
KLHDC1 kelch domain containing 1 2.10512
DSCC1 DNA replication and sister chromatid cohesion 1 2.09105
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2.08444
OR2G3 olfactory receptor, family 2, subfamily G, member 3 2.08199
RNF113B ring finger protein 113B 2.06976
OR4X1 olfactory receptor, family 4, subfamily X, member 1 (gene/pseudogene) 2.06412
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1 2.06279
CHRND cholinergic receptor, nicotinic, delta (muscle) 2.0602
EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3 2.05698
CDC42BPG CDC42 binding protein kinase gamma (DMPK-like) 2.05623
SLCO1C1 solute carrier organic anion transporter family, member 1C1 2.04426
FOXL1 forkhead box L1 2.0434
PAQR4 progestin and adipoQ receptor family member IV 2.04336
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein 2.04245
ESYT1 extended synaptotagmin-like protein 1 2.04036
ARHGAP12 Rho GTPase activating protein 12 2.03463
NEUROD4 neuronal differentiation 4 2.02924
COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen) 2.02897
HDLBP high density lipoprotein binding protein 2.02653
USP17L13 ubiquitin specific peptidase 17-like family member 13 2.01937
AKT1 v-akt murine thymoma viral oncogene homolog 1 2.01567
SAMD14 sterile alpha motif domain containing 14 2.01489
CLDN9 claudin 9 2.01015
PGGHG protein-glucosylgalactosylhydroxylysine glucosidase 2.00593
MMP1 matrix metallopeptidase 1 2.00515
RIN2 Ras and Rab interactor 2 2.0028
OR2A12 olfactory receptor, family 2, subfamily A, member 12 2.00227
BSN bassoon presynaptic cytomatrix protein 2.00068