Harringtonine_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Harringtonine perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Harringtonine_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.112328
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.111565
ANKRD33B ankyrin repeat domain 33B 0.0939302
CENPF centromere protein F, 350/400kDa 0.0920118
KLF10 Kruppel-like factor 10 0.0879937
ZNF217 zinc finger protein 217 0.0857227
PCLO piccolo presynaptic cytomatrix protein 0.0850858
SETD5 SET domain containing 5 0.0702982
ANKRD12 ankyrin repeat domain 12 0.0616475
BIRC3 baculoviral IAP repeat containing 3 0.0594745
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0594654
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0571082
H1-0 H1.0 linker histone 0.0564925
KMT2E lysine (K)-specific methyltransferase 2E 0.0549159
PRRC2C proline-rich coiled-coil 2C 0.052927
PLK2 polo-like kinase 2 0.0524105
MKI67 marker of proliferation Ki-67 0.0514915
OGA O-GlcNAcase 0.0504733
BRD2 bromodomain containing 2 0.0491158
SFPQ splicing factor proline/glutamine-rich 0.0461081
MED13L mediator complex subunit 13-like 0.0460123
TMSB10 thymosin beta 10 0.0458598
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0450865
COL3A1 collagen, type III, alpha 1 0.0450847
FNDC3B fibronectin type III domain containing 3B 0.0448379
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.044675
CCDC88A coiled-coil domain containing 88A 0.0444889
COL5A2 collagen, type V, alpha 2 0.0440724
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.043951
SQSTM1 sequestosome 1 0.0437999
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0437746
ECT2 epithelial cell transforming 2 0.0424162
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0420956
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.041895
ARL13B ADP-ribosylation factor-like 13B 0.0418513
EGR1 early growth response 1 0.0417105
PDS5B PDS5 cohesin associated factor B 0.0410991
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0407068
TPR translocated promoter region, nuclear basket protein 0.0404275
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0399021
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0399015
DST dystonin 0.039837
B2M beta-2-microglobulin 0.0398083
SRRM2 serine/arginine repetitive matrix 2 0.0397971
FAM171B family with sequence similarity 171, member B 0.0393189
RYBP RING1 and YY1 binding protein 0.0386739
GPBP1 GC-rich promoter binding protein 1 0.0383358
PHIP pleckstrin homology domain interacting protein 0.0379603
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0362988
ARRDC3 arrestin domain containing 3 0.0362691
EXT1 exostosin glycosyltransferase 1 0.0362506
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0362014
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0360111
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0359536
ITGAV integrin, alpha V 0.0355237
ARHGAP5 Rho GTPase activating protein 5 0.0354775
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0354293
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0353297
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0350778
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.034967
JUN jun proto-oncogene 0.0349586
RANBP2 RAN binding protein 2 0.0348298
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0345642
UVRAG UV radiation resistance associated 0.0338828
IWS1 IWS1 homolog (S. cerevisiae) 0.0338171
BNC2 basonuclin 2 0.0337181
ZFP36 ZFP36 ring finger protein 0.0335883
TPT1 tumor protein, translationally-controlled 1 0.0333155
NIPBL Nipped-B homolog (Drosophila) 0.0331641
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0329462
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0329386
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0327003
IL6ST interleukin 6 signal transducer 0.0325506
HMCN1 hemicentin 1 0.0325008
PTMA prothymosin, alpha 0.0324123
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0317386
THOC2 THO complex 2 0.0316691
GLS2 glutaminase 2 (liver, mitochondrial) 0.0313928
CKAP2 cytoskeleton associated protein 2 0.031124
RSF1 remodeling and spacing factor 1 0.0307754
GOLGB1 golgin B1 0.0302491
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.02994
COL1A2 collagen, type I, alpha 2 0.029716
DENND4A DENN/MADD domain containing 4A 0.0296374
FNDC3A fibronectin type III domain containing 3A 0.029524
TPX2 TPX2, microtubule-associated 0.0289996
RSRC2 arginine/serine-rich coiled-coil 2 0.0289617
KIF4A kinesin family member 4A 0.028432
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0281531
SCAF11 SR-related CTD-associated factor 11 0.0280892
PHACTR4 phosphatase and actin regulator 4 0.0280514
SYT1 synaptotagmin I 0.0278776
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0272246
ATF7IP activating transcription factor 7 interacting protein 0.0271081
HYCC2 hyccin PI4KA lipid kinase complex subunit 2 0.0271032
NUP153 nucleoporin 153kDa 0.0270127
FIGN fidgetin 0.0269444
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0269081
RPL31 ribosomal protein L31 0.0267979
SETD2 SET domain containing 2 0.0267271

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.108723
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.101791
ZNF292 zinc finger protein 292 -0.0970184
THBS1 thrombospondin 1 -0.0814617
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0751972
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.065544
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0610222
GPC3 glypican 3 -0.0544942
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0541648
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0524716
ZFAND3 zinc finger, AN1-type domain 3 -0.0437741
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0436328
SMYD3 SET and MYND domain containing 3 -0.0435705
KDM3A lysine (K)-specific demethylase 3A -0.043464
NPAS3 neuronal PAS domain protein 3 -0.0427906
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0397029
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.038557
ANK2 ankyrin 2, neuronal -0.037841
BHLHE40 basic helix-loop-helix family, member e40 -0.0370837
MAP4 microtubule-associated protein 4 -0.033747
AHNAK AHNAK nucleoprotein -0.0333182
ZFPM2 zinc finger protein, FOG family member 2 -0.0327422
RLF rearranged L-myc fusion -0.0325403
TNRC6B trinucleotide repeat containing 6B -0.0320929
NAP1L1 nucleosome assembly protein 1-like 1 -0.0317614
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0316888
FOXP2 forkhead box P2 -0.031421
ACTG1 actin gamma 1 -0.0310553
IGF1R insulin-like growth factor 1 receptor -0.0308781
CAMTA1 calmodulin binding transcription activator 1 -0.0303704
HMGA2 high mobility group AT-hook 2 -0.0301976
URI1 URI1, prefoldin-like chaperone -0.0296838
SAMD4A sterile alpha motif domain containing 4A -0.0293584
PDIA3 protein disulfide isomerase family A, member 3 -0.0292813
IARS1 isoleucyl-tRNA synthetase 1 -0.0288686
PTK2 protein tyrosine kinase 2 -0.0286725
PGAP1 post-GPI attachment to proteins 1 -0.0281985
TENM3 teneurin transmembrane protein 3 -0.0281755
TPM3 tropomyosin 3 -0.0280657
SPIDR scaffolding protein involved in DNA repair -0.0279021
ANXA2 annexin A2 -0.0274393
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 -0.026923
CTBP2 C-terminal binding protein 2 -0.0267062
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0265894
PDS5A PDS5 cohesin associated factor A -0.0260638
SLIT2 slit homolog 2 (Drosophila) -0.025438
WDR43 WD repeat domain 43 -0.0253713
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0251467
CLTC clathrin, heavy chain (Hc) -0.0251366
LDHA lactate dehydrogenase A -0.0246858
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0238814
MEIS2 Meis homeobox 2 -0.0237004
FLNB filamin B, beta -0.0236802
BZW1 basic leucine zipper and W2 domains 1 -0.0230036
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0229544
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.0228291
RAB7A RAB7A, member RAS oncogene family -0.0228122
TENM2 teneurin transmembrane protein 2 -0.0227568
UBE3C ubiquitin protein ligase E3C -0.022556
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0224756
AHCTF1 AT hook containing transcription factor 1 -0.0223197
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0219833
CCN2 cellular communication network factor 2 -0.0219297
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0218576
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 -0.0217239
ILRUN inflammation and lipid regulator with UBA-like and NBR1-like domains -0.0215214
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0214515
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0211224
ANKRD11 ankyrin repeat domain 11 -0.0210743
GRB2 growth factor receptor-bound protein 2 -0.0209623
MRPS30 mitochondrial ribosomal protein S30 -0.0209079
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0208446
PBX3 pre-B-cell leukemia homeobox 3 -0.0208194
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0207987
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0206726
IPO7 importin 7 -0.0206217
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0204735
PARD3 par-3 family cell polarity regulator -0.0204598
SRPK2 SRSF protein kinase 2 -0.0204171
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0203805
VMP1 vacuole membrane protein 1 -0.0203558
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0203535
KDM2A lysine (K)-specific demethylase 2A -0.02028
KIAA1328 KIAA1328 -0.0200125
DSTN destrin (actin depolymerizing factor) -0.0199324
HMGB1 high mobility group box 1 -0.0199166
CALM3 calmodulin 3 (phosphorylase kinase, delta) -0.0197399
SOS1 son of sevenless homolog 1 (Drosophila) -0.0197224
BLTP2 bridge-like lipid transfer protein family member 2 -0.0195994
SRP54 signal recognition particle 54kDa -0.0195879
TXNRD1 thioredoxin reductase 1 -0.0194761
SLC38A1 solute carrier family 38, member 1 -0.0192789
CDC73 cell division cycle 73 -0.0187793
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0187613
RHOA ras homolog family member A -0.0187339
RBBP7 retinoblastoma binding protein 7 -0.0185606
SET SET nuclear proto-oncogene -0.0185538
AGTPBP1 ATP/GTP binding protein 1 -0.01854
RREB1 ras responsive element binding protein 1 -0.0184881
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0184753