Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-A4CB-01A-11R-A24Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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309 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CQ-A4CB-01A-11R-A24Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA11P ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene
ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6
ADGRA3 adhesion G protein-coupled receptor A3
AIDA axin interactor, dorsalization associated
ANGPTL4 angiopoietin-like 4
ANKRD13D ankyrin repeat domain 13 family, member D
ANO1 anoctamin 1, calcium activated chloride channel
AOX2P aldehyde oxidase 2 pseudogene
AREG amphiregulin
ARHGAP11A Rho GTPase activating protein 11A
ARHGAP11B Rho GTPase activating protein 11B
ARHGAP29 Rho GTPase activating protein 29
ATG2A autophagy related 2A
ATP13A3 ATPase type 13A3
AUNIP aurora kinase A and ninein interacting protein
AURKA aurora kinase A
BCCIP BRCA2 and CDKN1A interacting protein
BMS1 BMS1 ribosome biogenesis factor
BRMS1 breast cancer metastasis suppressor 1
C10ORF67 chromosome 10 open reading frame 67
C11ORF80 chromosome 11 open reading frame 80
C12ORF43 chromosome 12 open reading frame 43
C2ORF83 chromosome 2 open reading frame 83
C9ORF47 chromosome 9 open reading frame 47
CAB39 calcium binding protein 39
CADM3 cell adhesion molecule 3
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2
CAPN2 calpain 2, (m/II) large subunit
CCBE1 collagen and calcium binding EGF domains 1
CCDC88A coiled-coil domain containing 88A
CCL16 chemokine (C-C motif) ligand 16
CCNJ cyclin J
CCNYL1 cyclin Y-like 1
CD276 CD276 molecule
CDC27 cell division cycle 27
CDC7 cell division cycle 7
CDCA5 cell division cycle associated 5
CDKL2 cyclin-dependent kinase-like 2 (CDC2-related kinase)
CENPE centromere protein E, 312kDa
CENPK centromere protein K
CENPO centromere protein O
CEP290 centrosomal protein 290kDa
CEP57L1 centrosomal protein 57kDa-like 1
CKAP2L cytoskeleton associated protein 2-like
COL13A1 collagen, type XIII, alpha 1
COL17A1 collagen, type XVII, alpha 1
CORO2B coronin, actin binding protein, 2B
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like)
CSF2 colony stimulating factor 2 (granulocyte-macrophage)
CSF3 colony stimulating factor 3 (granulocyte)
CT62 cancer/testis antigen 62
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1
CWC27 CWC27 spliceosome-associated protein homolog (S. cerevisiae)
CYP27B1 cytochrome P450, family 27, subfamily B, polypeptide 1
DCLK3 doublecortin-like kinase 3
DCLRE1A DNA cross-link repair 1A
DCLRE1B DNA cross-link repair 1B
DDX20 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
DEPDC1B DEP domain containing 1B
DHX29 DEAH (Asp-Glu-Ala-His) box polypeptide 29
DIMT1 DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)
DISP2 dispatched homolog 2 (Drosophila)
DKK1 dickkopf WNT signaling pathway inhibitor 1
DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding)
DLEU2L deleted in lymphocytic leukemia 2-like
DNAJB11 DnaJ (Hsp40) homolog, subfamily B, member 11
DNAJB8 DnaJ (Hsp40) homolog, subfamily B, member 8
DPF2 D4, zinc and double PHD fingers family 2
DPP3 dipeptidyl-peptidase 3
DPPA2 developmental pluripotency associated 2
DSCAM Down syndrome cell adhesion molecule
EDRF1 erythroid differentiation regulatory factor 1
EHD1 EH-domain containing 1
ENC1 ectodermal-neural cortex 1 (with BTB domain)
ERCC8 excision repair cross-complementation group 8
EXO5 exonuclease 5
EXOSC9 exosome component 9
F3 coagulation factor III (thromboplastin, tissue factor)
FADD Fas (TNFRSF6)-associated via death domain
FAF2 Fas associated factor family member 2
FAM204A family with sequence similarity 204, member A
FAM35DP family with sequence similarity 35, member A pseudogene
FAM74A3 family with sequence similarity 74, member A3
FBXL19-AS1 FBXL19 antisense RNA 1 (head to head)
FBXO45 F-box protein 45
FBXO47 F-box protein 47
FJX1 four jointed box 1 (Drosophila)
FOXD1 forkhead box D1
FST follistatin
FZD5 frizzled class receptor 5
GABPB1 GA binding protein transcription factor, beta subunit 1
GANC glucosidase, alpha; neutral C
GJC1 gap junction protein, gamma 1, 45kDa
GPBP1 GC-rich promoter binding protein 1
GPR39 G protein-coupled receptor 39
GPR89A G protein-coupled receptor 89A
GTF2H2C GTF2H2 family member C
HAS2 hyaluronan synthase 2
HJURP Holliday junction recognition protein
HMGXB3 HMG box domain containing 3
IFNL1 interferon, lambda 1
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2
IKBIP IKBKB interacting protein
IL1RAP interleukin 1 receptor accessory protein
IL24 interleukin 24
IL31RA interleukin 31 receptor A
IL7R interleukin 7 receptor
IPO11 importin 11
IQCG IQ motif containing G
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
ITPK1-AS1 ITPK1 antisense RNA 1
ITSN1 intersectin 1 (SH3 domain protein)
KDELC1 KDEL (Lys-Asp-Glu-Leu) containing 1
KDM2A lysine (K)-specific demethylase 2A
KIAA0226 KIAA0226
KIF14 kinesin family member 14
KIF18A kinesin family member 18A
KIF1BP KIF1 binding protein
KIF20B kinesin family member 20B
KIF23 kinesin family member 23
KIF2A kinesin heavy chain member 2A
KLC2 kinesin light chain 2
KLHL4 kelch-like family member 4
LAMB3 laminin, beta 3
LAMC2 laminin, gamma 2
LHX1 LIM homeobox 1
LIAS lipoic acid synthetase
LMLN leishmanolysin-like (metallopeptidase M8 family)
LOC285740 uncharacterized LOC285740
LRRN4 leucine rich repeat neuronal 4
LUZP1 leucine zipper protein 1
LYAR Ly1 antibody reactive
M1AP meiosis 1 associated protein
MAB21L2 mab-21-like 2 (C. elegans)
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4
MAPKBP1 mitogen-activated protein kinase binding protein 1
MCCD1 mitochondrial coiled-coil domain 1
MCM8 minichromosome maintenance complex component 8
MIER3 mesoderm induction early response 1, family member 3
MMP21 matrix metallopeptidase 21
MOCS2 molybdenum cofactor synthesis 2
MORN4 MORN repeat containing 4
MRPL11 mitochondrial ribosomal protein L11
MSANTD3 Myb/SANT-like DNA-binding domain containing 3
MTBP MDM2 binding protein
MTX3 metaxin 3
MUS81 MUS81 structure-specific endonuclease subunit
MYO19 myosin XIX
MYO1B myosin IB
NAV3 neuron navigator 3
NCAPG non-SMC condensin I complex, subunit G
NCBP2 nuclear cap binding protein subunit 2, 20kDa
NDUFAF2 NADH dehydrogenase (ubiquinone) complex I, assembly factor 2
NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)
NGFR nerve growth factor receptor
NHLH1 nescient helix loop helix 1
NIPAL3 NIPA-like domain containing 3
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae)
NOLC1 nucleolar and coiled-body phosphoprotein 1
NT5E 5'-nucleotidase, ecto (CD73)
OIT3 oncoprotein induced transcript 3
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR2C1 olfactory receptor, family 2, subfamily C, member 1
OR4D1 olfactory receptor, family 4, subfamily D, member 1
OR51E2 olfactory receptor, family 51, subfamily E, member 2
OR5AK2 olfactory receptor, family 5, subfamily AK, member 2
ORAOV1 oral cancer overexpressed 1
ORC6 origin recognition complex, subunit 6
OSTCP1 oligosaccharyltransferase complex subunit pseudogene 1
P3H2 prolyl 3-hydroxylase 2
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2
PALM2-AKAP2 PALM2-AKAP2 readthrough
PAPOLB poly(A) polymerase beta (testis specific)
PC pyruvate carboxylase
PCGF6 polycomb group ring finger 6
PCYT1A phosphate cytidylyltransferase 1, choline, alpha
PDE8A phosphodiesterase 8A
PDPN podoplanin
PEAR1 platelet endothelial aggregation receptor 1
PELO pelota homolog (Drosophila)
PGAM5 phosphoglycerate mutase family member 5
PHLDA1 pleckstrin homology-like domain, family A, member 1
PI16 peptidase inhibitor 16
PIP5K1P1 phosphatidylinositol-4-phosphate 5-kinase, type I, pseudogene 1
PLAU plasminogen activator, urokinase
PLK1 polo-like kinase 1
PLSCR1 phospholipid scramblase 1
POC5 POC5 centriolar protein
POM121L9P POM121 transmembrane nucleoporin-like 9, pseudogene
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme
PPP2R5B protein phosphatase 2, regulatory subunit B', beta
PPP4R4 protein phosphatase 4, regulatory subunit 4
PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1
PSG1 pregnancy specific beta-1-glycoprotein 1
PSG6 pregnancy specific beta-1-glycoprotein 6
PSG8 pregnancy specific beta-1-glycoprotein 8
PSMB2 proteasome (prosome, macropain) subunit, beta type, 2
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
PTAFR platelet-activating factor receptor
PTBP1 polypyrimidine tract binding protein 1
PTGDR prostaglandin D2 receptor (DP)
PTGIS prostaglandin I2 (prostacyclin) synthase
PTPN12 protein tyrosine phosphatase, non-receptor type 12
PXN paxillin
RAB1B RAB1B, member RAS oncogene family
RAB29 RAB29, member RAS oncogene family
RAD9A RAD9 homolog A (S. pombe)
RAP1GAP2 RAP1 GTPase activating protein 2
RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RBBP8 retinoblastoma binding protein 8
RBM22 RNA binding motif protein 22
RCE1 Ras converting CAAX endopeptidase 1
RDH8 retinol dehydrogenase 8 (all-trans)
RFC4 replication factor C (activator 1) 4, 37kDa
RP1L1 retinitis pigmentosa 1-like 1
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1
RRP1B ribosomal RNA processing 1B
S1PR3 sphingosine-1-phosphate receptor 3
SCLT1 sodium channel and clathrin linker 1
SDHAP1 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1
SENP5 SUMO1/sentrin specific peptidase 5
SERPINA13P serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 13, pseudogene
SF1 splicing factor 1
SF3A3 splicing factor 3a, subunit 3, 60kDa
SF3B2 splicing factor 3b, subunit 2, 145kDa
SFR1 SWI5-dependent recombination repair 1
SFRP4 secreted frizzled-related protein 4
SGTB small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
SH2D5 SH2 domain containing 5
SHANK2 SH3 and multiple ankyrin repeat domains 2
SHANK3 SH3 and multiple ankyrin repeat domains 3
SKA2 spindle and kinetochore associated complex subunit 2
SKIV2L2 superkiller viralicidic activity 2-like 2 (S. cerevisiae)
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1
SLC38A9 solute carrier family 38, member 9
SLC7A6 solute carrier family 7 (amino acid transporter light chain, y+L system), member 6
SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
SMCO2 single-pass membrane protein with coiled-coil domains 2
SMIM15 small integral membrane protein 15
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa
SNORA10 small nucleolar RNA, H/ACA box 10
SNORA12 small nucleolar RNA, H/ACA box 12
SNORA47 small nucleolar RNA, H/ACA box 47
SNORA52 small nucleolar RNA, H/ACA box 52
SNORA70 small nucleolar RNA, H/ACA box 70
SNORA81 small nucleolar RNA, H/ACA box 81
SNX15 sorting nexin 15
SQRDL sulfide quinone reductase-like (yeast)
SREK1 splicing regulatory glutamine/lysine-rich protein 1
SREK1IP1 SREK1-interacting protein 1
SRSF1 serine/arginine-rich splicing factor 1
SUPT20HL2 suppressor of Ty 20 homolog (S. cerevisiae)-like 2
SYT12 synaptotagmin XII
TBC1D29 TBC1 domain family, member 29
TBP TATA box binding protein
TBPL2 TATA box binding protein like 2
TCERG1 transcription elongation regulator 1
TCF23 transcription factor 23
TCOF1 Treacher Collins-Franceschetti syndrome 1
TDO2 tryptophan 2,3-dioxygenase
TGFA transforming growth factor, alpha
THEG theg spermatid protein
TICAM2 toll-like receptor adaptor molecule 2
TIPIN TIMELESS interacting protein
TJAP1 tight junction associated protein 1 (peripheral)
TMEM14E transmembrane protein 14E
TMEM41A transmembrane protein 41A
TNFAIP3 tumor necrosis factor, alpha-induced protein 3
TRA2B transformer 2 beta homolog (Drosophila)
TRABD2A TraB domain containing 2A
TRAPPC13 trafficking protein particle complex 13
TRIM23 tripartite motif containing 23
TRMT6 tRNA methyltransferase 6
TSHB thyroid stimulating hormone, beta
TTC13 tetratricopeptide repeat domain 13
TTTY2 testis-specific transcript, Y-linked 2 (non-protein coding)
TYW1B tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1
UBA6 ubiquitin-like modifier activating enzyme 6
UBE2G2 ubiquitin-conjugating enzyme E2G 2
UHRF1 ubiquitin-like with PHD and ring finger domains 1
USP50 ubiquitin specific peptidase 50
UTP15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)
VEGFC vascular endothelial growth factor C
VENTX VENT homeobox
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene)
WDR53 WD repeat domain 53
WFDC10A WAP four-disulfide core domain 10A
WHSC1 Wolf-Hirschhorn syndrome candidate 1
XDH xanthine dehydrogenase
YIF1A Yip1 interacting factor homolog A (S. cerevisiae)
ZCCHC4 zinc finger, CCHC domain containing 4
ZGRF1 zinc finger, GRF-type containing 1
ZNF283 zinc finger protein 283
ZNF334 zinc finger protein 334
ZNF530 zinc finger protein 530
ZNF549 zinc finger protein 549
ZNF75A zinc finger protein 75a

low expression

Symbol Name
ADNP2 ADNP homeobox 2
EXOC4 exocyst complex component 4
PARD6G par-6 family cell polarity regulator gamma