Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-6493-01A-11R-1873-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Head and Neck squamous cell carcinoma_HNSC (The Cancer Genome Atlas)
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261 genes with high or low expression in Head and Neck squamous cell carcinoma_HNSC_TCGA-CR-6493-01A-11R-1873-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACER3 alkaline ceramidase 3
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1
ADAP1 ArfGAP with dual PH domains 1
AGO2 argonaute RISC catalytic component 2
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4
ALG8 ALG8, alpha-1,3-glucosyltransferase
AMOTL1 angiomotin like 1
AMOTL2 angiomotin like 2
ANAPC1 anaphase promoting complex subunit 1
ANLN anillin, actin binding protein
ANXA2P1 annexin A2 pseudogene 1
AP2B1 adaptor-related protein complex 2, beta 1 subunit
APCDD1L adenomatosis polyposis coli down-regulated 1-like
APLN apelin
ARHGAP29 Rho GTPase activating protein 29
ARHGAP42 Rho GTPase activating protein 42
ARID3A AT rich interactive domain 3A (BRIGHT-like)
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
ASCC3 activating signal cointegrator 1 complex subunit 3
AXL AXL receptor tyrosine kinase
BCAR3 breast cancer anti-estrogen resistance 3
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3
BOP1 block of proliferation 1
BUB1 BUB1 mitotic checkpoint serine/threonine kinase
C11ORF80 chromosome 11 open reading frame 80
C1ORF74 chromosome 1 open reading frame 74
C20ORF144 chromosome 20 open reading frame 144
C9ORF129 chromosome 9 open reading frame 129
CA9 carbonic anhydrase IX
CABIN1 calcineurin binding protein 1
CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2
CAPN1 calpain 1, (mu/I) large subunit
CAV1 caveolin 1, caveolae protein, 22kDa
CAV2 caveolin 2
CCBE1 collagen and calcium binding EGF domains 1
CCDC8 coiled-coil domain containing 8
CCNA2 cyclin A2
CDCA2 cell division cycle associated 2
CFAP97 cilia and flagella associated protein 97
CHRNB1 cholinergic receptor, nicotinic, beta 1 (muscle)
CKAP2L cytoskeleton associated protein 2-like
CNTNAP3 contactin associated protein-like 3
COX10 COX10 heme A:farnesyltransferase cytochrome c oxidase assembly factor
CRYBB2 crystallin, beta B2
CTBP2 C-terminal binding protein 2
CYTH3 cytohesin 3
DCTD dCMP deaminase
DDIT4 DNA-damage-inducible transcript 4
DENND2A DENN/MADD domain containing 2A
DHTKD1 dehydrogenase E1 and transketolase domain containing 1
DHX33 DEAH (Asp-Glu-Ala-His) box polypeptide 33
DIAPH3 diaphanous-related formin 3
DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6
DOCK5 dedicator of cytokinesis 5
DOCK7 dedicator of cytokinesis 7
DPP3 dipeptidyl-peptidase 3
DPP9 dipeptidyl-peptidase 9
DSCAM Down syndrome cell adhesion molecule
DUSP4 dual specificity phosphatase 4
EHD1 EH-domain containing 1
EHD2 EH-domain containing 2
EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4
ELAVL2 ELAV like neuron-specific RNA binding protein 2
ERCC2 excision repair cross-complementation group 2
ERF Ets2 repressor factor
EVC2 Ellis van Creveld syndrome 2
FAM83H family with sequence similarity 83, member H
FAT1 FAT atypical cadherin 1
FER fer (fps/fes related) tyrosine kinase
FIGN fidgetin
FLII flightless I homolog (Drosophila)
FRMD5 FERM domain containing 5
FST follistatin
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase)
GANC glucosidase, alpha; neutral C
GDNF glial cell derived neurotrophic factor
GEMIN4 gem (nuclear organelle) associated protein 4
GJB3 gap junction protein, beta 3, 31kDa
GNAS-AS1 GNAS antisense RNA 1
GPR176 G protein-coupled receptor 176
GPR89B G protein-coupled receptor 89B
GSG2 germ cell associated 2 (haspin)
GSPT1 G1 to S phase transition 1
GUCD1 guanylyl cyclase domain containing 1
H19 H19, imprinted maternally expressed transcript (non-protein coding)
HES7 hes family bHLH transcription factor 7
HGH1 HGH1 homolog (S. cerevisiae)
HIC2 hypermethylated in cancer 2
HK2 hexokinase 2
HMGA2 high mobility group AT-hook 2
HR hair growth associated
HSF2BP heat shock transcription factor 2 binding protein
IFNA16 interferon, alpha 16
IFNA17 interferon, alpha 17
IFNA2 interferon, alpha 2
IFNA21 interferon, alpha 21
IFNA5 interferon, alpha 5
IFNA7 interferon, alpha 7
IFNA8 interferon, alpha 8
IFNW1 interferon, omega 1
IGFBP3 insulin-like growth factor binding protein 3
INCENP inner centromere protein antigens 135/155kDa
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa
IPO7 importin 7
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3
KBTBD7 kelch repeat and BTB (POZ) domain containing 7
KCNS1 potassium voltage-gated channel, modifier subfamily S, member 1
KIAA0100 KIAA0100
KIF14 kinesin family member 14
KIF17 kinesin family member 17
KIF23 kinesin family member 23
L1CAM L1 cell adhesion molecule
LAMA5 laminin, alpha 5
LDHA lactate dehydrogenase A
LDOC1 leucine zipper, down-regulated in cancer 1
LHX1 LIM homeobox 1
LINC00113 long intergenic non-protein coding RNA 113
LINC00301 long intergenic non-protein coding RNA 301
LINC00346 long intergenic non-protein coding RNA 346
LMNB2 lamin B2
LOC494141 solute carrier family 25, member 51 pseudogene
LOC727896 cysteine and histidine-rich domain (CHORD) containing 1 pseudogene
LPAR3 lysophosphatidic acid receptor 3
LRFN4 leucine rich repeat and fibronectin type III domain containing 4
LRRC59 leucine rich repeat containing 59
LRRN4 leucine rich repeat neuronal 4
MAPK1 mitogen-activated protein kinase 1
MCTS2P malignant T cell amplified sequence 2, pseudogene
MFAP5 microfibrillar associated protein 5
MIB2 mindbomb E3 ubiquitin protein ligase 2
MICALCL MICAL C-terminal like
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MISP mitotic spindle positioning
MMS19 MMS19 nucleotide excision repair homolog (S. cerevisiae)
MOB3A MOB kinase activator 3A
MROH6 maestro heat-like repeat family member 6
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
MTMR2 myotubularin related protein 2
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYBBP1A MYB binding protein (P160) 1a
MYO10 myosin X
MYO1B myosin IB
MYO1C myosin IC
MYO3B myosin IIIB
MYOF myoferlin
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NCAPG non-SMC condensin I complex, subunit G
NDC1 NDC1 transmembrane nucleoporin
NDRG1 N-myc downstream regulated 1
NEU3 sialidase 3 (membrane sialidase)
NOLC1 nucleolar and coiled-body phosphoprotein 1
NPM3 nucleophosmin/nucleoplasmin 3
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
NT5E 5'-nucleotidase, ecto (CD73)
NTSR1 neurotensin receptor 1 (high affinity)
NUDCD1 NudC domain containing 1
OR2D3 olfactory receptor, family 2, subfamily D, member 3
OSBPL5 oxysterol binding protein-like 5
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form)
PANX1 pannexin 1
PCDHGA4 protocadherin gamma subfamily A, 4
PDLIM2 PDZ and LIM domain 2 (mystique)
PEX26 peroxisomal biogenesis factor 26
PFAS phosphoribosylformylglycinamidine synthase
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
PFKP phosphofructokinase, platelet
PICALM phosphatidylinositol binding clathrin assembly protein
PITRM1 pitrilysin metallopeptidase 1
PKP2 plakophilin 2
PLCB3 phospholipase C, beta 3 (phosphatidylinositol-specific)
PLEC plectin
PLK1 polo-like kinase 1
PLSCR3 phospholipid scramblase 3
POLR3A polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
POTEM POTE ankyrin domain family, member M
PPM1F protein phosphatase, Mg2+/Mn2+ dependent, 1F
PROSER2 proline and serine rich 2
PRPF8 pre-mRNA processing factor 8
PRR11 proline rich 11
PSG3 pregnancy specific beta-1-glycoprotein 3
PSG5 pregnancy specific beta-1-glycoprotein 5
PTBP1 polypyrimidine tract binding protein 1
PTPN14 protein tyrosine phosphatase, non-receptor type 14
PWP2 PWP2 periodic tryptophan protein homolog (yeast)
RAB11FIP5 RAB11 family interacting protein 5 (class I)
RAB3B RAB3B, member RAS oncogene family
RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1
RCAN3 RCAN family member 3
RCC1 regulator of chromosome condensation 1
RFX2 regulatory factor X, 2 (influences HLA class II expression)
RHOBTB2 Rho-related BTB domain containing 2
RP1L1 retinitis pigmentosa 1-like 1
RPS6KA4 ribosomal protein S6 kinase, 90kDa, polypeptide 4
RRAS2 related RAS viral (r-ras) oncogene homolog 2
RRP1B ribosomal RNA processing 1B
SFTA1P surfactant associated 1, pseudogene
SH2D3A SH2 domain containing 3A
SH2D5 SH2 domain containing 5
SH3TC2 SH3 domain and tetratricopeptide repeats 2
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
SLC38A1 solute carrier family 38, member 1
SLC38A4 solute carrier family 38, member 4
SLC39A10 solute carrier family 39 (zinc transporter), member 10
SLC43A3 solute carrier family 43, member 3
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5
SLC7A6 solute carrier family 7 (amino acid transporter light chain, y+L system), member 6
SLC7A6OS solute carrier family 7, member 6 opposite strand
SLCO4A1 solute carrier organic anion transporter family, member 4A1
SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
SMURF2 SMAD specific E3 ubiquitin protein ligase 2
SNORA45A small nucleolar RNA, H/ACA box 45A
SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like
SRP72 signal recognition particle 72kDa
STIP1 stress-induced phosphoprotein 1
STK3 serine/threonine kinase 3
SWAP70 SWAP switching B-cell complex 70kDa subunit
SYT16 synaptotagmin XVI
TBC1D16 TBC1 domain family, member 16
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor)
TGFBRAP1 transforming growth factor, beta receptor associated protein 1
THBS1 thrombospondin 1
TLL1 tolloid-like 1
TMED10P1 transmembrane emp24-like trafficking protein 10 (yeast) pseudogene 1
TMEM133 transmembrane protein 133
TOMM34 translocase of outer mitochondrial membrane 34
TOP3B topoisomerase (DNA) III beta
TRIM44 tripartite motif containing 44
TSPAN4 tetraspanin 4
TSPAN5 tetraspanin 5
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
TUBB6 tubulin, beta 6 class V
TUBGCP4 tubulin, gamma complex associated protein 4
TXNDC2 thioredoxin domain containing 2 (spermatozoa)
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1
UPK3B uroplakin 3B
USP24 ubiquitin specific peptidase 24
VGLL1 vestigial-like family member 1
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene)
WDR35 WD repeat domain 35
WDR4 WD repeat domain 4
WWC2 WW and C2 domain containing 2
XPO7 exportin 7
YDJC YdjC homolog (bacterial)
ZDHHC8 zinc finger, DHHC-type containing 8
ZFP69B ZFP69 zinc finger protein B
ZNF777 zinc finger protein 777
ZWILCH zwilch kinetochore protein

low expression

Symbol Name
CHFR checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase
EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1
RAB2B RAB2B, member RAS oncogene family
TBC1D10A TBC1 domain family, member 10A
TOX4 TOX high mobility group box family member 4
TRAPPC2 trafficking protein particle complex 2
ZNF136 zinc finger protein 136
ZNF20 zinc finger protein 20
ZNF44 zinc finger protein 44
ZNF558 zinc finger protein 558