Harringtonine_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Harringtonine perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Harringtonine_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EGR1 early growth response 1 0.288113
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.219485
CXCL8 chemokine (C-X-C motif) ligand 8 0.207005
GRB10 growth factor receptor-bound protein 10 0.150757
ZFP36 ZFP36 ring finger protein 0.129714
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.106113
KMT2C lysine (K)-specific methyltransferase 2C 0.100724
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0997199
KLF10 Kruppel-like factor 10 0.0967427
JUN jun proto-oncogene 0.0966457
VIM vimentin 0.0962943
VGF VGF nerve growth factor inducible 0.0885072
SQSTM1 sequestosome 1 0.0848178
BIRC3 baculoviral IAP repeat containing 3 0.0842329
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0830225
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0816046
B2M beta-2-microglobulin 0.0743005
TXNIP thioredoxin interacting protein 0.0687051
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0684199
IFIH1 interferon induced with helicase C domain 1 0.0646491
RIGI RNA sensor RIG-I 0.062387
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0610147
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0598384
PTMA prothymosin, alpha 0.0587259
KDM6A lysine (K)-specific demethylase 6A 0.0585832
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0562618
H3-3B H3.3 histone B 0.0554743
FOSL1 FOS-like antigen 1 0.0547807
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0533462
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0531848
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0529209
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.0520182
EEF2 eukaryotic translation elongation factor 2 0.0519398
FN1 fibronectin 1 0.0512196
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0495917
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0483319
IER2 immediate early response 2 0.0455765
RPLP1 ribosomal protein, large, P1 0.0455352
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0430623
KTN1 kinectin 1 (kinesin receptor) 0.0427286
RSAD2 radical S-adenosyl methionine domain containing 2 0.0405054
GADD45B growth arrest and DNA-damage-inducible, beta 0.0397869
FNDC3A fibronectin type III domain containing 3A 0.0387319
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.038565
YBX1 Y box binding protein 1 0.0370246
CENPF centromere protein F, 350/400kDa 0.0370084
HMGB2 high mobility group box 2 0.036284
KRT17 keratin 17, type I 0.0360238
ARRDC4 arrestin domain containing 4 0.0355743
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0355237
PLK2 polo-like kinase 2 0.0354157
SETX senataxin 0.034866
SOD2 superoxide dismutase 2, mitochondrial 0.0343616
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.033981
DENND4A DENN/MADD domain containing 4A 0.0338859
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0335446
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0334446
OGA O-GlcNAcase 0.0331776
SSH2 slingshot protein phosphatase 2 0.0329817
BRD4 bromodomain containing 4 0.0328297
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0324291
SON SON DNA binding protein 0.0316569
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.031571
SFPQ splicing factor proline/glutamine-rich 0.0313162
KDM6B lysine (K)-specific demethylase 6B 0.0311194
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0309625
GPBP1 GC-rich promoter binding protein 1 0.0308016
SPAG9 sperm associated antigen 9 0.0304979
PGK1 phosphoglycerate kinase 1 0.0299579
TNIP1 TNFAIP3 interacting protein 1 0.0299164
TRIP12 thyroid hormone receptor interactor 12 0.0295865
APLP2 amyloid beta (A4) precursor-like protein 2 0.0289652
LAMB3 laminin, beta 3 0.0289416
HLA-A major histocompatibility complex, class I, A 0.0280868
CXCL2 chemokine (C-X-C motif) ligand 2 0.028003
TMSB10 thymosin beta 10 0.027744
NAMPT nicotinamide phosphoribosyltransferase 0.0275016
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0273814
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0271389
IER3 immediate early response 3 0.0270311
RSRC2 arginine/serine-rich coiled-coil 2 0.0269116
BRD2 bromodomain containing 2 0.026818
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0266932
ISG20 interferon stimulated exonuclease gene 20kDa 0.0265851
SRPK2 SRSF protein kinase 2 0.0263973
RPLP2 ribosomal protein, large, P2 0.0256672
CALR calreticulin 0.0256438
TSC22D1 TSC22 domain family, member 1 0.0255579
SRSF3 serine/arginine-rich splicing factor 3 0.0255548
STAG2 stromal antigen 2 0.0254316
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0253138
RBM25 RNA binding motif protein 25 0.0249931
TMEM87A transmembrane protein 87A 0.0247784
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0247048
ARHGAP26 Rho GTPase activating protein 26 0.0246689
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.0245157
RNASEH2A ribonuclease H2, subunit A 0.0240808
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0239857
GPR137B G protein-coupled receptor 137B 0.0236058
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0235222

decreased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific -0.0701843
MYO1E myosin IE -0.061623
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0592864
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0554381
KMT2E lysine (K)-specific methyltransferase 2E -0.0545775
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0532754
AKAP12 A kinase (PRKA) anchor protein 12 -0.0527552
MBD5 methyl-CpG binding domain protein 5 -0.0514063
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0486304
TRIO trio Rho guanine nucleotide exchange factor -0.0463137
LMO7 LIM domain 7 -0.0446605
MSI2 musashi RNA-binding protein 2 -0.04352
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0434231
MAML2 mastermind-like 2 (Drosophila) -0.0428607
CSNK1A1 casein kinase 1, alpha 1 -0.0425287
NF1 neurofibromin 1 -0.0409943
FNIP1 folliculin interacting protein 1 -0.0403706
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0401518
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.039809
CERS6 ceramide synthase 6 -0.039726
BIRC6 baculoviral IAP repeat containing 6 -0.0388529
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0385607
SERBP1 SERPINE1 mRNA binding protein 1 -0.0384355
USP53 ubiquitin specific peptidase 53 -0.0381033
SETD2 SET domain containing 2 -0.0379139
ANXA2 annexin A2 -0.037578
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0369778
PTK2 protein tyrosine kinase 2 -0.0367778
GPC6 glypican 6 -0.036553
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0361022
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0360271
ZMYND8 zinc finger, MYND-type containing 8 -0.0357717
ZBTB20 zinc finger and BTB domain containing 20 -0.0352479
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0345461
MBNL1 muscleblind-like splicing regulator 1 -0.0345219
PAPOLA poly(A) polymerase alpha -0.0344418
NCOA3 nuclear receptor coactivator 3 -0.0341606
YBX3 Y box binding protein 3 -0.0339563
RUNX1 runt-related transcription factor 1 -0.0333988
EIF3E eukaryotic translation initiation factor 3, subunit E -0.032755
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.032736
RORA RAR-related orphan receptor A -0.0324012
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0321424
CTTN cortactin -0.0318763
RPS14 ribosomal protein S14 -0.0318642
KDM2A lysine (K)-specific demethylase 2A -0.0318586
SLC38A1 solute carrier family 38, member 1 -0.0317213
XPR1 xenotropic and polytropic retrovirus receptor 1 -0.0317046
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0316205
DGKD diacylglycerol kinase, delta 130kDa -0.031374
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 -0.0311675
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0311582
SMYD3 SET and MYND domain containing 3 -0.0311152
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0309399
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0307604
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.030707
RAD51B RAD51 paralog B -0.030648
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0303288
CYTH1 cytohesin 1 -0.0300098
OSMR oncostatin M receptor -0.0298835
ENAH enabled homolog (Drosophila) -0.0297599
ACTN1 actinin, alpha 1 -0.0295063
GDI2 GDP dissociation inhibitor 2 -0.0293767
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0291676
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0288905
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0288837
SLIT2 slit homolog 2 (Drosophila) -0.0288479
AKAP9 A kinase (PRKA) anchor protein 9 -0.0288239
VMP1 vacuole membrane protein 1 -0.0287835
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0287368
PDIA3 protein disulfide isomerase family A, member 3 -0.0287136
NAP1L4 nucleosome assembly protein 1-like 4 -0.0286477
MBNL2 muscleblind-like splicing regulator 2 -0.0284231
PTGES2 prostaglandin E synthase 2 -0.028308
KMT2A lysine (K)-specific methyltransferase 2A -0.0283062
COG5 component of oligomeric golgi complex 5 -0.0283036
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.028286
NRG1 neuregulin 1 -0.0282353
ITCH itchy E3 ubiquitin protein ligase -0.0280869
TTC3 tetratricopeptide repeat domain 3 -0.0280704
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0280065
FTO fat mass and obesity associated -0.0279407
SLMAP sarcolemma associated protein -0.0279191
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) -0.0279064
COPA coatomer protein complex, subunit alpha -0.0276065
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1 -0.0276022
OXSR1 oxidative stress responsive 1 -0.0275781
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0275163
S100A10 S100 calcium binding protein A10 -0.0273477
DOCK5 dedicator of cytokinesis 5 -0.0272547
MAP1B microtubule-associated protein 1B -0.0272027
GOLGB1 golgin B1 -0.0272014
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 -0.0270521
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0269547
SEC31A SEC31 homolog A (S. cerevisiae) -0.0268893
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0267175
GPATCH2L G patch domain containing 2-like -0.0266801
BPTF bromodomain PHD finger transcription factor -0.026651
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0266171
FAT1 FAT atypical cadherin 1 -0.0260615