Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-6220-01A-11R-1915-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
Similar Terms
Downloads & Tools


256 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-6220-01A-11R-1915-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AAR2 AAR2 splicing factor homolog (S. cerevisiae)
AATK apoptosis-associated tyrosine kinase
ABCA10 ATP-binding cassette, sub-family A (ABC1), member 10
ABCA12 ATP-binding cassette, sub-family A (ABC1), member 12
ACACA acetyl-CoA carboxylase alpha
ACSS2 acyl-CoA synthetase short-chain family member 2
AJAP1 adherens junctions associated protein 1
AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
ANGPT4 angiopoietin 4
ANKEF1 ankyrin repeat and EF-hand domain containing 1
ANKFN1 ankyrin-repeat and fibronectin type III domain containing 1
ANKRD22 ankyrin repeat domain 22
AP1B1 adaptor-related protein complex 1, beta 1 subunit
ARF3 ADP-ribosylation factor 3
ATMIN ATM interactor
ATP11B ATPase, class VI, type 11B
ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1
BCL2L1 BCL2-like 1
BDKRB2 bradykinin receptor B2
BECN1 beclin 1, autophagy related
BLCAP bladder cancer associated protein
BTRC beta-transducin repeat containing E3 ubiquitin protein ligase
C12ORF43 chromosome 12 open reading frame 43
C16ORF62 chromosome 16 open reading frame 62
C16ORF70 chromosome 16 open reading frame 70
C17ORF98 chromosome 17 open reading frame 98
C20ORF24 chromosome 20 open reading frame 24
CACUL1 CDK2-associated, cullin domain 1
CALCOCO2 calcium binding and coiled-coil domain 2
CARD18 caspase recruitment domain family, member 18
CARHSP1 calcium regulated heat stable protein 1, 24kDa
CCBE1 collagen and calcium binding EGF domains 1
CCDC43 coiled-coil domain containing 43
CCDC85C coiled-coil domain containing 85C
CCNC cyclin C
CCNK cyclin K
CCNYL1 cyclin Y-like 1
CDK5RAP1 CDK5 regulatory subunit associated protein 1
CEACAM18 carcinoembryonic antigen-related cell adhesion molecule 18
CETN1 centrin, EF-hand protein, 1
CHMP4B charged multivesicular body protein 4B
CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2
CHTF8 CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit
CNBP CCHC-type zinc finger, nucleic acid binding protein
COASY CoA synthase
CPNE1 copine I
CSNK1A1 casein kinase 1, alpha 1
CSNK1A1L casein kinase 1, alpha 1-like
CSNK2A1 casein kinase 2, alpha 1 polypeptide
CSTF2 cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa
CTNNBL1 catenin, beta like 1
CXORF66 chromosome X open reading frame 66
CYP4F22 cytochrome P450, family 4, subfamily F, polypeptide 22
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
DHCR24 24-dehydrocholesterol reductase
DHRS1 dehydrogenase/reductase (SDR family) member 1
DISP2 dispatched homolog 2 (Drosophila)
DLGAP4 discs, large (Drosophila) homolog-associated protein 4
DMRTC1 DMRT-like family C1
DOLK dolichol kinase
DSN1 DSN1, MIS12 kinetochore complex component
EDEM2 ER degradation enhancer, mannosidase alpha-like 2
EHBP1L1 EH domain binding protein 1-like 1
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
EIF6 eukaryotic translation initiation factor 6
ELOVL1 ELOVL fatty acid elongase 1
ELOVL7 ELOVL fatty acid elongase 7
EPB41L1 erythrocyte membrane protein band 4.1-like 1
ERGIC3 ERGIC and golgi 3
ESRP2 epithelial splicing regulatory protein 2
ESYT3 extended synaptotagmin-like protein 3
EXTL3 exostosin-like glycosyltransferase 3
EZR ezrin
FAM104A family with sequence similarity 104, member A
FAM136BP family with sequence similarity 136, member B, pseudogene
FAM83C family with sequence similarity 83, member C
FAM83F family with sequence similarity 83, member F
FBXO45 F-box protein 45
FEZ1 fasciculation and elongation protein zeta 1 (zygin I)
FYTTD1 forty-two-three domain containing 1
GLTP glycolipid transfer protein
GM2A GM2 ganglioside activator
GSDMA gasdermin A
GSS glutathione synthetase
HDX highly divergent homeobox
HEPHL1 hephaestin-like 1
HHLA3 HERV-H LTR-associating 3
HIST1H2BC histone cluster 1, H2bc
HIST1H3E histone cluster 1, H3e
HLA-DOA major histocompatibility complex, class II, DO alpha
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-DRB6 major histocompatibility complex, class II, DR beta 6 (pseudogene)
HM13 histocompatibility (minor) 13
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
HMOX2 heme oxygenase 2
IL22RA1 interleukin 22 receptor, alpha 1
ISY1 ISY1 splicing factor homolog (S. cerevisiae)
ITCH itchy E3 ubiquitin protein ligase
JMJD7-PLA2G4B JMJD7-PLA2G4B readthrough
JUP junction plakoglobin
KALRN kalirin, RhoGEF kinase
KCNK10 potassium channel, two pore domain subfamily K, member 10
KIAA0226 KIAA0226
KIAA1919 KIAA1919
KIF3B kinesin family member 3B
KIZ kizuna centrosomal protein
KLK10 kallikrein-related peptidase 10
KLK7 kallikrein-related peptidase 7
KLK9 kallikrein-related peptidase 9
KPNA5 karyopherin alpha 5 (importin alpha 6)
KRT10 keratin 10, type I
KRT6A keratin 6A, type II
KRT6B keratin 6B, type II
KRT6C keratin 6C, type II
LINC01555 long intergenic non-protein coding RNA 1555
LIPM lipase, family member M
LOC152225 uncharacterized LOC152225
LPAR3 lysophosphatidic acid receptor 3
LRP11 low density lipoprotein receptor-related protein 11
LTB4R leukotriene B4 receptor
LTB4R2 leukotriene B4 receptor 2
MACF1 microtubule-actin crosslinking factor 1
MACROD2 MACRO domain containing 2
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
MAGEA3 melanoma antigen family A3
MAGEA4 melanoma antigen family A4
MANBAL mannosidase, beta A, lysosomal-like
MAPK13 mitogen-activated protein kinase 13
MAPRE1 microtubule-associated protein, RP/EB family, member 1
MARK3 MAP/microtubule affinity-regulating kinase 3
MCTP1 multiple C2 domains, transmembrane 1
MED24 mediator complex subunit 24
MED6 mediator complex subunit 6
MED8 mediator complex subunit 8
MEFV Mediterranean fever
METTL22 methyltransferase like 22
METTL9 methyltransferase like 9
MFN1 mitofusin 1
MFN2 mitofusin 2
MGC57346 ADP-ribosylation factor pseudogene
MON1B MON1 secretory trafficking family member B
MPZL3 myelin protein zero-like 3
MREG melanoregulin
MTO1 mitochondrial tRNA translation optimization 1
MTRF1L mitochondrial translational release factor 1-like
NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit
NAV3 neuron navigator 3
NCOA6 nuclear receptor coactivator 6
NDRG3 NDRG family member 3
NELL2 NEL-like 2 (chicken)
NEU2 sialidase 2 (cytosolic sialidase)
NFS1 NFS1 cysteine desulfurase
NIN ninein (GSK3B interacting protein)
NOP9 NOP9 nucleolar protein
NPY4R neuropeptide Y receptor Y4
NSFL1C NSFL1 (p97) cofactor (p47)
NUMB numb homolog (Drosophila)
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
OR10S1 olfactory receptor, family 10, subfamily S, member 1
OR2M7 olfactory receptor, family 2, subfamily M, member 7
OR52K2 olfactory receptor, family 52, subfamily K, member 2
OR5AP2 olfactory receptor, family 5, subfamily AP, member 2
OR8B3 olfactory receptor, family 8, subfamily B, member 3
OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2
PAQR5 progestin and adipoQ receptor family member V
PCYT1A phosphate cytidylyltransferase 1, choline, alpha
PHF20 PHD finger protein 20
PI3 peptidase inhibitor 3, skin-derived
PIGU phosphatidylinositol glycan anchor biosynthesis, class U
PLA2G4E phospholipase A2, group IVE
PLCXD1 phosphatidylinositol-specific phospholipase C, X domain containing 1
PLEKHM1 pleckstrin homology domain containing, family M (with RUN domain) member 1
POFUT1 protein O-fucosyltransferase 1
POLR3F polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa
PPARD peroxisome proliferator-activated receptor delta
PPT2 palmitoyl-protein thioesterase 2
PROCR protein C receptor, endothelial
PRSS22 protease, serine, 22
PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
PSME3 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)
PSMF1 proteasome (prosome, macropain) inhibitor subunit 1 (PI31)
PWRN2 Prader-Willi region non-protein coding RNA 2
PXMP4 peroxisomal membrane protein 4, 24kDa
PYGL phosphorylase, glycogen, liver
RAB22A RAB22A, member RAS oncogene family
RAB5C RAB5C, member RAS oncogene family
RAB7A RAB7A, member RAS oncogene family
RABGGTA Rab geranylgeranyltransferase, alpha subunit
RALY RALY heterogeneous nuclear ribonucleoprotein
RANBP10 RAN binding protein 10
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
RDH12 retinol dehydrogenase 12 (all-trans/9-cis/11-cis)
RGS7 regulator of G-protein signaling 7
RNASE12 ribonuclease, RNase A family, 12 (non-active)
RNF40 ring finger protein 40, E3 ubiquitin protein ligase
RNGTT RNA guanylyltransferase and 5'-phosphatase
RPE65 retinal pigment epithelium-specific protein 65kDa
RPN2 ribophorin II
RPTOR regulatory associated protein of MTOR, complex 1
RSPH3 radial spoke 3 homolog (Chlamydomonas)
RTFDC1 replication termination factor 2 domain containing 1
RUNDC3A RUN domain containing 3A
SDCBP2 syndecan binding protein (syntenin) 2
SDR9C7 short chain dehydrogenase/reductase family 9C, member 7
SEPT9 septin 9
SERAC1 serine active site containing 1
SLC35G2 solute carrier family 35, member G2
SLC52A3 solute carrier family 52 (riboflavin transporter), member 3
SLC5A1 solute carrier family 5 (sodium/glucose cotransporter), member 1
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2
SPIN4 spindlin family, member 4
SPPL3 signal peptide peptidase like 3
SPTLC3 serine palmitoyltransferase, long chain base subunit 3
SRP68 signal recognition particle 68kDa
STARD4 StAR-related lipid transfer (START) domain containing 4
STK35 serine/threonine kinase 35
STRN3 striatin, calmodulin binding protein 3
SZT2 seizure threshold 2 homolog (mouse)
TAS2R60 taste receptor, type 2, member 60
TBC1D10A TBC1 domain family, member 10A
TFG TRK-fused gene
TGM1 transglutaminase 1
TM9SF4 transmembrane 9 superfamily protein member 4
TMCO2 transmembrane and coiled-coil domains 2
TMEM45B transmembrane protein 45B
TMEM86A transmembrane protein 86A
TMUB2 transmembrane and ubiquitin-like domain containing 2
TOX4 TOX high mobility group box family member 4
TRAF7 TNF receptor-associated factor 7, E3 ubiquitin protein ligase
TREX2 three prime repair exonuclease 2
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein
TTI1 TELO2 interacting protein 1
TTTY16 testis-specific transcript, Y-linked 16 (non-protein coding)
TUBG1 tubulin, gamma 1
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1
ULBP3 UL16 binding protein 3
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1
USP15 ubiquitin specific peptidase 15
USP32 ubiquitin specific peptidase 32
VN1R2 vomeronasal 1 receptor 2
VNN3 vanin 3
VPS25 vacuolar protein sorting 25 homolog (S. cerevisiae)
VTA1 vesicle (multivesicular body) trafficking 1
WDR53 WD repeat domain 53
WFDC12 WAP four-disulfide core domain 12
WFDC5 WAP four-disulfide core domain 5
XKRX XK, Kell blood group complex subunit-related, X-linked
ZC4H2 zinc finger, C4H2 domain containing
ZNF185 zinc finger protein 185 (LIM domain)
ZNF720 zinc finger protein 720
ZSWIM1 zinc finger, SWIM-type containing 1

low expression

Symbol Name
SCRIB scribbled planar cell polarity protein
SDCBP syndecan binding protein (syntenin)