Harringtonine_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Harringtonine perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Harringtonine_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.112082
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0575547
KLF10 Kruppel-like factor 10 0.0450874
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0447639
CADM1 cell adhesion molecule 1 0.0421607
EGR1 early growth response 1 0.0391696
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0374271
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0345591
CYLD cylindromatosis (turban tumor syndrome) 0.0320277
CXCL8 chemokine (C-X-C motif) ligand 8 0.0283527
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.028051
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.028034
PCLO piccolo presynaptic cytomatrix protein 0.0277198
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.0272826
MED13 mediator complex subunit 13 0.0270241
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0266873
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0248197
DSCAM Down syndrome cell adhesion molecule 0.0246101
KLF6 Kruppel-like factor 6 0.0241886
MSI2 musashi RNA-binding protein 2 0.0239604
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0231099
MED13L mediator complex subunit 13-like 0.0229555
KMT2C lysine (K)-specific methyltransferase 2C 0.0228161
MYH9 myosin, heavy chain 9, non-muscle 0.0221766
ANKRD33B ankyrin repeat domain 33B 0.0220804
ZC3H11A zinc finger CCCH-type containing 11A 0.0220215
PRRC2C proline-rich coiled-coil 2C 0.0214132
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0211458
CXCL3 chemokine (C-X-C motif) ligand 3 0.0207757
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0205858
RSRC2 arginine/serine-rich coiled-coil 2 0.0201348
IRF1 interferon regulatory factor 1 0.0199271
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0198915
XPO1 exportin 1 0.0198035
HIP1 huntingtin interacting protein 1 0.0197761
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0190997
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0188767
OGA O-GlcNAcase 0.018763
EPS8 epidermal growth factor receptor pathway substrate 8 0.0184933
KMT2E lysine (K)-specific methyltransferase 2E 0.0184658
ALCAM activated leukocyte cell adhesion molecule 0.0183197
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0181852
ENAH enabled homolog (Drosophila) 0.0181236
H1-0 H1.0 linker histone 0.018097
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0180512
PICALM phosphatidylinositol binding clathrin assembly protein 0.0178051
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0177133
LPIN1 lipin 1 0.017517
PLCB4 phospholipase C, beta 4 0.0174982
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0171828
IL6ST interleukin 6 signal transducer 0.016922
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0167677
ZFP36 ZFP36 ring finger protein 0.0165979
WAC WW domain containing adaptor with coiled-coil 0.0165602
ERBIN erbb2 interacting protein 0.0165402
RYBP RING1 and YY1 binding protein 0.0164677
BRD4 bromodomain containing 4 0.0162707
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0162452
ICAM1 intercellular adhesion molecule 1 0.016186
NALF1 NALCN channel auxiliary factor 1 0.0160637
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0159715
TRIM37 tripartite motif containing 37 0.0157267
SERTAD2 SERTA domain containing 2 0.0157204
PER1 period circadian clock 1 0.0156368
H3-3B H3.3 histone B 0.0154265
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0152237
SSBP2 single-stranded DNA binding protein 2 0.0152195
EXT1 exostosin glycosyltransferase 1 0.0149281
TJP2 tight junction protein 2 0.0149027
PDZRN3 PDZ domain containing ring finger 3 0.0146744
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.0146364
QKI QKI, KH domain containing, RNA binding 0.014339
ZFAND3 zinc finger, AN1-type domain 3 0.0142505
KCNT2 potassium channel, sodium activated subfamily T, member 2 0.0142237
NR1D1 nuclear receptor subfamily 1, group D, member 1 0.014209
SMAD3 SMAD family member 3 0.0142079
GPBP1 GC-rich promoter binding protein 1 0.0142001
FSTL3 follistatin-like 3 (secreted glycoprotein) 0.014147
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0141065
SQSTM1 sequestosome 1 0.0138911
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 0.0138747
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0138727
YY1AP1 YY1 associated protein 1 0.0138592
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0137894
SLC12A7 solute carrier family 12 (potassium/chloride transporter), member 7 0.0136437
LMNA lamin A/C 0.0136021
SETD2 SET domain containing 2 0.0135849
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.013572
TRAF3 TNF receptor-associated factor 3 0.0135051
ITGAV integrin, alpha V 0.0134518
ITSN2 intersectin 2 0.0131493
KAT6A K(lysine) acetyltransferase 6A 0.0131086
TXNIP thioredoxin interacting protein 0.0130783
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0130729
TNRC6A trinucleotide repeat containing 6A 0.0130098
ZFP36L1 ZFP36 ring finger protein-like 1 0.0129967
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0129634
PRTG protogenin 0.0128177
ZMIZ1 zinc finger, MIZ-type containing 1 0.0127757
POTEF POTE ankyrin domain family, member F 0.0126928

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0579244
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0542809
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0426032
AKAP12 A kinase (PRKA) anchor protein 12 -0.0348135
LIMCH1 LIM and calponin homology domains 1 -0.0336512
NRG1 neuregulin 1 -0.0309577
FAM13A family with sequence similarity 13, member A -0.0279896
NDRG1 N-myc downstream regulated 1 -0.0276181
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0271368
MEIS2 Meis homeobox 2 -0.0270148
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0269924
SOS1 son of sevenless homolog 1 (Drosophila) -0.0269897
TENT5A terminal nucleotidyltransferase 5A -0.0269067
FMN1 formin 1 -0.0249078
RNF213 ring finger protein 213 -0.0248509
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0223361
PLAT plasminogen activator, tissue -0.0220603
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0213443
NCAM2 neural cell adhesion molecule 2 -0.0202435
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0192207
P4HB prolyl 4-hydroxylase, beta polypeptide -0.019161
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0191
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0182456
GPC5 glypican 5 -0.0178683
MBD5 methyl-CpG binding domain protein 5 -0.0178678
ITPRID2 ITPR interacting domain containing 2 -0.0168462
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0167209
STC1 stanniocalcin 1 -0.0163844
COL3A1 collagen, type III, alpha 1 -0.0162834
FNBP1 formin binding protein 1 -0.0161995
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.015436
PSD3 pleckstrin and Sec7 domain containing 3 -0.0153329
CD36 CD36 molecule (thrombospondin receptor) -0.0152691
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0152478
ESYT2 extended synaptotagmin-like protein 2 -0.0151851
GARS1 glycyl-tRNA synthetase 1 -0.0151243
IARS1 isoleucyl-tRNA synthetase 1 -0.0150753
PCDH9 protocadherin 9 -0.0149278
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0147403
DLC1 DLC1 Rho GTPase activating protein -0.0144192
LSAMP limbic system-associated membrane protein -0.0143745
KDM3A lysine (K)-specific demethylase 3A -0.0143582
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0141724
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0141588
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.014064
PHF3 PHD finger protein 3 -0.0137862
TTC3 tetratricopeptide repeat domain 3 -0.0135146
MAP1B microtubule-associated protein 1B -0.0133618
SMYD3 SET and MYND domain containing 3 -0.013328
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0130124
GDF15 growth differentiation factor 15 -0.0128456
PTPRD protein tyrosine phosphatase, receptor type, D -0.0128
EIF1 eukaryotic translation initiation factor 1 -0.0126549
SYT1 synaptotagmin I -0.0121318
WDR45B WD repeat domain 45B -0.011846
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0117622
RUNX1 runt-related transcription factor 1 -0.0116697
FLNB filamin B, beta -0.0116639
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0116175
TOB1 transducer of ERBB2, 1 -0.0114858
PDIA3 protein disulfide isomerase family A, member 3 -0.0112928
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0112841
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.011252
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0112122
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.011187
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0111425
LDHA lactate dehydrogenase A -0.0111006
CD46 CD46 molecule, complement regulatory protein -0.0110522
CADM2 cell adhesion molecule 2 -0.0110361
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0109811
KPNB1 karyopherin (importin) beta 1 -0.0109442
PGK1 phosphoglycerate kinase 1 -0.01085
COPA coatomer protein complex, subunit alpha -0.0106979
DYM dymeclin -0.010553
NAMPT nicotinamide phosphoribosyltransferase -0.0105431
ATRNL1 attractin-like 1 -0.0104934
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0104261
ENO1 enolase 1, (alpha) -0.0104131
CSDE1 cold shock domain containing E1, RNA-binding -0.0103835
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0103708
ADGRG6 adhesion G protein-coupled receptor G6 -0.0103452
MXI1 MAX interactor 1, dimerization protein -0.0103256
CALU calumenin -0.0102686
LMAN1 lectin, mannose-binding, 1 -0.0101499
LOC112694756 uncharaterized LOC112694756 -0.0100206
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.00987758
DPH6 diphthamine biosynthesis 6 -0.00987631
KIAA1958 KIAA1958 -0.00985277
PTMA prothymosin, alpha -0.00960709
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.00951579
DIAPH2 diaphanous-related formin 2 -0.00943091
SEC31A SEC31 homolog A (S. cerevisiae) -0.00931287
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.00930285
NREP neuronal regeneration related protein -0.00918793
TIMP2 TIMP metallopeptidase inhibitor 2 -0.00910781
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.00906001
CCDC47 coiled-coil domain containing 47 -0.00904876
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.00903668
RNMT RNA (guanine-7-) methyltransferase -0.00901482
TRIM25 tripartite motif containing 25 -0.0090101