Harringtonine_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Harringtonine perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Harringtonine_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.179815
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.107922
SQSTM1 sequestosome 1 0.0964283
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0948849
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0879515
IFIH1 interferon induced with helicase C domain 1 0.0868573
B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 0.0848383
DDIT4 DNA-damage-inducible transcript 4 0.0845993
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0761214
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0755404
PRRC2C proline-rich coiled-coil 2C 0.0720223
CCDC6 coiled-coil domain containing 6 0.0719916
FTL ferritin, light polypeptide 0.0716761
SPAG9 sperm associated antigen 9 0.0689718
RGS2 regulator of G-protein signaling 2 0.0685821
ERO1B endoplasmic reticulum oxidoreductase 1 beta 0.0663034
RPL37A ribosomal protein L37a 0.0647372
B2M beta-2-microglobulin 0.0625252
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0616293
CXCL8 chemokine (C-X-C motif) ligand 8 0.0599746
NALF1 NALCN channel auxiliary factor 1 0.0594335
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0570682
MT2A metallothionein 2A 0.0546233
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.0538659
PGK1 phosphoglycerate kinase 1 0.0525967
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0502627
CHD1 chromodomain helicase DNA binding protein 1 0.0498724
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0489701
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0489466
RIGI RNA sensor RIG-I 0.0483305
OASL 2'-5'-oligoadenylate synthetase-like 0.0475924
PTMA prothymosin, alpha 0.0474419
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0471708
RPS6 ribosomal protein S6 0.0464655
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0461319
LOC102724023 ES1 protein homolog, mitochondrial 0.0456433
CD83 CD83 molecule 0.0455492
RYR2 ryanodine receptor 2 (cardiac) 0.0453353
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0444751
TPT1 tumor protein, translationally-controlled 1 0.0442207
CXCL3 chemokine (C-X-C motif) ligand 3 0.0435335
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0432319
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0428649
PER1 period circadian clock 1 0.0410922
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0407929
UBAP2L ubiquitin associated protein 2-like 0.0397363
RPS19 ribosomal protein S19 0.0396452
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0391894
HEATR1 HEAT repeat containing 1 0.039185
ZFP36 ZFP36 ring finger protein 0.0391321
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0388132
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0387122
KMT2C lysine (K)-specific methyltransferase 2C 0.0387084
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.0384944
RPL36 ribosomal protein L36 0.0380505
EIF5B eukaryotic translation initiation factor 5B 0.0377393
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0373695
NID1 nidogen 1 0.0371842
NR1D1 nuclear receptor subfamily 1, group D, member 1 0.0369645
KLF10 Kruppel-like factor 10 0.0367853
TMSB10 thymosin beta 10 0.0359637
ISG15 ISG15 ubiquitin-like modifier 0.0358266
RPL26 ribosomal protein L26 0.0357921
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.035511
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0355052
P3H2 prolyl 3-hydroxylase 2 0.035502
RPL31 ribosomal protein L31 0.0349801
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0349325
RPLP1 ribosomal protein, large, P1 0.0340844
RPL19 ribosomal protein L19 0.032926
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0317606
RPS3 ribosomal protein S3 0.0315411
SLC12A7 solute carrier family 12 (potassium/chloride transporter), member 7 0.0309158
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0308491
ARL5B ADP-ribosylation factor-like 5B 0.0303975
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0302631
RSRC2 arginine/serine-rich coiled-coil 2 0.029874
NAP1L1 nucleosome assembly protein 1-like 1 0.0297673
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa 0.0296284
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0294438
ZNFX1 zinc finger, NFX1-type containing 1 0.0288402
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0288368
AFF4 AF4/FMR2 family, member 4 0.0287261
KDM6A lysine (K)-specific demethylase 6A 0.0284457
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.028443
EGR4 early growth response 4 0.0283686
SOX4 SRY (sex determining region Y)-box 4 0.0282358
USP36 ubiquitin specific peptidase 36 0.0280464
NFKB2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) 0.0280077
HILPDA hypoxia inducible lipid droplet-associated 0.0279167
PRKN parkin RBR E3 ubiquitin protein ligase 0.0278753
RPL23 ribosomal protein L23 0.0277655
DENND4A DENN/MADD domain containing 4A 0.027566
OGA O-GlcNAcase 0.0275344
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0269903
SAR1A secretion associated, Ras related GTPase 1A 0.0269661
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.026947
GNAS GNAS complex locus 0.0269103
RPL35 ribosomal protein L35 0.0268929
YBX3 Y box binding protein 3 0.0265623

decreased expression

Symbol Name Standardized Value
UBC ubiquitin C -0.119786
EFNA5 ephrin-A5 -0.0935156
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0848669
GDA guanine deaminase -0.0795983
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0611278
LIMCH1 LIM and calponin homology domains 1 -0.0596751
EGR1 early growth response 1 -0.0570688
TRIO trio Rho guanine nucleotide exchange factor -0.0557329
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0527922
INHBA inhibin, beta A -0.0522436
PSD3 pleckstrin and Sec7 domain containing 3 -0.0471225
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0466699
PLCB4 phospholipase C, beta 4 -0.0461175
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0457915
ASPH aspartate beta-hydroxylase -0.0457744
GRAMD1B GRAM domain containing 1B -0.0457277
FLNB filamin B, beta -0.0439899
CD44 CD44 molecule (Indian blood group) -0.0437236
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0432944
RTN4 reticulon 4 -0.0425309
CDH13 cadherin 13 -0.0411441
AUTS2 autism susceptibility candidate 2 -0.0407579
NPAS2 neuronal PAS domain protein 2 -0.0401555
TXNRD1 thioredoxin reductase 1 -0.039575
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0387785
CARD16 caspase recruitment domain family, member 16 -0.0370283
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0365731
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.036556
COL4A6 collagen, type IV, alpha 6 -0.0362351
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0353545
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0325435
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0320659
NBAS neuroblastoma amplified sequence -0.031504
MAML3 mastermind-like 3 (Drosophila) -0.0304841
SAMD4A sterile alpha motif domain containing 4A -0.0303498
DOCK4 dedicator of cytokinesis 4 -0.0295424
ATXN1 ataxin 1 -0.0293794
SOD2 superoxide dismutase 2, mitochondrial -0.029296
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0290208
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0288539
COG5 component of oligomeric golgi complex 5 -0.0285597
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.028523
SMOC1 SPARC related modular calcium binding 1 -0.0283863
CREB5 cAMP responsive element binding protein 5 -0.0282519
FAT1 FAT atypical cadherin 1 -0.0280722
RASAL2 RAS protein activator like 2 -0.0280495
DNER delta/notch-like EGF repeat containing -0.0278132
LDHA lactate dehydrogenase A -0.0277673
SOCS3 suppressor of cytokine signaling 3 -0.0275042
CD109 CD109 molecule -0.0274563
VIM vimentin -0.0271169
RUNX1 runt-related transcription factor 1 -0.0270712
IARS1 isoleucyl-tRNA synthetase 1 -0.0268129
MYO10 myosin X -0.0266802
KYNU kynureninase -0.0264395
FNDC3B fibronectin type III domain containing 3B -0.0264045
EEF2 eukaryotic translation elongation factor 2 -0.025976
JMJD1C jumonji domain containing 1C -0.025902
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0257793
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0257038
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0253313
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0250874
COPA coatomer protein complex, subunit alpha -0.0248669
SLC38A2 solute carrier family 38, member 2 -0.024321
PCBP2 poly(rC) binding protein 2 -0.0241966
NDRG1 N-myc downstream regulated 1 -0.0238788
KDM4C lysine (K)-specific demethylase 4C -0.0227737
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0227178
KDM3A lysine (K)-specific demethylase 3A -0.022667
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0226646
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0223523
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0219185
ELL2 elongation factor, RNA polymerase II, 2 -0.0218568
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0218428
SH3KBP1 SH3-domain kinase binding protein 1 -0.0216708
BMERB1 bMERB domain containing 1 -0.0215208
LAMA5 laminin, alpha 5 -0.0214011
CALU calumenin -0.0210053
SNX9 sorting nexin 9 -0.0209609
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0208517
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0205247
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0205164
AKAP13 A kinase (PRKA) anchor protein 13 -0.0204238
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0203467
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -0.0203333
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0202284
ITPRID2 ITPR interacting domain containing 2 -0.0201195
IER3 immediate early response 3 -0.0200995
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0199493
USP34 ubiquitin specific peptidase 34 -0.0197771
PDIA4 protein disulfide isomerase family A, member 4 -0.0197204
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0194119
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0191714
GPC6 glypican 6 -0.0191395
ARB2A ARB2 cotranscriptional regulator A -0.0191334
BIRC6 baculoviral IAP repeat containing 6 -0.019036
TUT7 terminal uridylyl transferase 7 -0.0189825
VMP1 vacuole membrane protein 1 -0.0188805
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0187832
EXOC4 exocyst complex component 4 -0.0187754