Harringtonine_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Harringtonine perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Harringtonine_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SQSTM1 sequestosome 1 0.156597
EGR1 early growth response 1 0.102687
JUN jun proto-oncogene 0.0961291
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0737433
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0684478
KLF10 Kruppel-like factor 10 0.0674839
SETX senataxin 0.0520725
BCLAF1 BCL2-associated transcription factor 1 0.0511182
ZNF292 zinc finger protein 292 0.0431458
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0405095
ANKRD10 ankyrin repeat domain 10 0.0399975
FAT1 FAT atypical cadherin 1 0.0370848
SPAG9 sperm associated antigen 9 0.034783
FNIP2 folliculin interacting protein 2 0.0331088
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.032842
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0324765
NR1D1 nuclear receptor subfamily 1, group D, member 1 0.0316729
FNIP1 folliculin interacting protein 1 0.0316647
H1-0 H1.0 linker histone 0.030239
DSCAM Down syndrome cell adhesion molecule 0.0282245
SFPQ splicing factor proline/glutamine-rich 0.0275486
FAF1 Fas (TNFRSF6) associated factor 1 0.0272217
RAB7A RAB7A, member RAS oncogene family 0.0255025
PER1 period circadian clock 1 0.0248502
CXCL8 chemokine (C-X-C motif) ligand 8 0.0247668
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast) 0.0246721
H3-3B H3.3 histone B 0.0241056
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0236761
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0234668
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.023068
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0229948
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0228491
HDAC9 histone deacetylase 9 0.0227918
RSRC2 arginine/serine-rich coiled-coil 2 0.0227173
KLF6 Kruppel-like factor 6 0.0219359
TOP1 topoisomerase (DNA) I 0.0216997
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0216548
DUSP10 dual specificity phosphatase 10 0.0215876
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.0209385
BRD2 bromodomain containing 2 0.0208802
INTS6 integrator complex subunit 6 0.0206793
CRYM crystallin, mu 0.0200153
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0199242
LMO7 LIM domain 7 0.0196899
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0184252
BIRC3 baculoviral IAP repeat containing 3 0.0182121
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0181129
DST dystonin 0.0180415
IRS2 insulin receptor substrate 2 0.0175074
RESF1 retroelement silencing factor 1 0.0174335
GLS2 glutaminase 2 (liver, mitochondrial) 0.0173351
CAMTA1 calmodulin binding transcription activator 1 0.0167934
CAMK2D calcium/calmodulin-dependent protein kinase II delta 0.0164463
MCTP1 multiple C2 domains, transmembrane 1 0.0162827
TRA2B transformer 2 beta homolog (Drosophila) 0.0161619
SNX9 sorting nexin 9 0.0161009
SMAD3 SMAD family member 3 0.0160945
SLC25A25 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 0.0152932
KDM6B lysine (K)-specific demethylase 6B 0.0152368
SPNS2 spinster homolog 2 (Drosophila) 0.0151682
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0150867
ZSWIM6 zinc finger, SWIM-type containing 6 0.0148565
EEF2 eukaryotic translation elongation factor 2 0.0145911
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.014425
ZC3H11A zinc finger CCCH-type containing 11A 0.0143882
IGF2R insulin-like growth factor 2 receptor 0.0143711
TEX14 testis expressed 14 0.0143494
DDIT3 DNA-damage-inducible transcript 3 0.0142456
ARRDC4 arrestin domain containing 4 0.0142237
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0140811
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.013762
SON SON DNA binding protein 0.013653
ZFP36 ZFP36 ring finger protein 0.013619
MAPK6 mitogen-activated protein kinase 6 0.0133726
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0133259
TSC22D1 TSC22 domain family, member 1 0.0132799
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0132021
COL17A1 collagen, type XVII, alpha 1 0.0131374
PER3 period circadian clock 3 0.0130848
SEC23B Sec23 homolog B (S. cerevisiae) 0.0130812
MYH9 myosin, heavy chain 9, non-muscle 0.0130634
TPP2 tripeptidyl peptidase II 0.0130483
AGO2 argonaute RISC catalytic component 2 0.0128919
KDM6A lysine (K)-specific demethylase 6A 0.0128885
AKAP13 A kinase (PRKA) anchor protein 13 0.012837
IER3 immediate early response 3 0.0126618
FOSL2 FOS-like antigen 2 0.0126078
BHLHE41 basic helix-loop-helix family, member e41 0.0125574
SOX9 SRY (sex determining region Y)-box 9 0.0124446
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0124401
DAAM1 dishevelled associated activator of morphogenesis 1 0.0122995
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0122554
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0121538
RNF103-CHMP3 RNF103-CHMP3 readthrough 0.0120912
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2 0.012038
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0120196
SAMD4A sterile alpha motif domain containing 4A 0.0118529
GOLGA4 golgin A4 0.0118339
COMMD10 COMM domain containing 10 0.0116987
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0116782

decreased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin -0.116952
TPT1 tumor protein, translationally-controlled 1 -0.1035
LCN2 lipocalin 2 -0.0941202
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0939727
ZMYND8 zinc finger, MYND-type containing 8 -0.0866981
BTBD9 BTB (POZ) domain containing 9 -0.0824533
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0649899
HLA-B major histocompatibility complex, class I, B -0.0624331
EPSTI1 epithelial stromal interaction 1 (breast) -0.0538138
PTMA prothymosin, alpha -0.0496534
FTL ferritin, light polypeptide -0.0470686
NDRG1 N-myc downstream regulated 1 -0.0466642
NCKAP5 NCK-associated protein 5 -0.0453864
IFI6 interferon, alpha-inducible protein 6 -0.0448009
MBNL2 muscleblind-like splicing regulator 2 -0.0446611
RPL35A ribosomal protein L35a -0.0423958
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0408832
MT2A metallothionein 2A -0.0393931
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0389041
TMSB10 thymosin beta 10 -0.0378829
RAD51B RAD51 paralog B -0.0374691
C6ORF132 chromosome 6 open reading frame 132 -0.0374444
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0358714
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.035871
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0352688
GCC2 GRIP and coiled-coil domain containing 2 -0.0344929
PATJ PATJ crumbs cell polarity complex component -0.0340769
LPP LIM domain containing preferred translocation partner in lipoma -0.0340621
PGK1 phosphoglycerate kinase 1 -0.0332988
PHF3 PHD finger protein 3 -0.0324944
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0323572
GCLC glutamate-cysteine ligase, catalytic subunit -0.032348
RPLP1 ribosomal protein, large, P1 -0.0319673
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0310124
SAMD12 sterile alpha motif domain containing 12 -0.0305149
PKM pyruvate kinase, muscle -0.0298699
RPS19 ribosomal protein S19 -0.0296528
ZBTB20 zinc finger and BTB domain containing 20 -0.029186
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0288232
ENO1 enolase 1, (alpha) -0.0284487
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0283045
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0275485
RPL34 ribosomal protein L34 -0.0269769
RNF213 ring finger protein 213 -0.0268977
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0267314
SLC38A1 solute carrier family 38, member 1 -0.0263375
RPL12 ribosomal protein L12 -0.0263365
TMPRSS4 transmembrane protease, serine 4 -0.0262412
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0261165
FOXP1 forkhead box P1 -0.0257537
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0253157
RPL11 ribosomal protein L11 -0.0252468
EPCAM epithelial cell adhesion molecule -0.0247567
DHRS3 dehydrogenase/reductase (SDR family) member 3 -0.0245758
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.024548
S100A10 S100 calcium binding protein A10 -0.0242973
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.0241298
IFNGR1 interferon gamma receptor 1 -0.0233676
RPS6 ribosomal protein S6 -0.0231625
RRBP1 ribosome binding protein 1 -0.0229216
RPL19 ribosomal protein L19 -0.0227912
MEIS2 Meis homeobox 2 -0.0227881
TRERF1 transcriptional regulating factor 1 -0.022763
MPHOSPH8 M-phase phosphoprotein 8 -0.0227513
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0224995
MUC13 mucin 13, cell surface associated -0.0224735
MUC20 mucin 20, cell surface associated -0.0222229
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0221551
RPL23 ribosomal protein L23 -0.0221166
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0220862
XAF1 XIAP associated factor 1 -0.0219825
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.021925
RPS8 ribosomal protein S8 -0.0215319
RNF149 ring finger protein 149 -0.0214698
APOL1 apolipoprotein L, 1 -0.0214374
RPS24 ribosomal protein S24 -0.0213355
STS steroid sulfatase (microsomal), isozyme S -0.0211162
NPEPPS aminopeptidase puromycin sensitive -0.0211138
EXT1 exostosin glycosyltransferase 1 -0.0206699
DSTN destrin (actin depolymerizing factor) -0.0206333
HLA-E major histocompatibility complex, class I, E -0.0206155
PRELID2 PRELI domain containing 2 -0.0204041
TSHZ2 teashirt zinc finger homeobox 2 -0.0203231
CALR calreticulin -0.0201962
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0201569
IFI27 interferon, alpha-inducible protein 27 -0.0200336
MT1X metallothionein 1X -0.0200313
PTGR1 prostaglandin reductase 1 -0.0199574
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0198709
ANXA4 annexin A4 -0.0197654
RPL31 ribosomal protein L31 -0.01975
LYZ lysozyme -0.0196805
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0196631
SSH2 slingshot protein phosphatase 2 -0.0196106
RPL37 ribosomal protein L37 -0.0194324
TBC1D22A TBC1 domain family, member 22A -0.0194007
VDAC1 voltage-dependent anion channel 1 -0.0192849
TMC5 transmembrane channel-like 5 -0.0192074
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0190878
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0190498